GPD1L

Basic Information
Gene SymbolGPD1L
Entrez Id23171
Positionchr3:32148003..32210207
Descriptionglycerol-3-phosphate dehydrogenase 1-like
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs100492233:32189248T/CGPD1Lintron0.9881.006620.01120.55465
rs100493813:32189291T/CGPD1Lintron0.9870.993220.01120.54355
rs100493823:32189391T/CGPD1Lintron0.9840.993120.01120.53556
rs108658403:32194741A/GGPD1Lintron0.9951.031790.01140.0059157
rs108658413:32203420A/GGPD1Lintron0.9881.020410.01070.059285
rs108658423:32203589A/CGPD1Lintron0.9880.979900.01070.058525
rs111294973:32187076A/GGPD1Lintron0.9940.993920.01100.5842b
rs111295013:32206213A/GGPD1Lintron0.9870.981180.01080.079795
rs1113150193:32201974T/GGPD1Lintron0.6771.002900.02270.89947
rs1113182253:32163043A/GGPD1Lintron0.6821.023780.03870.54296
rs1116196763:32204129A/GGPD1Lintron0.9311.007130.01680.67116
rs1121428413:32206837T/GGPD1Lintron0.9651.004810.03680.89637
rs1129425423:32162949A/CGPD1Lintron0.8911.026650.01510.08265
rs1135793953:32150616T/CGPD1Lintron0.9740.982360.02860.53456
rs1138621593:32163253A/GGPD1Lintron0.9710.970350.01740.084536
rs1138951913:32186688A/GGPD1Lintron0.9860.990350.01120.38557
rs1139499203:32186426T/CGPD1Lintron0.9931.006120.01110.57945
rs1145162903:32187872C/GGPD1Lintron0.6800.978340.05550.69286
rs1146061723:32162454T/CGPD1Lintron0.9541.000100.02280.99487
rs1151340803:32176070C/GGPD1Lintron0.6931.023980.04480.5977
rs1156588423:32181502T/CGPD1Lintron0.7860.986890.05540.8126
rs1162328463:32163373T/GGPD1Lintron0.9571.005110.02240.81877
rs1165145523:32173358T/CGPD1Lintron0.8891.080800.04170.062537
rs1167615693:32156917T/CGPD1Lintron0.9790.992130.01670.6354
rs117079083:32208874T/CGPD1Luntranslated-30.9660.970640.01850.10722b
rs117100893:32180635C/GGPD1Lintron0.9761.011060.01460.45016
rs117200833:32196316T/GGPD1Lintron0.9881.034690.01170.0035277
rs119154633:32208039T/CGPD1Luntranslated-30.9961.019900.01750.26173a
rs119155553:32172279T/CGPD1Lintron0.9520.977260.03520.51286
rs119160533:32204397T/CGPD1Lintron0.6990.973950.02360.26337
rs119197003:32204526A/CGPD1Lintron0.9950.979610.01750.24047
rs119223513:32171920A/GGPD1Lintron0.9491.016030.03620.66177
rs119231843:32208121A/CGPD1Luntranslated-30.9960.980980.01750.27464
rs119259623:32157627C/GGPD1Lintron0.9941.022650.01150.050316
rs119264023:32180931A/CGPD1Lintron0.9990.972100.01620.080787
rs119275603:32204700A/GGPD1Lintron0.9951.020510.01750.24627
rs124865163:32172986T/CGPD1Lintron0.9790.991930.01270.52667
rs126338913:32160914A/GGPD1Lintron0.9810.978140.01120.049735
rs126346603:32154508T/CGPD1Lintron0.9941.023470.01150.042816
rs126379693:32181403A/GGPD1Lintron0.9971.009650.01240.43986
rs127151973:32164080A/GGPD1Lintron0.9760.989950.01350.45397
rs127151983:32196023T/CGPD1Lintron0.9861.018880.01090.085714
rs130600573:32157571T/CGPD1Lintron0.9940.977070.01150.04297
rs130614583:32154358A/GGPD1Lintron0.9940.977070.01150.042781f
