GIGYF2

Basic Information

Gene Symbol	GIGYF2
Entrez Id	26058
Position	chr2:233562015..233725287
Description	GRB10 interacting GYF protein 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10176930	2:233699519	T/C	GIGYF2	intron	0.995	1.05971	0.0141	0.00003826		7
rs10178713	2:233714118	T/C	GIGYF2	intron	0.993	0.94158	0.0131	4.064E-6		7
rs10190211	2:233617312	A/G	GIGYF2	intron	0.975	0.94412	0.0133	0.00001512		6
rs10205801	2:233597196	A/G	GIGYF2	intron,near-gene-5	0.995	0.93249	0.0106	3.601E-11		6
rs10207739	2:233684097	T/C	GIGYF2	intron	0.995	1.05919	0.0141	0.00004366		6
rs10210953	2:233698830	A/G	GIGYF2	intron	0.998	1.06962	0.0108	4.742E-10		5
rs10211596	2:233699415	A/G	GIGYF2	intron	0.999	1.03334	0.0106	0.001984		6
rs10427328	2:233570204	T/C	GIGYF2	intron	0.983	1.06972	0.0109	5.698E-10		6
rs1078323	2:233681512	T/G	GIGYF2	intron	0.997	0.92867	0.0111	2.447E-11		5
rs10933407	2:233610988	A/G	GIGYF2	intron	0.996	1.05993	0.0130	7.363E-6		5
rs10933408	2:233611636	C/G	GIGYF2	intron	0.994	1.06024	0.0130	6.727E-6		7
rs10933410	2:233661994	A/G	GIGYF2	intron	0.891	1.05496	0.0207	0.009797		7
rs10933411	2:233706847	A/G	GIGYF2	intron	1.000	0.96454	0.0111	0.001187		7
rs10933412	2:233707226	C/G	GIGYF2	intron	1.000	1.03707	0.0111	0.001084		7
rs1104764	2:233561743	C/G	GIGYF2	near-gene-5	0.971	1.06887	0.0109	1.105E-9		4
rs111655224	2:233687024	A/G	GIGYF2	intron	0.619	0.89530	0.0567	0.0511		5
rs111923841	2:233685835	C/G	GIGYF2	intron	0.656	1.04823	0.0648	0.4671		7
rs112081747	2:233706075	A/G	GIGYF2	intron	0.932	1.02685	0.0206	0.1992		7
rs112133824	2:233588474	T/C	GIGYF2	intron	0.991	0.96541	0.0112	0.00169		6
rs112547321	2:233721216	A/G	GIGYF2	intron	1.000	0.96880	0.0213	0.1357		5
rs112743703	2:233695249	T/C	GIGYF2	intron	0.656	0.95418	0.0648	0.4691		7
rs113166238	2:233686035	C/G	GIGYF2	intron	0.986	0.97365	0.0141	0.05946		6
rs113295311	2:233618737	T/C	GIGYF2	intron	0.980	1.06439	0.0132	2.334E-6		7
rs113543770	2:233588735	T/C	GIGYF2	intron	0.996	1.02737	0.0215	0.2097		7
rs113677746	2:233597954	A/G	GIGYF2	intron,near-gene-5	1.000	1.02562	0.0215	0.2384		7
rs113707255	2:233700609	A/G	GIGYF2	intron	0.893	0.94791	0.0207	0.009639		5
rs113844726	2:233706693	T/C	GIGYF2	intron	0.713	0.91723	0.0497	0.0821		6
rs113897697	2:233685798	C/G	GIGYF2	intron	0.986	1.01939	0.0300	0.5212		6
rs114254577	2:233567473	C/G	GIGYF2	intron	0.821	1.00713	0.0354	0.842		6
rs114520841	2:233597163	C/G	GIGYF2	intron,near-gene-5	0.971	1.02214	0.0212	0.3017		6
rs114547586	2:233572387	A/G	GIGYF2	intron	0.968	0.97541	0.0216	0.2504		6
rs114745977	2:233683095	A/G	GIGYF2	intron	0.601	0.89844	0.0578	0.06377		7
rs115065613	2:233569307	A/G	GIGYF2	intron	0.929	1.02696	0.0222	0.2298		7
rs115255027	2:233606203	A/G	GIGYF2	intron	0.971	1.02214	0.0212	0.3018		5
rs115371998	2:233700255	T/C	GIGYF2	intron	0.725	1.01765	0.0611	0.7746		6
