GRIN1

Basic Information

Gene Symbol	GRIN1
Entrez Id	2902
Position	chr9:140033609..140063214
Description	glutamate receptor, ionotropic, N-methyl D-aspartate 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10747050	9:140055876	A/G	GRIN1	intron	0.724	0.95361	0.0275	0.08448		4
rs10870196	9:140040156	A/G	GRIN1	intron	0.704	0.96271	0.0266	0.153		5
rs10870198	9:140042320	A/G	GRIN1	intron	0.879	1.01826	0.0118	0.1233		5
rs10870200	9:140056070	T/C	GRIN1	intron	0.835	0.97932	0.0120	0.08115		5
rs11146020	9:140033084	C/G	GRIN1	near-gene-5	0.635	0.99681	0.0209	0.8765		5
rs111611214	9:140031735	T/C	GRIN1	near-gene-5	0.622	1.00582	0.0448	0.8963		5
rs111724766	9:140045509	T/G	GRIN1	intron	0.824	0.97346	0.0127	0.03369		4
rs112434899	9:140031719	A/G	GRIN1	near-gene-5	0.622	1.00552	0.0448	0.9022		5
rs117783907	9:140031994	T/G	GRIN1	near-gene-5	0.650	1.00200	0.0214	0.9261		5
rs12238250	9:140046682	A/C	GRIN1	intron	0.714	0.96127	0.0263	0.1325		5
rs138422504	9:140032077	T/C	GRIN1	near-gene-5	0.639	0.98177	0.0456	0.6862		-
rs149867237	9:140050797	A/G	GRIN1	intron	0.619	0.95104	0.0467	0.2827		-
rs182421951	9:140048690	A/C	GRIN1	intron	0.622	0.89101	0.0642	0.072		-
rs2301363	9:140034431	T/C	GRIN1	intron	0.665	0.99720	0.0192	0.8831		5
rs2301364	9:140034535	T/C	GRIN1	intron	0.665	1.00763	0.0194	0.696		5
rs28425205	9:140038101	T/C	GRIN1	intron	0.836	0.98157	0.0119	0.119		5
rs28469605	9:140045859	T/C	GRIN1	intron	0.855	0.97239	0.0123	0.02277		4
rs28482213	9:140038802	T/G	GRIN1	intron	0.728	1.01735	0.0132	0.1914		5
rs28489906	9:140038399	A/G	GRIN1	intron	0.756	1.01826	0.0121	0.1353		5
rs28507734	9:140051015	A/C	GRIN1	intron	0.859	1.02994	0.0122	0.01601		3a
rs28514863	9:140050987	A/G	GRIN1	intron	0.860	1.03004	0.0122	0.01569		4
rs28548538	9:140050870	T/C	GRIN1	intron	0.817	1.02932	0.0125	0.02122		5
rs28681971	9:140047091	T/C	GRIN1	intron	0.859	1.01796	0.0118	0.1326		5
rs28687864	9:140051041	A/G	GRIN1	intron	0.860	1.03004	0.0122	0.01564		4
rs28688581	9:140050544	A/G	GRIN1	intron	0.855	0.98236	0.0118	0.1328		5
rs28770882	9:140048001	A/G	GRIN1	intron	0.856	1.02757	0.0122	0.0261		4
rs34547970	9:140037983	A/G	GRIN1	intron	0.641	0.99880	0.0215	0.9556		5
rs41290007	9:140055703	A/G	GRIN1	intron	0.842	0.96889	0.0124	0.01076		4
rs4880214	9:140035732	A/C	GRIN1	intron	0.758	1.01888	0.0121	0.123		5
rs4880215	9:140037029	A/C	GRIN1	intron	0.846	0.98275	0.0119	0.1423		1f
rs4880216	9:140037261	C/G	GRIN1	intron	0.756	1.01898	0.0121	0.1218		5
rs4880217	9:140048198	A/G	GRIN1	intron	0.718	1.04112	0.0275	0.1428		4
rs4880218	9:140050552	C/G	GRIN1	intron	0.855	1.01786	0.0118	0.1343		5
rs7032504	9:140032197	T/C	GRIN1	near-gene-5	0.796	0.98079	0.0124	0.1193		5
rs72763273	9:140036095	A/G	GRIN1	intron	0.654	0.99890	0.0217	0.959		5
rs73571550	9:140051763	A/G	GRIN1	intron	0.861	1.03025	0.0122	0.01488		5
rs77294171	9:140037946	T/C	GRIN1	intron	0.607	1.03541	0.0241	0.1482		5
rs78889075	9:140036262	A/G	GRIN1	intron	0.601	0.94431	0.0333	0.08578		5
rs9411312	9:140040617	C/G	GRIN1	intron	0.724	0.95791	0.0276	0.1195		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information