GABRP

Basic Information

Gene Symbol	GABRP
Entrez Id	2568
Position	chr5:170210723..170241051
Description	gamma-aminobutyric acid (GABA) A receptor, pi
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10039477	5:170229354	T/G	GABRP	intron	0.985	1.01877	0.0148	0.2087		7
rs10043047	5:170231936	A/G	GABRP	intron	0.976	0.98196	0.0147	0.2143		6
rs10054743	5:170230688	A/G	GABRP	intron	1.010	0.99084	0.0122	0.4489		6
rs10061513	5:170234234	A/G	GABRP	intron	0.994	0.99074	0.0124	0.4514		7
rs10063254	5:170234721	T/C	GABRP	intron	0.994	0.99173	0.0123	0.5013		7
rs10065810	5:170227251	T/G	GABRP	intron	0.990	1.00783	0.0123	0.525		7
rs10066092	5:170223642	A/C	GABRP	intron	0.999	0.99710	0.0108	0.7897		6
rs10074306	5:170233424	A/G	GABRP	intron	0.995	1.00753	0.0123	0.5445		7
rs10076413	5:170234420	A/G	GABRP	intron	0.996	1.00713	0.0123	0.5621		6
rs115055063	5:170222539	A/C	GABRP	intron	0.747	0.94904	0.0508	0.3032		7
rs115791988	5:170216735	A/T	GABRP	intron	0.980	0.98098	0.0392	0.6238		7
rs11958810	5:170215778	T/C	GABRP	intron	0.997	1.00723	0.0194	0.7108		4
rs12514407	5:170224915	T/C	GABRP	intron	0.989	0.99104	0.0124	0.4643		5
rs12515575	5:170238724	A/G	GABRP	intron	0.992	0.99730	0.0142	0.8484		6
rs13159160	5:170237384	T/C	GABRP	intron	0.987	0.97054	0.0394	0.4473		5
rs13171610	5:170227070	A/G	GABRP	intron	0.988	0.97629	0.0387	0.5355		7
rs13181738	5:170219723	T/C	GABRP	intron	0.975	1.02388	0.0394	0.5484		7
rs13189911	5:170218238	C/G	GABRP	intron	0.979	0.98069	0.0392	0.6193		5
rs13355115	5:170230812	T/C	GABRP	intron	0.992	0.99213	0.0123	0.5208		7
rs141827030	5:170233550	A/G	GABRP	intron	0.803	0.98069	0.0536	0.7158		-
rs142638742	5:170231304	A/G	GABRP	intron	0.810	1.07735	0.0549	0.1753		-
rs143037510	5:170216766	T/C	GABRP	intron	0.687	0.94431	0.0479	0.2311		-
rs144970637	5:170218108	A/G	GABRP	intron	0.785	0.99263	0.0491	0.88		-
rs146262486	5:170233569	T/C	GABRP	intron	0.843	0.92849	0.0487	0.1277		-
rs150927487	5:170226565	T/C	GABRP	intron	0.702	1.00100	0.0369	0.9784		-
rs17650871	5:170222923	T/C	GABRP	intron	0.804	0.97853	0.0179	0.2257		6
rs184157637	5:170230166	T/C	GABRP	intron	0.741	0.90937	0.0706	0.1787		-
rs188008457	5:170219212	T/C	GABRP	intron	0.708	1.00461	0.0497	0.9257		-
rs188542920	5:170223067	A/G	GABRP	intron	0.748	1.05190	0.0508	0.3193		-
rs2216589	5:170238089	A/G	GABRP	intron	0.985	1.01450	0.0107	0.1781		7
rs2303135	5:170232614	T/C	GABRP	intron	0.997	0.99750	0.0107	0.8179		7
rs2879354	5:170221067	C/G	GABRP	intron	0.985	0.99521	0.0109	0.6565		7
rs34943873	5:170227217	A/T	GABRP	intron	0.983	1.01066	0.0379	0.781		7
rs35689893	5:170235371	A/G	GABRP	intron	0.990	1.03169	0.0393	0.4271		7