rs115387410	2:233562539	A/G	GIGYF2	intron	0.784	0.98886	0.0329	0.7342		2b
rs115845643	2:233584574	A/G	GIGYF2	intron	0.603	1.12693	0.0606	0.04875		6
rs116066641	2:233615658	T/G	GIGYF2	intron	0.850	0.99870	0.0353	0.97		7
rs116146641	2:233705105	A/T	GIGYF2	intron	0.632	0.91347	0.0614	0.1403		7
rs116151766	2:233578156	T/C	GIGYF2	intron	0.689	0.88294	0.0642	0.05248		7
rs116438333	2:233683995	A/G	GIGYF2	intron	0.632	0.90792	0.0610	0.113		7
rs11684636	2:233691895	A/G	GIGYF2	intron	1.010	0.94734	0.0139	0.0001037		7
rs11689661	2:233684833	T/C	GIGYF2	intron	0.995	0.94459	0.0141	0.0000506		6
rs11690474	2:233585319	T/G	GIGYF2	intron	0.928	0.96406	0.0119	0.002158		6
rs11692545	2:233574396	A/G	GIGYF2	intron	0.990	1.03717	0.0112	0.001082		6
rs117303141	2:233576083	T/G	GIGYF2	intron	0.823	0.99312	0.0352	0.844		7
rs11883745	2:233689379	C/G	GIGYF2	intron	1.000	1.02922	0.0214	0.1782		7
rs11883794	2:233599309	C/G	GIGYF2	intron	1.000	0.97151	0.0213	0.1749		7
rs11884898	2:233700389	T/C	GIGYF2	intron	0.991	1.03262	0.0217	0.1381		5
rs11885646	2:233560026	A/G	GIGYF2	near-gene-5	0.953	1.02603	0.0224	0.2515		6
rs11892326	2:233609982	C/G	GIGYF2	intron	1.000	0.98916	0.0181	0.5475		4
rs11892639	2:233691243	C/G	GIGYF2	intron	1.000	0.97093	0.0213	0.1669		6
rs11897789	2:233624257	A/G	GIGYF2	intron	1.000	1.02881	0.0213	0.1832		6
rs11900295	2:233685700	C/G	GIGYF2	intron	1.000	0.96831	0.0213	0.1307		7
rs11900327	2:233685644	A/G	GIGYF2	intron	1.000	1.03252	0.0213	0.1324		7
rs11901015	2:233692642	A/T	GIGYF2	intron	1.000	1.03645	0.0212	0.09183		7
rs11904619	2:233720166	T/C	GIGYF2	intron	0.985	1.06567	0.0132	1.351E-6		5
rs11904714	2:233699219	A/G	GIGYF2	intron	1.000	1.03510	0.0212	0.1033		6
rs12052869	2:233591551	A/G	GIGYF2	intron	0.997	0.94092	0.0130	2.666E-6		6
rs12105766	2:233617647	T/C	GIGYF2	intron	0.998	1.07037	0.0108	3.057E-10		7
rs12328140	2:233711987	A/G	GIGYF2	intron	0.998	0.94176	0.0130	3.566E-6		6
rs12328151	2:233712248	A/G	GIGYF2	coding-synon,ncRNA	0.998	0.94158	0.0130	3.376E-6		7
rs12474040	2:233615345	T/G	GIGYF2	intron	1.000	1.03676	0.0111	0.001179		6
rs12478564	2:233598340	T/C	GIGYF2	intron,near-gene-5	1.000	0.96435	0.0111	0.001129		7
rs12619195	2:233678326	A/G	GIGYF2	intron	0.995	1.07015	0.0108	3.629E-10		7
rs12619228	2:233678473	A/G	GIGYF2	intron	0.987	0.98089	0.0300	0.52		7
rs12623027	2:233702996	A/G	GIGYF2	intron	0.848	0.95132	0.0134	0.0001968		6
rs12623408	2:233569951	A/G	GIGYF2	intron	0.963	1.02480	0.0302	0.4168		7
rs12694915	2:233586502	T/C	GIGYF2	intron	0.993	1.06237	0.0130	3.226E-6		6
rs12694916	2:233608163	A/G	GIGYF2	intron	0.994	1.06024	0.0130	6.785E-6		7
rs12694917	2:233707611	T/C	GIGYF2	intron	1.000	1.03686	0.0111	0.001154		5
rs12986696	2:233563840	T/C	GIGYF2	intron	0.833	0.94620	0.0430	0.1981		2b
rs12987513	2:233622066	A/G	GIGYF2	intron	1.000	1.03686	0.0111	0.001153		6