rs130617523:32154324A/GGPD1Lintron0.9931.012480.01320.34855
rs130619453:32154422T/GGPD1Lintron0.9941.023680.01150.041277
rs130684653:32163029A/GGPD1Lintron0.6291.021730.02570.40236
rs130686213:32183508A/GGPD1Lintron0.9950.992530.01270.55597
rs130687553:32204688A/TGPD1Lintron0.9730.971320.01150.01157
rs130786463:32153722T/CGPD1Lintron0.9790.976090.01160.036467
rs130952433:32147913A/GGPD1Lnear-gene-50.9121.009550.01650.56713a
rs130994753:32153869A/GGPD1Lintron0.8851.031590.01290.01616
rs131007453:32206421A/GGPD1Lintron0.9960.969480.01130.0061227
rs131007983:32206606C/GGPD1Lintron0.9881.020410.01070.059887
rs133151403:32195623A/TGPD1Lintron0.9610.994220.02970.84415
rs133221863:32162287A/GGPD1Lintron0.9541.001200.02280.95666
rs133222243:32195816A/GGPD1Lintron0.9420.992130.02990.79054
rs1384754713:32159311T/GGPD1Lintron0.9010.980000.04850.6773-
rs1387755633:32161582T/CGPD1Lintron0.6141.015320.05340.7758-
rs1402507953:32208908T/CGPD1Luntranslated-30.6771.115390.06420.08921-
rs1408460943:32175575A/GGPD1Lintron0.8100.925520.05980.195-
rs1410977083:32178468A/GGPD1Lintron0.9790.971510.04640.5342-
rs1425382323:32195873A/GGPD1Lintron0.7951.059820.05380.2803-
rs1441152793:32183468T/CGPD1Lintron0.7530.987380.04650.7853-
rs1445299063:32191331T/CGPD1Lintron0.9921.021530.01720.2142-
rs1448986033:32151486T/CGPD1Lintron0.6141.014810.07110.8361-
rs1453575523:32156189T/CGPD1Lintron0.9750.988860.02350.6325-
rs1470823073:32149857A/GGPD1Lintron0.9660.984030.02890.5772-
rs1471977633:32161580C/GGPD1Lintron0.9590.992330.02420.7485-
rs1473523993:32157404T/CGPD1Lintron0.9580.989260.02330.6439-
rs1477008283:32207534T/CGPD1Luntranslated-30.7010.973360.03960.4947-
rs1479117703:32201783T/GGPD1Lintron0.9691.019390.01750.2712-
rs1484881153:32191349A/GGPD1Lintron0.8981.010350.03140.7423-
rs1486440073:32162965A/CGPD1Lintron0.8261.025420.02630.3398-
rs1496315093:32150491A/GGPD1Lintron0.9530.990540.02820.7374-
rs1506523823:32156792T/CGPD1Lintron0.9771.000700.02100.9744-
rs15628783:32182382T/GGPD1Lintron1.0000.972100.01620.080193a
rs170288673:32150903A/GGPD1Lintron0.9901.022350.01150.054424
rs170288823:32153391A/TGPD1Lintron0.9790.992330.01670.64271f
rs170288853:32155048T/CGPD1Lintron0.9931.012270.01320.35311f
rs1807755883:32163286A/GGPD1Lintron0.8940.989550.03640.7739-
rs1814569513:32204141T/GGPD1Lintron0.6020.976870.06980.7375-
rs1822139943:32163153A/GGPD1Lintron0.7450.995910.03550.9083-
rs1836966923:32147983C/GGPD1Lnear-gene-50.7341.028400.06210.6521-
rs1838815873:32162983A/CGPD1Lintron0.7421.095160.06490.1614-
rs1858240403:32163339T/CGPD1Lintron0.8370.995510.04030.9106-
rs1905819043:32163138A/TGPD1Lintron0.6760.991640.02820.767-
rs1909090393:32163275A/TGPD1Lintron0.6471.036860.05750.5293-
rs1912243143:32204887T/CGPD1Lintron0.7240.977070.05350.6649-
rs1925705453:32201928T/GGPD1Lintron0.6250.960790.03620.2692-
