Gene Symbol | HR |
---|---|
Entrez Id | 55806 |
Position | chr8:21971932..21988565 |
Description | hair growth associated |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs10090648 | 8:21975006 | A/G | HR | intron | 0.958 | 0.99870 | 0.0167 | 0.9359 | ![]() | 5 |
rs10110714 | 8:21974991 | T/C | HR | intron | 0.958 | 1.00120 | 0.0167 | 0.9431 | ![]() | 5 |
rs112173147 | 8:21974427 | T/G | HR | coding-synon,intron | 0.773 | 0.97083 | 0.0225 | 0.1881 | ![]() | 2b |
rs112418122 | 8:21981778 | T/C | HR | intron | 0.742 | 0.97142 | 0.0221 | 0.1909 | ![]() | 6 |
rs113170816 | 8:21988932 | T/C | HR | near-gene-5 | 0.731 | 0.98413 | 0.0232 | 0.491 | ![]() | 3a |
rs116914003 | 8:21989597 | T/C | HR | near-gene-5 | 0.833 | 0.94261 | 0.0409 | 0.1489 | ![]() | 5 |
rs117638500 | 8:21977705 | T/C | HR | intron | 0.902 | 0.93183 | 0.0492 | 0.1518 | ![]() | 5 |
rs12675375 | 8:21984945 | T/C | HR | missense | 0.870 | 0.98521 | 0.0120 | 0.217 | ![]() | 5 |
rs12675745 | 8:21984650 | A/G | HR | coding-synon | 0.906 | 0.99810 | 0.0114 | 0.869 | ![]() | 5 |
rs12677278 | 8:21976872 | A/G | HR | intron | 0.937 | 0.99422 | 0.0109 | 0.5966 | ![]() | 6 |
rs12681529 | 8:21984488 | A/G | HR | intron | 0.870 | 0.98403 | 0.0120 | 0.182 | ![]() | 5 |
rs13256571 | 8:21981952 | T/C | HR | intron | 0.908 | 0.96977 | 0.0202 | 0.1282 | ![]() | 1f |
rs13260888 | 8:21983807 | C/G | HR | intron | 0.864 | 0.98521 | 0.0118 | 0.2074 | ![]() | 5 |
rs28384266 | 8:21989174 | T/G | HR | near-gene-5 | 0.716 | 0.98896 | 0.0189 | 0.5567 | ![]() | 5 |
rs35143513 | 8:21977101 | T/C | HR | intron | 0.874 | 1.01542 | 0.0310 | 0.6204 | ![]() | 7 |
rs4391429 | 8:21989848 | A/G | HR | near-gene-5 | 0.741 | 0.99820 | 0.0203 | 0.9313 | ![]() | 2b |
rs57903149 | 8:21978469 | A/G | HR | coding-synon | 0.825 | 1.03873 | 0.0417 | 0.363 | ![]() | 5 |
rs58080661 | 8:21978578 | A/G | HR | coding-synon | 0.758 | 1.03562 | 0.0470 | 0.4564 | ![]() | 5 |
rs59952427 | 8:21976381 | T/C | HR | intron | 0.821 | 1.01776 | 0.0408 | 0.6659 | ![]() | 5 |
rs6557829 | 8:21973970 | A/C | HR | intron | 0.963 | 0.99452 | 0.0109 | 0.6176 | ![]() | 1f |
rs6557830 | 8:21974032 | A/C | HR | intron | 0.974 | 1.00763 | 0.0107 | 0.4785 | ![]() | 4 |
rs6557831 | 8:21975211 | A/G | HR | intron | 0.965 | 1.00914 | 0.0108 | 0.4005 | ![]() | 5 |
rs6557841 | 8:21988515 | A/C | HR | untranslated-5 | 0.889 | 0.99830 | 0.0115 | 0.8847 | ![]() | 4 |
rs6990781 | 8:21987292 | C/G | HR | intron | 0.897 | 0.99940 | 0.0114 | 0.9588 | ![]() | 4 |
rs6992008 | 8:21985767 | A/T | HR | intron | 0.869 | 1.01593 | 0.0120 | 0.1879 | ![]() | 4 |
rs6994872 | 8:21972973 | T/G | HR | untranslated-3 | 0.967 | 0.99621 | 0.0109 | 0.7285 | ![]() | 1f |
rs7006229 | 8:21976625 | A/G | HR | intron | 0.789 | 1.04781 | 0.0447 | 0.2961 | ![]() | 5 |
rs7014851 | 8:21976710 | T/C | HR | missense | 0.861 | 1.05401 | 0.0466 | 0.2587 | ![]() | 5 |
rs73547602 | 8:21975312 | A/G | HR | intron | 0.854 | 1.04279 | 0.0444 | 0.3446 | ![]() | 4 |
rs73549513 | 8:21980572 | A/C | HR | intron | 0.844 | 1.03946 | 0.0456 | 0.3956 | ![]() | 5 |
rs73549523 | 8:21984765 | T/C | HR | missense | 0.744 | 1.02727 | 0.0224 | 0.2303 | ![]() | 5 |
rs73549539 | 8:21990313 | A/C | HR | near-gene-5 | 0.723 | 1.01593 | 0.0233 | 0.4974 | ![]() | 5 |
rs74596676 | 8:21982991 | T/C | HR | missense | 0.742 | 0.97015 | 0.0221 | 0.1704 | ![]() | 5 |
rs75100696 | 8:21974266 | C/G | HR | intron | 0.638 | 0.98187 | 0.0344 | 0.5942 | ![]() | 4 |
rs75600662 | 8:21976387 | T/C | HR | intron | 0.874 | 0.95094 | 0.0474 | 0.2892 | ![]() | 5 |
rs76758185 | 8:21974987 | T/C | HR | intron | 0.760 | 1.03324 | 0.0218 | 0.1338 | ![]() | 5 |
rs77476259 | 8:21975927 | A/G | HR | intron | 0.894 | 0.92570 | 0.0489 | 0.1143 | ![]() | 5 |
rs77689228 | 8:21978734 | A/G | HR | coding-synon | 0.812 | 0.92682 | 0.0590 | 0.1975 | ![]() | 5 |
rs7832020 | 8:21989656 | C/G | HR | near-gene-5 | 0.792 | 1.02798 | 0.0388 | 0.4768 | ![]() | 5 |
rs78396061 | 8:21983265 | A/G | HR | intron | 0.690 | 0.99253 | 0.0457 | 0.8698 | ![]() | 5 |
rs78734184 | 8:21975345 | T/G | HR | intron | 0.906 | 0.93800 | 0.0495 | 0.196 | ![]() | 2b |
rs79800941 | 8:21975865 | T/G | HR | intron | 0.691 | 1.00040 | 0.0484 | 0.9933 | ![]() | 5 |
rs79887822 | 8:21977744 | T/C | HR | intron | 0.902 | 0.93183 | 0.0492 | 0.1518 | ![]() | 5 |
rs80023049 | 8:21982114 | A/C | HR | intron | 0.898 | 0.92941 | 0.0494 | 0.1381 | ![]() | 4 |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!