rs12988087	2:233700977	T/C	GIGYF2	intron	0.937	1.06737	0.0137	1.823E-6		6
rs12990821	2:233617585	C/G	GIGYF2	intron	1.000	1.03697	0.0111	0.001113		6
rs12991088	2:233617520	T/G	GIGYF2	intron	0.999	0.96590	0.0113	0.002079		6
rs12993791	2:233690082	T/C	GIGYF2	intron	0.998	1.07616	0.0111	3.629E-11		5
rs12997185	2:233560587	A/T	GIGYF2	near-gene-5	0.965	1.03345	0.0113	0.003662		7
rs13001052	2:233683984	T/C	GIGYF2	intron	0.998	1.07616	0.0111	3.661E-11		7
rs13003675	2:233584109	T/C	GIGYF2	intron	0.990	0.96483	0.0112	0.001439		6
rs13003738	2:233649160	T/C	GIGYF2	intron	0.828	0.99402	0.0120	0.6163		6
rs13004406	2:233584557	A/T	GIGYF2	intron	0.994	1.03759	0.0112	0.0009494		6
rs13007783	2:233566679	A/G	GIGYF2	intron	0.985	0.96474	0.0112	0.001374		7
rs13008436	2:233719948	T/C	GIGYF2	intron	0.975	1.07433	0.0111	1.252E-10		7
rs13009957	2:233713237	A/G	GIGYF2	intron	0.999	1.07627	0.0111	3.268E-11		6
rs13011298	2:233612996	A/G	GIGYF2	intron	1.000	1.03676	0.0111	0.001179		7
rs13013142	2:233600606	A/G	GIGYF2	intron,ncRNA	1.000	1.03707	0.0111	0.001081		6
rs13021246	2:233623111	T/C	GIGYF2	intron	1.000	1.03697	0.0112	0.001144		7
rs13021823	2:233686862	A/G	GIGYF2	intron	0.989	0.92960	0.0111	4.817E-11		6
rs13024330	2:233715487	A/G	GIGYF2	intron	0.999	1.07627	0.0111	3.412E-11		7
rs13029336	2:233569935	A/G	GIGYF2	intron	0.995	0.97609	0.0108	0.02448		6
rs13035829	2:233604487	A/T	GIGYF2	intron	1.000	1.03707	0.0111	0.001065		5
rs13386650	2:233593229	A/G	GIGYF2	intron	0.997	1.06173	0.0130	3.728E-6		7
rs13393621	2:233655236	A/G	GIGYF2	intron	0.805	1.03521	0.0253	0.1718		6
rs13396169	2:233668445	T/C	GIGYF2	intron	0.649	0.95390	0.0259	0.06794		6
rs13396293	2:233573453	C/G	GIGYF2	intron	0.983	1.06014	0.0130	7.588E-6		7
rs13401578	2:233671539	T/G	GIGYF2	intron	0.944	1.05749	0.0152	0.0002367		7
rs13408229	2:233682042	A/G	GIGYF2	intron	0.995	0.94431	0.0141	0.00004633		7
rs13412034	2:233589672	A/G	GIGYF2	intron	0.995	1.06194	0.0130	3.634E-6		7
rs13412513	2:233593337	T/G	GIGYF2	intron	0.997	0.94148	0.0130	3.371E-6		6
rs13424351	2:233573629	A/G	GIGYF2	intron	0.989	1.03552	0.0112	0.001728		6
rs13424728	2:233608884	A/G	GIGYF2	intron	0.729	1.02521	0.0428	0.5608		7
rs13425525	2:233662427	T/C	GIGYF2	intron	0.997	0.94139	0.0130	3.13E-6		7
rs13425918	2:233714686	A/G	GIGYF2	intron	0.998	1.06131	0.0129	4.361E-6		7
rs13426191	2:233617811	T/G	GIGYF2	intron	0.779	1.04019	0.0263	0.1337		6
rs13429857	2:233597965	T/C	GIGYF2	intron,near-gene-5	0.996	0.94139	0.0130	3.129E-6		6
rs138786232	2:233721378	A/G	GIGYF2	intron	0.649	0.91001	0.0440	0.03196		-
rs138868384	2:233596993	A/G	GIGYF2	intron	0.634	1.10010	0.0613	0.1198		-
rs140039794	2:233561561	T/G	GIGYF2	near-gene-5	0.875	1.02593	0.0559	0.6463		-
rs140109980	2:233678022	T/C	GIGYF2	intron	0.865	0.98265	0.0330	0.5944		-
