GCLM

Basic Information

Gene Symbol	GCLM
Entrez Id	2730
Position	chr1:94352590..94375012
Description	glutamate-cysteine ligase, modifier subunit
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10489605	1:94352381	T/C	GCLM	near-gene-3	0.998	0.97961	0.0200	0.3015		7
rs10874809	1:94354948	T/C	GCLM	intron	0.999	1.01248	0.0111	0.2639		6
rs112207186	1:94363086	T/C	GCLM	intron	0.683	1.09735	0.0636	0.1439		6
rs12040570	1:94355478	A/T	GCLM	intron	0.974	0.99671	0.0110	0.7627		6
rs12057371	1:94367977	A/G	GCLM	intron	0.828	0.99045	0.0129	0.4552		7
rs12068168	1:94367764	T/C	GCLM	intron	0.963	0.99392	0.0123	0.6205		7
rs12068345	1:94368158	T/C	GCLM	intron	0.983	0.99273	0.0125	0.5555		7
rs12089163	1:94364026	A/T	GCLM	intron	0.997	0.99273	0.0121	0.5455		6
rs12090038	1:94356503	A/G	GCLM	intron	1.000	1.00773	0.0423	0.8561		7
rs12090230	1:94356962	A/G	GCLM	intron	1.000	1.00773	0.0423	0.8565		6
rs12094906	1:94367819	T/C	GCLM	intron	0.855	1.00240	0.0126	0.8518		6
rs12094966	1:94352842	T/C	GCLM	near-gene-3,untranslated-3	1.000	1.00783	0.0423	0.8544		7
rs12140446	1:94364559	A/T	GCLM	intron	0.991	0.99671	0.0111	0.7687		6
rs12410324	1:94372626	A/T	GCLM	intron	0.883	0.98010	0.0428	0.6385		5
rs138340857	1:94352583	A/G	GCLM	near-gene-3	0.670	1.11394	0.0622	0.08298		-
rs142624974	1:94356721	A/G	GCLM	intron	0.801	1.02163	0.0411	0.6025		-
rs17376966	1:94369666	T/C	GCLM	intron	0.693	0.97590	0.0542	0.6526		5
rs17878271	1:94361182	A/G	GCLM	intron	0.993	0.97482	0.0209	0.2218		7
rs17878294	1:94365901	A/G	GCLM	intron	0.993	1.02542	0.0209	0.2297		6
rs17880076	1:94353795	T/G	GCLM	untranslated-3	0.775	1.03780	0.0603	0.5391		6
rs17880917	1:94364930	A/G	GCLM	intron	0.765	1.00210	0.0477	0.9653		6
rs17881810	1:94360756	C/G	GCLM	intron	0.993	0.97638	0.0209	0.2516		7
rs17881908	1:94353668	T/C	GCLM	untranslated-3	0.793	0.99183	0.0364	0.822		7
rs17882506	1:94355476	A/T	GCLM	intron	0.935	0.99900	0.0413	0.9805		6
rs17884788	1:94364965	T/C	GCLM	intron	0.992	1.02501	0.0209	0.238		6
rs17885006	1:94360958	A/T	GCLM	intron	0.668	1.03396	0.0293	0.254		6
rs17885151	1:94363112	T/C	GCLM	intron	0.993	0.97638	0.0209	0.2521		7
rs17885307	1:94353876	A/G	GCLM	untranslated-3	0.775	0.96599	0.0604	0.5671		7
rs17886352	1:94367481	C/G	GCLM	intron	0.989	0.97502	0.0209	0.227		7
rs17886844	1:94370458	A/G	GCLM	intron	0.971	1.00200	0.0388	0.9595		7
rs17886976	1:94355550	C/G	GCLM	intron	0.880	1.00562	0.0329	0.8643		7
rs189965761	1:94353053	C/G	GCLM	untranslated-3	0.631	1.08981	0.0507	0.08942		-
rs2064764	1:94358343	T/C	GCLM	intron	0.998	0.98699	0.0111	0.239		6
rs2234729	1:94370216	A/G	GCLM	intron	0.981	0.99850	0.0433	0.9721		6
rs2234730	1:94360316	A/G	GCLM	intron	0.799	1.00713	0.0404	0.8604		6
rs2273406	1:94374576	A/G	GCLM	intron	0.991	1.00864	0.0143	0.5482		2a
rs2301022	1:94372878	T/C	GCLM	intron	0.998	1.01826	0.0113	0.1089		4
rs2391323	1:94357404	C/G	GCLM	intron	0.997	0.98580	0.0112	0.1996		7
rs3789453	1:94374026	T/C	GCLM	intron	1.010	0.98344	0.0114	0.1427		4
rs3827715	1:94369623	T/C	GCLM	intron	0.992	1.00582	0.0121	0.6336		5
rs4598495	1:94356796	C/G	GCLM	intron	0.997	1.00743	0.0121	0.5387		7
rs61782165	1:94356377	T/G	GCLM	intron	0.993	1.02542	0.0209	0.2288		5
rs6541405	1:94371138	A/G	GCLM	intron	0.999	0.98965	0.0138	0.4517		4
rs6667121	1:94361152	C/G	GCLM	intron	0.997	1.01319	0.0110	0.2336		7
rs6692306	1:94357142	A/G	GCLM	intron	1.000	1.00854	0.0422	0.8399		7
rs6700112	1:94355412	A/G	GCLM	intron	0.991	1.00793	0.0124	0.5214		6
rs6702045	1:94357325	C/G	GCLM	intron	1.000	0.99243	0.0423	0.8573		7
rs71652546	1:94352558	T/C	GCLM	near-gene-3	0.601	1.05327	0.0528	0.3257		6
rs72969374	1:94356929	C/G	GCLM	intron	1.000	0.99243	0.0423	0.8567		7
rs7513671	1:94353573	T/C	GCLM	untranslated-3	0.999	0.98748	0.0111	0.2588		7
rs7515813	1:94367783	A/G	GCLM	intron	0.929	0.98354	0.0119	0.1604		6
rs769211	1:94360107	A/C	GCLM	intron	0.997	0.99173	0.0121	0.4926		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information