rs35703315	5:170227352	A/G	GABRP	intron	0.988	0.97629	0.0387	0.536		7
rs36049912	5:170241227	A/C	GABRP	near-gene-3	0.988	0.97181	0.0395	0.4694		5
rs3792809	5:170237372	T/C	GABRP	intron	0.994	0.99233	0.0123	0.5304		5
rs3805454	5:170241168	A/G	GABRP	near-gene-3	0.997	0.99412	0.0123	0.6342		5
rs3805455	5:170240494	T/C	GABRP	untranslated-3	0.995	0.99372	0.0107	0.5592		5
rs3805456	5:170240174	T/C	GABRP	untranslated-3	0.997	1.00662	0.0123	0.5918		7
rs3805458	5:170238904	T/C	GABRP	intron	0.997	0.99332	0.0123	0.5857		5
rs3805460	5:170218489	C/G	GABRP	intron	0.966	1.00210	0.0114	0.8553		4
rs3815762	5:170215820	A/T	GABRP	intron	0.997	1.00723	0.0194	0.7107		3a
rs3828621	5:170219678	A/G	GABRP	intron	0.944	1.01106	0.0199	0.5822		7
rs41275331	5:170216508	T/C	GABRP	intron	0.850	0.98787	0.0346	0.7236		7
rs4867630	5:170219349	A/G	GABRP	intron	0.962	0.98906	0.0108	0.3091		7
rs4868029	5:170217502	T/C	GABRP	intron	0.989	1.01066	0.0110	0.3365		7
rs4868030	5:170224916	A/G	GABRP	intron	0.984	1.01898	0.0148	0.2033		5
rs4868031	5:170227334	T/C	GABRP	intron	0.998	0.99760	0.0107	0.8244		6
rs4868032	5:170227470	T/C	GABRP	intron	0.995	0.99860	0.0107	0.8994		6
rs4868033	5:170234264	A/T	GABRP	intron	0.977	0.98857	0.0127	0.3678		6
rs62392792	5:170220333	C/G	GABRP	intron	0.699	0.97045	0.0413	0.4677		6
rs6555918	5:170217020	A/G	GABRP	intron	0.995	1.01096	0.0193	0.572		7
rs6555919	5:170229336	A/G	GABRP	intron	0.988	1.02378	0.0387	0.5437		7
rs6555920	5:170232112	A/G	GABRP	intron	0.997	1.00220	0.0107	0.8359		7
rs6555921	5:170237090	T/C	GABRP	intron	0.987	0.99750	0.0107	0.8156		5
rs6867683	5:170225314	A/G	GABRP	intron	0.932	0.98936	0.0112	0.3394		7
rs6867907	5:170225179	A/G	GABRP	intron	0.985	0.98857	0.0121	0.3419		6
rs6876169	5:170231527	T/C	GABRP	intron	0.997	1.00240	0.0107	0.8244		7
rs6884917	5:170221185	A/G	GABRP	intron	0.993	0.99661	0.0107	0.7495		7
rs6888765	5:170225100	T/C	GABRP	intron	0.996	0.99820	0.0107	0.8666		4
rs6888969	5:170225240	A/T	GABRP	intron	0.997	1.00190	0.0107	0.8558		7
rs72837689	5:170235849	C/G	GABRP	intron	0.791	1.02163	0.0183	0.2405		5
rs73327131	5:170218280	A/G	GABRP	intron	0.991	0.98995	0.0193	0.5997		5
rs74624090	5:170225050	A/T	GABRP	intron	0.989	0.99164	0.0124	0.4975		2b
rs74687155	5:170226474	A/G	GABRP	intron	0.982	1.01217	0.0125	0.332		7
rs75211368	5:170233354	T/C	GABRP	intron	0.992	1.03221	0.0392	0.4187		7
rs79093370	5:170229744	T/G	GABRP	intron	0.993	1.03097	0.0392	0.4357		5
rs9313525	5:170223210	A/G	GABRP	intron	1.000	1.00140	0.0107	0.893		7
rs9968692	5:170234109	T/C	GABRP	intron	0.990	0.98639	0.0140	0.3289		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information