rs142186899	2:233697024	A/G	GIGYF2	intron	0.736	0.89655	0.0428	0.01071		-
rs142579783	2:233596685	C/G	GIGYF2	intron	0.959	0.97560	0.0454	0.5868		-
rs143198072	2:233601034	A/G	GIGYF2	intron,ncRNA	0.763	1.03231	0.0567	0.5741		-
rs143990891	2:233646935	T/G	GIGYF2	intron	0.653	0.88665	0.0407	0.003099		-
rs144273146	2:233678160	A/G	GIGYF2	intron	0.900	0.97863	0.0550	0.6954		-
rs145019391	2:233570170	C/G	GIGYF2	intron	0.892	0.97873	0.0554	0.6983		-
rs145061931	2:233563393	A/G	GIGYF2	intron	0.831	1.00793	0.0427	0.8537		-
rs145076027	2:233678655	T/C	GIGYF2	intron	0.663	1.07875	0.0652	0.2451		-
rs145504260	2:233717122	T/G	GIGYF2	intron	0.864	0.95964	0.0535	0.4411		-
rs147044542	2:233691923	A/T	GIGYF2	intron	0.796	0.98886	0.0412	0.7855		-
rs148529216	2:233618157	T/C	GIGYF2	intron	0.836	1.00572	0.0367	0.876		-
rs149766127	2:233707001	A/C	GIGYF2	intron	0.838	0.96860	0.0650	0.6237		-
rs150046343	2:233716998	A/G	GIGYF2	intron	0.975	1.02010	0.0212	0.3495		-
rs150435042	2:233600275	A/T	GIGYF2	intron	0.600	0.88065	0.0582	0.02892		-
rs151287640	2:233720780	A/G	GIGYF2	intron	0.890	0.98079	0.0385	0.6139		-
rs1515961	2:233623763	A/C	GIGYF2	intron	0.998	0.97268	0.0107	0.00997		5
rs17164	2:233593499	T/C	GIGYF2	intron	0.996	0.92719	0.0111	9.35E-12		7
rs182273005	2:233700986	A/T	GIGYF2	intron	0.897	1.01857	0.0288	0.5225		-
rs184122120	2:233569600	T/C	GIGYF2	intron	0.953	0.94374	0.0178	0.001152		-
rs189821581	2:233592307	T/G	GIGYF2	intron	0.773	1.03769	0.0485	0.4457		-
rs1947105	2:233721455	A/G	GIGYF2	intron	1.000	1.03614	0.0111	0.001435		1f
rs2044449	2:233718808	A/G	GIGYF2	intron	1.000	1.03655	0.0111	0.001274		3a
rs2044450	2:233718877	T/C	GIGYF2	intron	0.984	1.06545	0.0132	1.511E-6		4
rs2044451	2:233678786	T/C	GIGYF2	intron	0.976	0.97287	0.0143	0.05468		7
rs2100053	2:233719516	T/G	GIGYF2	intron	1.000	1.03686	0.0111	0.001159		6
rs2197563	2:233687080	A/G	GIGYF2	intron	0.996	1.04373	0.0109	0.00008714		7
rs2241979	2:233714592	A/G	GIGYF2	intron	0.988	1.01949	0.0300	0.5193		6
rs2289911	2:233704252	A/G	GIGYF2	intron	0.997	0.92941	0.0111	4.027E-11		7
rs2289912	2:233659553	A/C	GIGYF2	ncRNA,missense	0.987	0.97834	0.0300	0.4661		6
rs2289913	2:233655361	A/G	GIGYF2	intron	1.000	0.97054	0.0213	0.1609		6
rs2289914	2:233642230	A/T	GIGYF2	intron,near-gene-5	0.997	0.94176	0.0130	3.661E-6		5
rs2289915	2:233641924	T/C	GIGYF2	intron,near-gene-5	0.997	0.94167	0.0130	3.508E-6		6
rs2289916	2:233641886	T/C	GIGYF2	intron,near-gene-5	0.790	1.03998	0.0331	0.2364		6
rs2305137	2:233712049	A/G	GIGYF2	intron	1.000	1.03717	0.0111	0.00104		6
rs2305138	2:233660846	A/G	GIGYF2	coding-synon,ncRNA	1.000	1.02665	0.0214	0.219		4
rs2305139	2:233660704	T/G	GIGYF2	intron	0.997	1.06131	0.0130	4.314E-6		5
rs2305141	2:233684402	A/G	GIGYF2	intron	0.995	0.95810	0.0109	0.00008775		7
rs2344611	2:233581937	A/G	GIGYF2	intron	0.992	1.07832	0.0111	1.114E-11		6
