FAM189B

Basic Information

Gene Symbol	FAM189B
Entrez Id	10712
Position	chr1:155216996..155225274
Description	family with sequence similarity 189, member B
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs116352080	1:155217437	T/G	FAM189B	untranslated-3	0.934	1.02521	0.0129	0.05435		6
rs12406363	1:155215262	T/C	FAM189B	near-gene-5	0.811	0.93221	0.0285	0.01374		5
rs12730000	1:155222472	A/T	FAM189B	intron	0.930	0.97434	0.0125	0.03734		6
rs12748155	1:155222177	T/C	FAM189B	intron	0.982	1.02963	0.0123	0.01741		6
rs147869881	1:155219452	T/C	FAM189B	intron	0.725	0.92849	0.0612	0.225		-
rs1546818	1:155219207	A/T	FAM189B	intron	0.987	0.97025	0.0123	0.01385		6
rs183156909	1:155222493	A/G	FAM189B	intron	0.626	1.02716	0.0606	0.658		-
rs2072647	1:155221837	A/C	FAM189B	intron	0.984	1.02963	0.0123	0.01732		5
rs2075568	1:155218168	T/C	FAM189B	intron	0.987	0.97045	0.0123	0.01426		4
rs2361536	1:155219625	A/C	FAM189B	intron	0.986	1.03045	0.0123	0.01431		5
rs41264931	1:155218301	C/G	FAM189B	intron	0.739	0.97492	0.0429	0.5537		5
rs59352002	1:155222730	A/G	FAM189B	intron	0.965	1.02788	0.0125	0.02789		7
rs61092432	1:155222729	T/C	FAM189B	intron	0.967	0.97064	0.0124	0.01648		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information