FGF1

Basic Information

Gene Symbol	FGF1
Entrez Id	2246
Position	chr5:141971743..142077635
Description	fibroblast growth factor 1 (acidic)
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10050601	5:142070911	T/C	FGF1	intron	0.882	1.05675	0.0346	0.1104		6
rs10060249	5:142071588	A/G	FGF1	intron	0.968	0.97736	0.0121	0.05873		6
rs10073449	5:142074634	T/G	FGF1	intron	0.713	0.99422	0.0320	0.8567		7
rs10428532	5:142061736	T/C	FGF1	intron	0.983	0.97912	0.0120	0.07886		7
rs10477190	5:142074197	T/C	FGF1	intron	0.681	0.98275	0.0175	0.3195		5
rs10515515	5:142072618	T/C	FGF1	intron	0.942	1.01532	0.0239	0.5242		7
rs111423561	5:142069412	A/C	FGF1	intron	0.618	1.04791	0.0424	0.2701		7
rs111813133	5:142070851	T/G	FGF1	intron	0.959	0.98295	0.0137	0.211		7
rs112356143	5:142058772	A/G	FGF1	intron	0.999	0.98985	0.0227	0.6537		7
rs112504226	5:142069488	A/G	FGF1	intron	0.896	1.05159	0.0345	0.1453		7
rs113742347	5:142069772	C/G	FGF1	intron	0.946	1.01319	0.0229	0.566		6
rs11949141	5:142054255	A/G	FGF1	intron	0.970	1.01258	0.0138	0.365		4
rs11949820	5:142072805	T/C	FGF1	intron	0.906	1.01542	0.0240	0.5222		6
rs11950751	5:142073843	T/C	FGF1	intron	0.825	0.98108	0.0276	0.4893		5
rs11954028	5:142052284	T/C	FGF1	intron	0.995	1.01390	0.0230	0.5486		7
rs11955552	5:142066991	A/G	FGF1	intron,near-gene-5	1.010	1.01704	0.0228	0.4569		7
rs11960262	5:142064507	T/C	FGF1	intron	0.989	1.02143	0.0120	0.07665		5
rs17208887	5:142057163	T/C	FGF1	intron	0.998	0.98896	0.0228	0.6273		4
rs17208894	5:142058480	A/T	FGF1	intron	0.999	0.98965	0.0228	0.6488		7
rs17208908	5:142059978	A/G	FGF1	intron	0.985	1.01359	0.0124	0.277		5
rs17208915	5:142067577	T/C	FGF1	intron,near-gene-5	0.983	1.01491	0.0137	0.2821		4
rs17208929	5:142069953	A/T	FGF1	intron	0.982	0.98501	0.0137	0.2723		7
rs17216776	5:142064526	A/G	FGF1	intron	0.989	1.02143	0.0120	0.07707		5
rs17216804	5:142063705	T/C	FGF1	intron	0.637	0.99970	0.0319	0.9917		7
rs17223100	5:142067460	T/C	FGF1	intron,near-gene-5	0.989	1.01704	0.0125	0.1743		5
rs17223156	5:142064594	T/C	FGF1	intron	0.990	1.01654	0.0125	0.189		5
rs17223163	5:142064224	A/G	FGF1	intron	0.651	1.01694	0.0335	0.6158		4
rs17287413	5:142056554	A/C	FGF1	intron	0.981	1.01593	0.0125	0.2054		7
rs186646831	5:142069544	A/G	FGF1	intron	0.701	1.00702	0.0537	0.8968		-
rs28573977	5:142051860	T/C	FGF1	intron	0.982	1.02112	0.0120	0.08131		7
rs28609749	5:142071154	A/G	FGF1	intron	0.975	1.01562	0.0138	0.2601		6
rs28625535	5:142051875	T/G	FGF1	intron	0.984	1.02112	0.0120	0.08018		7
rs4285263	5:142076023	A/G	FGF1	intron	0.777	1.02245	0.0209	0.2895		7
rs4912646	5:142065324	T/C	FGF1	intron,near-gene-5	0.926	1.05085	0.0337	0.1416		5
rs4912875	5:142056398	A/G	FGF1	intron	0.981	0.97873	0.0129	0.09683		7
rs4912876	5:142073939	A/G	FGF1	intron	0.831	1.01847	0.0122	0.1337		6
rs58797296	5:142066863	A/G	FGF1	intron,near-gene-5	0.984	0.98541	0.0137	0.2827		5
rs58823190	5:142070493	T/C	FGF1	intron	0.981	1.01501	0.0137	0.2782		4
rs6580254	5:142058017	C/G	FGF1	intron	0.980	0.98020	0.0120	0.09478		7
rs6580256	5:142076661	T/C	FGF1	intron	0.861	1.01745	0.0172	0.313		6
rs6876887	5:142075673	A/C	FGF1	intron	0.745	0.97570	0.0206	0.2322		7
rs72796616	5:142055638	A/C	FGF1	intron	0.975	1.01572	0.0138	0.2563		7
rs72796621	5:142056663	A/G	FGF1	intron	0.979	1.01471	0.0137	0.2866		7
rs72796624	5:142061515	A/G	FGF1	intron	0.984	1.01440	0.0137	0.2982		5
rs72796625	5:142062006	A/G	FGF1	intron	0.989	1.01521	0.0125	0.2251		7
rs73795179	5:142069125	C/G	FGF1	intron	0.983	1.01521	0.0137	0.2723		6
rs75590294	5:142057337	T/C	FGF1	intron	0.629	1.02102	0.0305	0.4959		7
rs75838151	5:142069906	A/G	FGF1	intron	0.948	1.02153	0.0143	0.1372		6
rs77332201	5:142071495	T/C	FGF1	intron	0.777	0.95476	0.0418	0.2675		7
rs78034430	5:142057160	T/G	FGF1	intron	0.658	0.98275	0.0295	0.5562		4
rs79046337	5:142053475	T/C	FGF1	intron	0.996	1.01369	0.0230	0.5542		6
rs80209529	5:142056334	A/G	FGF1	intron	0.997	1.01298	0.0229	0.5737		7
rs9324891	5:142052521	T/G	FGF1	intron	0.977	1.01511	0.0137	0.2722		5
rs9324892	5:142059400	T/C	FGF1	intron	0.984	0.98226	0.0119	0.1346		6
rs9324893	5:142061568	T/C	FGF1	intron	0.986	0.97981	0.0120	0.08763		5
rs9324894	5:142066234	A/G	FGF1	intron,near-gene-5	0.923	1.05327	0.0337	0.1234		5
rs9885434	5:142052163	A/G	FGF1	intron	0.979	0.97863	0.0120	0.07062		7
rs9885470	5:142052130	T/C	FGF1	intron	0.978	0.97932	0.0120	0.08049		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information