rs2344613	2:233603065	C/G	GIGYF2	intron	0.996	1.07842	0.0111	9.58E-12		7
rs2344614	2:233690260	A/G	GIGYF2	intron	1.000	0.96793	0.0213	0.1253		6
rs2344615	2:233690382	T/G	GIGYF2	intron	0.986	1.03262	0.0143	0.02492		7
rs2592104	2:233645970	A/G	GIGYF2	intron	0.981	0.92960	0.0111	4.541E-11		6
rs2592105	2:233645968	C/G	GIGYF2	intron	0.999	1.03541	0.0112	0.001829		6
rs2592113	2:233669553	T/C	GIGYF2	intron	1.000	0.96454	0.0111	0.001182		7
rs2674839	2:233669040	C/G	GIGYF2	intron	1.000	0.96551	0.0112	0.001622		7
rs283465	2:233666787	A/G	GIGYF2	intron	0.957	0.93305	0.0113	8.388E-10		7
rs283466	2:233667744	A/G	GIGYF2	intron	0.963	1.04791	0.0110	0.00002052		7
rs283468	2:233658309	T/C	GIGYF2	intron	0.998	0.96696	0.0113	0.002925		7
rs283469	2:233656997	T/G	GIGYF2	intron	0.999	0.96561	0.0112	0.001687		7
rs283470	2:233656918	A/G	GIGYF2	intron	0.996	0.93800	0.0108	2.622E-9		7
rs283471	2:233656627	A/G	GIGYF2	intron	0.997	0.96686	0.0113	0.002851		7
rs283473	2:233654847	A/G	GIGYF2	intron	0.995	1.02706	0.0107	0.01288		7
rs283474	2:233654627	A/G	GIGYF2	intron	0.998	1.03386	0.0113	0.003165		6
rs283475	2:233654381	T/G	GIGYF2	intron	0.998	0.96705	0.0113	0.002949		7
rs283476	2:233650168	A/G	GIGYF2	intron	0.998	1.03427	0.0113	0.002821		7
rs283477	2:233649427	A/G	GIGYF2	intron	0.994	1.03427	0.0113	0.0029		7
rs283478	2:233649377	A/G	GIGYF2	intron	0.902	0.96329	0.0122	0.002272		7
rs283479	2:233648754	A/G	GIGYF2	intron	0.998	1.03386	0.0113	0.003126		6
rs283480	2:233648742	A/G	GIGYF2	intron	0.998	0.96725	0.0113	0.003211		7
rs283481	2:233648091	A/G	GIGYF2	intron	0.998	1.03386	0.0113	0.003113		5
rs283482	2:233646920	A/T	GIGYF2	intron	0.980	1.02562	0.0109	0.02055		6
rs283483	2:233646728	A/T	GIGYF2	intron	0.630	1.11807	0.0293	0.0001374		2b
rs283484	2:233646505	A/G	GIGYF2	intron	1.000	1.03562	0.0112	0.001688		2b
rs283485	2:233645691	A/G	GIGYF2	intron	0.990	0.96812	0.0114	0.00432		7
rs283486	2:233644223	A/G	GIGYF2	intron	1.000	1.03666	0.0111	0.001233		5
rs283487	2:233644011	A/G	GIGYF2	intron	0.993	1.07799	0.0111	1.519E-11		6
rs28491817	2:233703903	C/G	GIGYF2	intron	0.998	0.94139	0.0130	3.08E-6		6
rs2880899	2:233581340	A/G	GIGYF2	intron	1.000	1.02685	0.0214	0.2155		5
rs34135166	2:233588006	A/T	GIGYF2	intron	0.824	0.95514	0.0263	0.08107		5
rs34388285	2:233662578	T/C	GIGYF2	intron	0.976	0.94914	0.0274	0.05701		6
rs34418122	2:233610991	T/C	GIGYF2	intron	0.826	0.95676	0.0313	0.1581		5
rs34424361	2:233721525	A/G	GIGYF2	coding-synon,ncRNA	0.676	0.92459	0.0424	0.06455		4
rs34526827	2:233649152	A/T	GIGYF2	intron	0.699	1.03645	0.0272	0.1887		6
rs34707169	2:233699459	T/C	GIGYF2	intron	0.998	1.07681	0.0111	2.583E-11		7
rs34832091	2:233620135	T/C	GIGYF2	intron	0.982	0.93904	0.0132	1.853E-6		6
rs34880628	2:233614819	T/C	GIGYF2	intron	0.999	0.96609	0.0113	0.002182		5
