GOLGA6L5P

Basic Information

Gene Symbol	GOLGA6L5P
Entrez Id	374650
Position	chr15:85047738..85060078
Description	golgin A6 family-like 5, pseudogene
Gene type	pseudo

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs147019348	15:85052368	A/G	GOLGA6L5P	ncRNA	0.698	1.06769	0.0170	0.0001143		-
rs184555335	15:85053142	T/C	GOLGA6L5P	ncRNA	0.647	0.95695	0.0143	0.002016		-
rs192508624	15:85053124	T/G	GOLGA6L5P	ncRNA	0.638	0.98817	0.0222	0.5915		-
rs62029638	15:85055872	T/C	GOLGA6L5P	ncRNA	0.885	0.93361	0.0131	1.477E-7		7
rs77997984	15:85052329	A/C	GOLGA6L5P	ncRNA	0.883	1.06962	0.0125	6.333E-8		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information