EGR1

Basic Information

Gene Symbol	EGR1
Entrez Id	1958
Position	chr5:137801181..137805004
Description	early growth response 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs116326070	5:137805399	A/T	EGR1	near-gene-3	0.994	1.00763	0.0419	0.8562		4
rs141494567	5:137802002	A/G	EGR1	intron	0.870	1.15258	0.0572	0.01302		-
rs150849222	5:137802204	T/C	EGR1	intron	0.641	0.96532	0.0514	0.4925		-
rs1800778	5:137801013	T/C	EGR1	near-gene-5	0.686	0.93782	0.0371	0.08328		4
rs181637383	5:137800894	A/G	EGR1	near-gene-5	0.641	1.11862	0.0492	0.02275		-
rs28365161	5:137801409	T/C	EGR1	untranslated-5	0.991	0.99213	0.0418	0.8506		2b
rs34620091	5:137800116	T/C	EGR1	near-gene-5	0.928	1.00270	0.0427	0.9493		4
rs34838824	5:137800254	A/G	EGR1	near-gene-5	0.642	0.95945	0.0517	0.4234		4
rs34885420	5:137805305	T/C	EGR1	near-gene-3	0.799	1.07756	0.0338	0.02715		4
rs3813321	5:137800024	T/C	EGR1	near-gene-5	0.988	1.03231	0.0107	0.003007		4
rs6914	5:137804635	T/C	EGR1	untranslated-3	0.891	1.03438	0.0263	0.199		4
rs76606969	5:137799388	A/C	EGR1	near-gene-5	0.993	0.99015	0.0420	0.8137		2b
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information