rs35085837	2:233624363	A/G	GIGYF2	intron	1.000	1.03645	0.0111	0.001294		6
rs35094759	2:233573539	A/T	GIGYF2	intron	0.806	0.96262	0.0275	0.1657		6
rs35212961	2:233582762	T/C	GIGYF2	intron	0.996	0.96397	0.0112	0.001007		6
rs35285732	2:233588172	A/G	GIGYF2	intron	0.977	0.96686	0.0113	0.002988		7
rs35362030	2:233612845	A/G	GIGYF2	intron	1.000	1.03707	0.0111	0.001082		6
rs35395584	2:233573698	C/G	GIGYF2	intron	0.991	0.96425	0.0112	0.001117		7
rs35491427	2:233688542	T/C	GIGYF2	intron	0.998	1.07638	0.0111	3.247E-11		6
rs35620421	2:233578086	A/C	GIGYF2	intron	0.838	0.94563	0.0428	0.1907		7
rs35621474	2:233574812	A/G	GIGYF2	intron	0.990	0.96397	0.0112	0.001031		7
rs35778045	2:233643081	A/G	GIGYF2	intron,near-gene-5	0.997	0.94158	0.0129	3.273E-6		7
rs35785837	2:233611992	A/G	GIGYF2	intron	0.994	1.06035	0.0130	6.62E-6		7
rs35928329	2:233607900	T/G	GIGYF2	intron	0.994	0.94318	0.0130	6.798E-6		7
rs36007169	2:233621834	A/G	GIGYF2	intron	0.996	1.03666	0.0112	0.001292		7
rs36038193	2:233592955	T/C	GIGYF2	intron	0.978	1.03210	0.0144	0.02756		6
rs3816334	2:233708806	A/G	GIGYF2	coding-synon,ncRNA	1.000	0.96406	0.0111	0.001013		3a
rs3816335	2:233671530	A/G	GIGYF2	intron	0.984	1.02102	0.0300	0.488		7
rs3816336	2:233681265	A/G	GIGYF2	intron	0.993	1.02603	0.0216	0.2348		6
rs3817310	2:233612583	A/C	GIGYF2	intron	1.000	1.02480	0.0214	0.2518		7
rs3817311	2:233612557	T/C	GIGYF2	intron	1.000	0.96425	0.0111	0.001077		7
rs4036954	2:233701221	A/G	GIGYF2	intron	0.820	1.06481	0.0290	0.03039		7
rs4144794	2:233562325	T/C	GIGYF2	intron	0.959	1.02778	0.0223	0.2189		4
rs4144795	2:233562731	C/G	GIGYF2	intron	0.973	1.07821	0.0112	1.824E-11		4
rs4144796	2:233562210	T/C	GIGYF2	intron	0.972	1.02655	0.0109	0.01636		4
rs4144797	2:233562197	T/C	GIGYF2	intron	0.965	1.07713	0.0112	3.634E-11		4
rs4517962	2:233578337	T/C	GIGYF2	intron	0.992	1.03780	0.0112	0.0008834		5
rs4973053	2:233670099	A/G	GIGYF2	intron	1.000	1.03645	0.0111	0.001306		7
rs4973054	2:233710713	C/G	GIGYF2	intron	0.998	1.03738	0.0112	0.001021		5
rs4973055	2:233720283	T/G	GIGYF2	intron	0.988	1.04050	0.0111	0.0003657		7
rs4973056	2:233720765	A/C	GIGYF2	intron	0.992	1.03852	0.0112	0.0007256		6
rs4973559	2:233687304	T/C	GIGYF2	intron	0.967	1.04123	0.0110	0.0002361		7
rs4973560	2:233687322	T/C	GIGYF2	intron	0.991	1.04310	0.0109	0.0001032		7
rs4973561	2:233687337	C/G	GIGYF2	intron	0.992	0.95705	0.0109	0.00005388		6
rs4973563	2:233716421	T/C	GIGYF2	intron	0.991	1.07605	0.0112	4.983E-11		7
rs4973564	2:233718440	A/G	GIGYF2	intron	0.991	0.93379	0.0108	2.385E-10		5
rs5004510	2:233679275	A/C	GIGYF2	intron	0.784	0.92312	0.0135	3.277E-9		6
rs57986228	2:233567934	T/C	GIGYF2	intron	0.969	0.97239	0.0213	0.1879		7
rs58466616	2:233709593	T/C	GIGYF2	intron	1.000	0.97054	0.0213	0.1611		7
rs58520085	2:233578904	A/G	GIGYF2	intron	0.998	1.02942	0.0214	0.1742		7
