GATAD2A

Basic Information

Gene Symbol	GATAD2A
Entrez Id	54815
Position	chr19:19496642..19619741
Description	GATA zinc finger domain containing 2A
Gene type	protein-coding

SNP Information

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SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10282	19:19619317	T/C	GATAD2A	untranslated-3	1.000	0.94195	0.0110	5.089E-8		4
rs10401193	19:19591066	A/G	GATAD2A	intron	1.000	0.95858	0.0134	0.001599		6
rs10402451	19:19608537	A/G	GATAD2A	intron	1.000	0.94120	0.0110	3.308E-8		5
rs10404728	19:19595014	T/C	GATAD2A	intron	1.000	1.04352	0.0134	0.00145		6
rs10405625	19:19579046	T/G	GATAD2A	intron	1.000	0.94064	0.0110	2.484E-8		5
rs10406278	19:19494725	A/C	GATAD2A	near-gene-5	0.996	1.05148	0.0146	0.0006039		7
rs10408401	19:19552624	T/C	GATAD2A	intron	0.869	0.94290	0.0121	1.084E-6		7
rs10408596	19:19512657	A/T	GATAD2A	intron	1.000	0.97619	0.0160	0.132		5
rs10408875	19:19503573	T/C	GATAD2A	intron	0.974	0.97814	0.0160	0.1693		6
rs10410664	19:19556651	A/G	GATAD2A	intron	1.000	1.06301	0.0110	2.624E-8		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Showing 1 to 10 of 148 entries

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Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
22196331	GWAS	177 cases; 436 controls
Reference	Study type	Sample size

eQTL Information