Gene Symbol | EMX1 |
---|---|
Entrez Id | 2016 |
Position | chr2:73144603..73162020 |
Description | empty spiracles homeobox 1 |
Gene type | protein-coding |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs10183113 | 2:73154613 | A/G | EMX1 | intron | 0.980 | 0.99432 | 0.0133 | 0.667 | ![]() | 5 |
rs10196456 | 2:73158476 | A/G | EMX1 | intron | 0.979 | 0.99501 | 0.0133 | 0.7035 | ![]() | 5 |
rs10196568 | 2:73158612 | A/G | EMX1 | intron | 0.977 | 0.99332 | 0.0133 | 0.6145 | ![]() | 5 |
rs138008557 | 2:73144500 | C/G | EMX1 | near-gene-5 | 0.650 | 0.93651 | 0.0515 | 0.2033 | ![]() | - |
rs142151608 | 2:73149963 | T/C | EMX1 | intron | 0.729 | 1.07390 | 0.0594 | 0.2298 | ![]() | - |
rs149913304 | 2:73154108 | C/G | EMX1 | intron | 0.847 | 0.97893 | 0.0414 | 0.6063 | ![]() | - |
rs150883925 | 2:73148804 | T/C | EMX1 | intron | 0.635 | 0.93885 | 0.0699 | 0.3667 | ![]() | - |
rs2077586 | 2:73161551 | A/G | EMX1 | untranslated-3 | 0.915 | 1.06727 | 0.0124 | 1.534E-7 | ![]() | 5 |
rs6748324 | 2:73155664 | C/G | EMX1 | intron | 0.975 | 1.00662 | 0.0134 | 0.6233 | ![]() | 5 |
rs71416768 | 2:73144411 | C/G | EMX1 | near-gene-5 | 0.946 | 0.94667 | 0.0153 | 0.0003429 | ![]() | 4 |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!