rs59514271	2:233679854	T/G	GIGYF2	intron	1.000	0.96609	0.0208	0.09743		4
rs60532570	2:233692100	T/G	GIGYF2	intron	1.000	1.02994	0.0213	0.1666		7
rs60726219	2:233706721	A/T	GIGYF2	intron	0.911	0.95734	0.0201	0.0301		6
rs61518838	2:233616699	T/C	GIGYF2	intron	1.000	0.96831	0.0209	0.1224		6
rs62193269	2:233560303	A/T	GIGYF2	near-gene-5	0.965	1.06780	0.0110	2.092E-9		7
rs62193271	2:233570199	T/C	GIGYF2	intron	0.987	1.07735	0.0112	2.44E-11		6
rs62193305	2:233679166	T/C	GIGYF2	intron	0.997	0.94111	0.0130	2.8E-6		6
rs62193307	2:233683244	T/C	GIGYF2	intron	0.931	0.94895	0.0292	0.07288		6
rs62193335	2:233698457	A/C	GIGYF2	intron	0.849	0.92747	0.0142	1.142E-7		7
rs62193341	2:233708393	A/G	GIGYF2	intron	0.885	1.08383	0.0134	1.856E-9		7
rs6437071	2:233568793	A/G	GIGYF2	intron	0.992	0.97541	0.0108	0.02062		7
rs6437074	2:233712296	A/G	GIGYF2	intron	1.000	1.03697	0.0111	0.001119		6
rs66549961	2:233602293	A/G	GIGYF2	intron	1.000	1.03686	0.0111	0.001151		7
rs67013068	2:233608253	C/G	GIGYF2	intron	1.000	0.96397	0.0111	0.0009869		7
rs6710294	2:233579634	T/C	GIGYF2	intron	0.992	1.07047	0.0108	3.335E-10		6
rs6714245	2:233580505	T/C	GIGYF2	intron	0.992	1.03863	0.0112	0.0006885		7
rs6716488	2:233595163	A/C	GIGYF2	intron	0.994	0.92765	0.0111	1.246E-11		6
rs6724117	2:233593660	T/G	GIGYF2	intron	0.990	1.03562	0.0112	0.001868		6
rs6733495	2:233616709	A/G	GIGYF2	intron	0.998	1.07069	0.0108	2.554E-10		6
rs6739638	2:233576015	A/G	GIGYF2	intron	0.992	0.96435	0.0112	0.001161		7
rs6739794	2:233576165	A/G	GIGYF2	intron	0.989	0.93473	0.0108	4.8E-10		7
rs6747479	2:233568875	T/C	GIGYF2	intron	0.980	1.06131	0.0130	4.879E-6		6
rs6747645	2:233571033	A/G	GIGYF2	intron	0.986	1.03572	0.0111	0.001618		5
rs6753206	2:233580823	A/T	GIGYF2	intron	0.968	0.96773	0.0144	0.02238		7
rs71421657	2:233583662	T/C	GIGYF2	intron	0.874	1.03521	0.0206	0.09308		6
rs71421663	2:233619131	A/G	GIGYF2	intron	1.000	1.03717	0.0111	0.001053		6
rs71421665	2:233654647	T/C	GIGYF2	intron	0.815	0.95514	0.0179	0.01037		7
rs72617178	2:233586361	T/C	GIGYF2	intron	0.978	0.97658	0.0301	0.4318		7
rs72617179	2:233592613	T/C	GIGYF2	intron	0.983	0.97697	0.0300	0.438		6
rs72617180	2:233597663	A/G	GIGYF2	intron,near-gene-5	0.984	0.97697	0.0300	0.4382		7
rs72617182	2:233648741	T/C	GIGYF2	intron	0.986	0.97961	0.0300	0.4935		7
rs73005582	2:233678916	T/C	GIGYF2	intron	0.997	0.94148	0.0130	3.259E-6		6
rs73092767	2:233576354	A/G	GIGYF2	intron	0.993	0.96657	0.0210	0.1051		7
rs73092790	2:233593774	A/G	GIGYF2	intron	1.000	1.02542	0.0214	0.2401		7
rs73102257	2:233645075	T/C	GIGYF2	intron	1.000	1.02655	0.0214	0.2211		6
rs73102286	2:233665628	T/C	GIGYF2	intron	1.000	1.02963	0.0213	0.1698		6
rs73106355	2:233717603	T/C	GIGYF2	intron	1.000	0.97210	0.0213	0.1849		5
rs73107693	2:233565446	A/C	GIGYF2	intron	0.969	1.02963	0.0222	0.1887		7
rs74395302	2:233700626	A/C	GIGYF2	intron	0.992	0.97307	0.0217	0.2077		5