rs19756543:32210630T/CGPD1Lnear-gene-30.9510.999600.01110.97077
rs20355483:32153612A/GGPD1Lintron0.9931.023160.01150.046097
rs21228523:32184517A/TGPD1Lintron0.9490.994610.01130.63156
rs21673853:32177268A/TGPD1Lintron0.9700.991440.01470.5587
rs23053613:32200322T/CGPD1Lintron,near-gene-30.9921.031280.01130.0065855
rs23053623:32200233A/GGPD1Lintron,missense0.9850.981870.01090.092125
rs23414213:32182883A/TGPD1Lintron0.9930.992230.01120.48563a
rs23414223:32168199T/CGPD1Lintron0.9651.049280.01930.012567
rs283917013:32202076T/CGPD1Lintron0.7820.975900.01760.16657
rs284068683:32163011A/CGPD1Lintron0.8151.032930.01280.01136
rs284385763:32202080T/GGPD1Lintron0.7750.981380.01620.2457
rs285321393:32163013A/CGPD1Lintron0.9061.022650.01210.063846
rs285452183:32162981A/CGPD1Lintron0.8291.023980.01480.10965
rs286203833:32189801T/CGPD1Lintron0.9800.991930.01120.47175
rs286599723:32163057A/GGPD1Lintron0.6771.055800.01860.0034756
rs286939033:32162995A/CGPD1Lintron0.7211.026850.02660.31865
rs287094763:32184866A/GGPD1Lintron0.9960.980200.01490.1817
rs28803383:32146111T/CGPD1Lnear-gene-50.9991.031790.01780.079253a
rs30878063:32209750T/CGPD1Luntranslated-30.9911.006620.01070.53586
rs340052783:32156005A/GGPD1Lintron0.9940.977460.01150.046615
rs343857693:32170393A/GGPD1Lintron0.9630.981870.01860.3247
rs347305553:32204368A/CGPD1Lintron0.9951.031590.01130.0059337
rs349785713:32186492T/GGPD1Lintron0.9931.006120.01110.587
rs351649623:32184153T/CGPD1Lintron0.9700.984420.01850.39835
rs351759963:32156051A/GGPD1Lintron0.9940.976480.01150.037545
rs352850043:32204338T/CGPD1Lintron0.9970.969480.01130.006177
rs353704673:32187256T/GGPD1Lintron0.9950.992830.01270.56792b
rs355054343:32155764T/GGPD1Lintron0.9941.023470.01150.043035
rs355929243:32154137A/TGPD1Lintron0.9841.018770.01150.10636
rs356423553:32163144A/TGPD1Lintron0.7381.026340.01780.14386
rs356643573:32163316T/GGPD1Lintron0.9630.987280.01740.46076
rs356904203:32176410T/CGPD1Lintron0.9800.995810.01280.74537
rs38981313:32192269C/GGPD1Lintron0.9760.989460.01240.39066
rs39292013:32210440C/GGPD1Lnear-gene-30.9911.006320.01070.5556
rs413329453:32158983T/CGPD1Lintron0.9781.000900.02100.96542b
rs43451043:32157107A/GGPD1Lintron0.9941.023470.01150.04267
rs43954293:32161269C/GGPD1Lintron0.9861.023780.01150.041037
rs45571963:32161470T/CGPD1Lintron0.9831.023980.01150.039456
rs592620483:32191420A/GGPD1Lintron0.9550.998300.03480.96077
rs592731553:32162883T/CGPD1Lintron0.9410.994610.02140.80044
rs595785743:32171256A/GGPD1Lintron0.9601.019390.03520.58667
rs598725393:32171268A/TGPD1Lintron0.9551.017250.03520.62617
rs600693773:32164548A/GGPD1Lintron0.9581.005210.02030.79657
rs602698533:32207015A/GGPD1Lintron0.9960.969770.01130.0066435
rs603875603:32157327T/CGPD1Lintron0.9630.974630.01180.029177
rs608751873:32172666A/CGPD1Lintron0.9791.008330.01270.51476
rs609709143:32172187T/GGPD1Lintron0.9651.002700.01300.83497
