Gene Symbol | ERCC4 |
---|---|
Entrez Id | 2072 |
Position | chr16:14014014..14046205 |
Description | excision repair cross-complementation group 4 |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs11075223 | 16:14044717 | A/C | ERCC4 | ncRNA,untranslated-3 | 0.996 | 1.01735 | 0.0112 | 0.1252 | ![]() | 7 |
rs112259692 | 16:14046117 | C/G | ERCC4 | ncRNA,untranslated-3 | 0.979 | 1.01613 | 0.0238 | 0.5009 | ![]() | 7 |
rs113403633 | 16:14046005 | T/C | ERCC4 | ncRNA,untranslated-3 | 0.959 | 1.01390 | 0.0236 | 0.5595 | ![]() | 6 |
rs11644666 | 16:14046472 | A/G | ERCC4 | near-gene-3 | 0.993 | 0.98570 | 0.0118 | 0.2194 | ![]() | 7 |
rs117293226 | 16:14043151 | T/C | ERCC4 | ncRNA,untranslated-3 | 0.760 | 0.93286 | 0.0659 | 0.291 | ![]() | 5 |
rs16963255 | 16:14042108 | A/G | ERCC4 | coding-synon,ncRNA | 0.835 | 1.09374 | 0.0465 | 0.0542 | ![]() | 5 |
rs1799797 | 16:14013993 | A/T | ERCC4 | near-gene-5 | 0.985 | 1.01035 | 0.0119 | 0.3832 | ![]() | 4 |
rs1799798 | 16:14014278 | A/G | ERCC4 | intron | 0.792 | 0.96889 | 0.0201 | 0.1152 | ![]() | 4 |
rs1799799 | 16:14038545 | T/C | ERCC4 | intron | 0.998 | 0.98275 | 0.0112 | 0.1193 | ![]() | 6 |
rs1799800 | 16:14038552 | A/G | ERCC4 | intron | 0.994 | 1.01136 | 0.0118 | 0.3414 | ![]() | 7 |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!