rs74827722	2:233661727	T/C	GIGYF2	intron	0.797	1.01238	0.0416	0.7667		7
rs75478542	2:233604889	T/C	GIGYF2	intron	0.863	1.00803	0.0228	0.7243		7
rs75638431	2:233561728	C/G	GIGYF2	near-gene-5	0.949	0.96986	0.0145	0.03479		4
rs7568385	2:233708066	A/G	GIGYF2	intron	0.965	0.96561	0.0113	0.001956		5
rs7577861	2:233689297	T/C	GIGYF2	intron	0.999	1.03987	0.0117	0.0008478		7
rs75911181	2:233599644	T/C	GIGYF2	intron	0.973	0.94582	0.0176	0.001509		7
rs76074281	2:233563572	C/G	GIGYF2	intron	0.972	1.02419	0.0219	0.2753		3a
rs76172560	2:233686383	A/G	GIGYF2	intron	0.700	1.03925	0.0683	0.5728		6
rs76263248	2:233566645	A/G	GIGYF2	intron	0.827	0.98482	0.0223	0.494		7
rs76340079	2:233701109	A/T	GIGYF2	intron	0.752	1.00441	0.0122	0.7181		6
rs76522868	2:233609050	C/G	GIGYF2	intron	0.971	0.97834	0.0212	0.3015		7
rs76556984	2:233612041	T/G	GIGYF2	intron	0.971	1.02224	0.0212	0.3013		6
rs76729858	2:233572169	T/C	GIGYF2	intron	0.954	1.02532	0.0214	0.2428		5
rs76754523	2:233709756	T/C	GIGYF2	intron	0.769	1.01990	0.0344	0.568		7
rs77285153	2:233649889	A/G	GIGYF2	intron	0.922	1.04383	0.0270	0.1118		7
rs77535750	2:233560332	T/C	GIGYF2	near-gene-5	0.952	1.02573	0.0224	0.2577		7
rs778166	2:233664097	A/T	GIGYF2	intron	0.993	1.03717	0.0112	0.00111		6
rs78052011	2:233682827	A/T	GIGYF2	intron	0.994	0.97434	0.0216	0.2294		6
rs78231049	2:233598983	A/C	GIGYF2	intron,near-gene-5	0.666	0.96909	0.0465	0.4998		7
rs78405765	2:233667025	A/G	GIGYF2	intron	0.976	0.97707	0.0148	0.1153		7
rs78933364	2:233684379	A/G	GIGYF2	intron	0.812	0.92146	0.0417	0.0497		6
rs79182291	2:233623995	A/G	GIGYF2	intron	0.831	0.99601	0.0338	0.9058		6
rs79196035	2:233649301	T/C	GIGYF2	intron	0.697	1.10407	0.0275	0.0003156		7
rs79489545	2:233716566	T/C	GIGYF2	intron	0.997	0.99322	0.0218	0.7546		7
rs79801783	2:233716425	T/C	GIGYF2	intron	0.890	1.02183	0.0385	0.5736		6
rs79921412	2:233579546	T/C	GIGYF2	intron	0.788	0.95715	0.0192	0.02256		7
rs79928194	2:233649290	T/C	GIGYF2	intron	0.917	0.99045	0.0173	0.5802		6
rs80020039	2:233560454	A/C	GIGYF2	near-gene-5	0.951	1.02778	0.0222	0.2169		5
rs921054	2:233694673	A/G	GIGYF2	intron	0.993	1.04258	0.0109	0.0001323		6
rs921055	2:233697337	A/C	GIGYF2	intron	0.998	0.92904	0.0111	3.27E-11		7
rs9288675	2:233605585	A/G	GIGYF2	intron	0.998	0.94026	0.0129	1.937E-6		6
rs9653383	2:233670380	A/C	GIGYF2	intron	0.995	0.96368	0.0112	0.000926		6
rs9679089	2:233585327	T/C	GIGYF2	intron	0.962	0.96474	0.0115	0.001858		7
rs9808146	2:233669262	T/C	GIGYF2	intron	0.997	0.94158	0.0130	3.429E-6		6
rs983430	2:233567114	A/G	GIGYF2	intron	0.985	1.03634	0.0112	0.001446		6
rs991873	2:233711046	A/G	GIGYF2	intron	1.000	0.96406	0.0111	0.001009		4
rs9973586	2:233603534	A/G	GIGYF2	intron	0.997	1.06237	0.0130	3.009E-6		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information