rs615197403:32149923T/GGPD1Lintron0.8540.977850.03020.45725
rs67622363:32159162T/CGPD1Lintron0.9871.018060.01080.099225
rs67884363:32207907T/CGPD1Luntranslated-30.9961.030660.01130.0075393a
rs67916033:32208467T/GGPD1Luntranslated-30.9761.019280.01110.084224
rs67995593:32207606A/GGPD1Luntranslated-30.9961.030870.01130.0071995
rs67997283:32207737A/TGPD1Luntranslated-30.9911.029840.01140.0097645
rs68027393:32208431A/GGPD1Luntranslated-30.9911.013390.01070.21154
rs68055183:32147977T/GGPD1Lnear-gene-50.9750.985310.01840.42092b
rs728506433:32169920T/GGPD1Lintron0.9561.018980.03520.59296
rs728506653:32189211C/GGPD1Lintron0.9570.987380.03600.72365
rs728521133:32203786T/CGPD1Lintron0.9670.992130.02980.79027
rs730634433:32165010T/CGPD1Lintron0.8430.968700.05620.57227
rs730634483:32190718A/GGPD1Lintron0.6730.974820.05180.62276
rs73633:32209927A/GGPD1Luntranslated-30.9911.006320.01070.55795
rs738245413:32161884C/GGPD1Lintron0.9550.993120.02060.73937
rs738245473:32170847T/GGPD1Lintron0.9590.997200.02150.89525
rs738245503:32174469T/CGPD1Lintron0.9600.996310.02160.86313a
rs74332093:32157314T/CGPD1Lintron0.9550.975110.01190.034687
rs744109263:32197523T/CGPD1Lintron0.9961.023470.01710.17577
rs752271323:32203802T/CGPD1Lintron0.9951.020410.01750.24827
rs752926773:32185971A/GGPD1Lintron1.0000.974240.01610.10573a
rs752980763:32203632A/GGPD1Lintron0.9951.020410.01750.24835
rs757066463:32186930A/GGPD1Lintron0.7561.002900.04540.94995
rs757107783:32158570A/GGPD1Lintron0.9761.011160.02350.63466
rs757507273:32202212T/CGPD1Lintron0.9950.979810.01750.24326
rs759198453:32154936A/CGPD1Lintron0.9751.011260.02350.63285
rs76164543:32200912T/CGPD1Lintron0.9630.995410.03000.87696
rs76224743:32163384T/CGPD1Lintron0.7221.019900.05080.69777
rs76244163:32199218T/CGPD1Lintron0.9841.018260.01090.096175
rs762446323:32200123A/GGPD1Lintron0.9950.979610.01750.23817
rs764156723:32190925A/GGPD1Lintron0.6730.974820.05180.6236
rs76485153:32197092A/GGPD1Lintron0.9950.968700.01140.005141f
rs764975403:32197915T/GGPD1Lintron0.9961.023470.01710.17584
rs769238423:32203494T/GGPD1Lintron0.9950.980000.01750.24815
rs769250143:32188500A/GGPD1Lintron0.9961.023680.01620.14824
rs769549383:32186009A/GGPD1Lintron1.0001.026440.01610.10592b
rs773086683:32208352T/CGPD1Luntranslated-30.9841.055170.02220.015432b
rs774975463:32205129A/GGPD1Lintron0.9951.020920.01750.23646
rs775197063:32146675T/CGPD1Lnear-gene-50.9790.984130.02860.57566
rs777665143:32204172A/GGPD1Lintron0.9950.980100.01750.24997
rs780496763:32186254A/TGPD1Lintron0.9540.985110.03040.62126
rs781137873:32171115A/GGPD1Lintron0.9590.986490.03570.70265
rs781296053:32207808C/GGPD1Luntranslated-30.8890.955620.02630.08492b
rs782498663:32161956T/CGPD1Lintron0.9450.994020.01990.76266
rs786109053:32171919T/CGPD1Lintron0.9480.989260.03670.76867
rs787986623:32198128A/GGPD1Lintron0.9960.976970.01720.17497
