GSS

Basic Information

Gene Symbol	GSS
Entrez Id	2937
Position	chr20:33516236..33543601
Description	glutathione synthetase
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs140362605	20:33522435	C/G	GSS	intron	0.612	0.99015	0.0637	0.8771		-
rs143930256	20:33526598	A/G	GSS	intron	0.658	0.99084	0.0696	0.8951		-
rs148725577	20:33541355	T/C	GSS	intron	0.665	0.90656	0.0592	0.09763		-
rs150385410	20:33543429	C/G	GSS	intron,near-gene-5	0.869	0.92719	0.0655	0.248		-
rs17310328	20:33540565	T/C	GSS	intron	1.000	1.00310	0.0115	0.7877		5
rs1801310	20:33517014	A/G	GSS	intron	1.000	0.97941	0.0108	0.05484		7
rs2025096	20:33540000	A/G	GSS	intron	1.000	1.03946	0.0132	0.00336		5
rs2065003	20:33538521	A/G	GSS	intron	0.996	0.97726	0.0108	0.03275		6
rs2236270	20:33523155	T/G	GSS	intron	0.998	1.03355	0.0109	0.002504		1f
rs2236271	20:33523840	A/C	GSS	intron	1.000	0.97922	0.0108	0.05235		6
rs2273684	20:33529766	T/G	GSS	intron	1.000	0.97064	0.0106	0.004967		6
rs2378261	20:33538384	T/C	GSS	intron	0.998	0.99720	0.0115	0.8091		7
rs34138151	20:33520975	A/G	GSS	intron	0.844	0.94526	0.0317	0.07553		7
rs34526995	20:33518834	T/G	GSS	intron	0.993	0.99651	0.0205	0.8657		7
rs35024451	20:33542081	C/G	GSS	intron,near-gene-5	1.000	0.99690	0.0115	0.7888		5
rs35291022	20:33537157	A/G	GSS	intron	0.983	1.00421	0.0174	0.8094		5
rs35416056	20:33538214	A/G	GSS	intron	0.853	1.02439	0.0268	0.3684		7
rs4911452	20:33526983	T/C	GSS	intron	0.935	0.98541	0.0110	0.1797		7
rs4911453	20:33541398	T/G	GSS	intron	0.878	1.03283	0.0298	0.278		7
rs6060128	20:33540587	T/C	GSS	intron	1.000	0.99690	0.0115	0.7876		5
rs6088653	20:33520321	T/C	GSS	intron	1.000	0.98039	0.0108	0.06784		7
rs6119545	20:33522869	T/C	GSS	intron	1.000	0.98020	0.0108	0.06468		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information