rs790194223:32171657A/GGPD1Lintron0.7900.973850.03070.38955
rs795486773:32208460A/GGPD1Luntranslated-30.8811.030250.02440.22273a
rs9010903:32152475A/CGPD1Lintron0.9821.021120.01120.062527
rs9010923:32151827A/GGPD1Lintron0.9911.022760.01150.049735
rs9010933:32148597A/GGPD1Lintron0.9900.967250.01790.063464
rs93109853:32149329T/CGPD1Lintron0.9751.007330.01750.67576
rs9367873:32152737C/GGPD1Lintron0.9920.977650.01150.04866
rs98113513:32161538T/CGPD1Lintron0.9851.024090.01150.038477
rs98119673:32161991T/CGPD1Lintron0.9821.022650.01160.053436
rs98153043:32202452A/GGPD1Lintron0.9870.980980.01080.077383a
rs98166453:32155438A/CGPD1Lintron0.9940.977070.01150.042827
rs98171293:32162828A/GGPD1Lintron0.9671.023570.01380.09172b
rs98171803:32162997A/CGPD1Lintron0.8021.020920.01600.19385
rs98172713:32162845T/GGPD1Lintron0.9441.000000.02000.9994
rs98173043:32190805A/GGPD1Lintron0.9731.011970.01220.32977
rs98208543:32159831T/GGPD1Lintron0.9910.976770.01150.040715
rs98210333:32196750A/GGPD1Lintron0.9861.019080.01090.081645
rs98266383:32197926A/GGPD1Lintron0.9861.019080.01090.082194
rs98269273:32198083A/GGPD1Lintron0.9871.018770.01090.086274
rs98280863:32157966A/GGPD1Lintron0.9910.976480.01140.037427
rs98331603:32186403T/CGPD1Lintron0.9931.006120.01110.58215
rs98348023:32202383T/CGPD1Lintron0.9871.019390.01090.077454
rs98349853:32202516T/CGPD1Lintron0.9701.011570.01080.28832b
rs98353873:32181761T/CGPD1Lcoding-synon1.0001.028910.01620.078386
rs98354733:32204747A/GGPD1Lintron0.9231.010050.01140.38147
rs98365873:32162683T/CGPD1Lintron0.9560.975900.01410.084035
rs98393053:32208875T/GGPD1Luntranslated-30.9921.021830.01130.055862b
rs98396693:32187943T/GGPD1Lintron0.9941.005720.01100.60296
rs98397023:32188006A/GGPD1Lintron0.9921.005720.01110.60516
rs98416583:32183149A/GGPD1Lintron0.9931.008130.01110.46975
rs98429993:32160240A/GGPD1Lintron0.9900.976970.01150.042596
rs98530703:32202757A/TGPD1Lintron0.9881.020510.01070.058497
rs98542953:32155343T/CGPD1Lintron0.9941.023470.01150.042936
rs98546513:32190484A/CGPD1Lintron0.9751.001400.01120.89947
rs98590333:32187707T/GGPD1Lintron0.9771.004510.01260.72356
rs98595183:32156282T/CGPD1Lintron0.9561.034580.01210.0049227
rs98601313:32156527A/GGPD1Lintron0.9941.023470.01150.042763a
rs98606383:32156940C/GGPD1Lintron0.9940.976970.01140.04164
rs98614043:32183192T/CGPD1Lintron1.0000.971710.01620.077455
rs98704273:32199208A/GGPD1Lintron0.9950.968600.01140.0049545
rs98708513:32158553A/GGPD1Lintron0.9941.023570.01150.042116
rs98745803:32190455A/TGPD1Lintron0.9560.999900.03460.99836
rs98748583:32155739T/CGPD1Lintron0.9940.977070.01150.042755
rs98768513:32187880A/GGPD1Lintron0.9940.993920.01100.58366
rs98802733:32156776T/CGPD1Lintron0.9920.976970.01150.04265
rs98802983:32156807T/CGPD1Lintron0.9850.972870.01160.017845
rs98809003:32171117T/CGPD1Lintron0.9691.013690.01100.21685
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information