EFTUD1P1

Basic Information

Gene Symbol	EFTUD1P1
Entrez Id	648809
Position	chr15:84748939..84795353
Description	elongation factor Tu GTP binding domain containing 1 pseudogene 1
Gene type	pseudo

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs111280059	15:84779026	A/T	EFTUD1P1	intron	0.864	0.92737	0.0374	0.04406		6
rs111645810	15:84771249	T/G	EFTUD1P1	intron	0.984	1.03066	0.0163	0.06367		7
rs112282737	15:84759622	A/G	EFTUD1P1	intron	0.979	1.04185	0.0152	0.007162		6
rs112532490	15:84753814	T/C	EFTUD1P1	intron	0.904	1.03376	0.0252	0.1877		7
rs112695136	15:84760913	T/C	EFTUD1P1	intron	0.979	1.04185	0.0152	0.007147		7
rs112799474	15:84757452	A/G	EFTUD1P1	intron	0.941	1.00773	0.0138	0.5776		7
rs114873493	15:84758094	T/C	EFTUD1P1	intron	0.922	0.96348	0.0250	0.137		7
rs116842409	15:84754307	A/G	EFTUD1P1	intron	0.867	1.01056	0.0493	0.8306		7
rs116843644	15:84789596	T/G	EFTUD1P1	intron	0.978	1.00230	0.0197	0.9058		7
rs116979211	15:84778100	T/G	EFTUD1P1	intron	0.971	1.00100	0.0197	0.961		7
rs117135238	15:84757573	T/C	EFTUD1P1	intron	0.979	0.98511	0.0180	0.4033		7
rs117360276	15:84788808	C/G	EFTUD1P1	intron	0.919	1.00170	0.0189	0.9271		7
rs117378634	15:84757383	A/C	EFTUD1P1	intron	0.824	1.06386	0.0283	0.02848		7
rs117532339	15:84773777	A/G	EFTUD1P1	intron	0.933	0.99850	0.0424	0.972		5
rs117541138	15:84755375	T/C	EFTUD1P1	intron	0.910	0.95705	0.0462	0.3414		7
rs12050551	15:84763285	A/G	EFTUD1P1	intron	0.992	1.02041	0.0155	0.1912		5
rs12437525	15:84753177	A/G	EFTUD1P1	intron	0.988	1.04781	0.0159	0.003413		7
rs12898924	15:84761475	T/G	EFTUD1P1	intron	0.967	1.08026	0.0124	4.347E-10		6
rs12902070	15:84793558	T/C	EFTUD1P1	intron	0.995	1.08015	0.0122	2.591E-10		7
rs12902936	15:84776046	T/C	EFTUD1P1	intron	0.954	1.00763	0.0154	0.6226		7
rs12904682	15:84791517	C/G	EFTUD1P1	intron	0.719	0.92487	0.0295	0.00819		7
rs12910413	15:84792634	A/G	EFTUD1P1	intron	0.993	0.97064	0.0106	0.004999		6
rs12911210	15:84792083	A/C	EFTUD1P1	intron	0.996	1.08047	0.0122	2.252E-10		1f
rs12915234	15:84758301	A/G	EFTUD1P1	intron	0.993	0.92839	0.0121	9.4E-10		6
rs12915390	15:84792069	T/C	EFTUD1P1	intron	0.996	1.08037	0.0122	2.343E-10		5
rs12916348	15:84765527	T/C	EFTUD1P1	intron	0.993	0.92830	0.0121	9.022E-10		6
rs137884228	15:84774626	A/G	EFTUD1P1	intron	0.823	0.96098	0.0444	0.3702		-
rs140124206	15:84794294	T/G	EFTUD1P1	intron	0.859	0.98995	0.0438	0.8176		-
rs143659568	15:84760536	T/C	EFTUD1P1	intron	0.990	1.02010	0.0154	0.1981		-
rs144105383	15:84753624	A/G	EFTUD1P1	intron	0.980	1.00562	0.0193	0.7713		-
rs144234688	15:84787677	A/T	EFTUD1P1	intron	0.887	0.94847	0.0382	0.1662		-
rs144366739	15:84791092	C/G	EFTUD1P1	intron	0.908	1.03272	0.0416	0.4384		-
rs145891774	15:84788496	A/G	EFTUD1P1	intron	0.972	0.99223	0.0196	0.6918		-
rs145912033	15:84792616	A/G	EFTUD1P1	intron	0.808	1.06269	0.0493	0.2175		-
rs146347582	15:84772980	A/G	EFTUD1P1	intron	0.818	1.07681	0.0576	0.1987		-
rs147077764	15:84783737	A/G	EFTUD1P1	intron	0.836	1.08372	0.0300	0.0073		-
rs148300038	15:84789681	T/C	EFTUD1P1	intron	0.858	0.95313	0.0287	0.09505		-
rs148732635	15:84779832	A/G	EFTUD1P1	intron	0.739	1.07627	0.0666	0.2695		-
rs148924891	15:84791960	A/G	EFTUD1P1	intron	0.965	1.01440	0.0336	0.6699		-
rs150409977	15:84766371	T/G	EFTUD1P1	intron	0.871	0.94356	0.0501	0.2459		-
rs150972510	15:84762689	T/C	EFTUD1P1	intron	0.762	0.92580	0.0644	0.2311		-
rs1567085	15:84758698	A/G	EFTUD1P1	intron	0.888	0.98383	0.0198	0.4088		7
rs1567086	15:84758840	A/G	EFTUD1P1	intron	1.000	1.00864	0.0113	0.4488		7
rs17300048	15:84749477	T/C	EFTUD1P1	intron	0.993	0.92561	0.0122	2.643E-10		4
rs17300292	15:84762568	C/G	EFTUD1P1	intron	0.986	0.92765	0.0122	6.647E-10		7
rs17300336	15:84763062	T/C	EFTUD1P1	intron	0.904	0.97122	0.0256	0.2545		5
rs17300406	15:84764774	T/G	EFTUD1P1	intron	0.991	0.95542	0.0160	0.004333		7
rs17372824	15:84788692	A/G	EFTUD1P1	intron	0.988	1.02112	0.0155	0.1773		7
rs17841161	15:84748914	C/G	EFTUD1P1	near-gene-5	0.881	0.96841	0.0334	0.337		2b
rs190263382	15:84770665	C/G	EFTUD1P1	intron	0.742	0.98620	0.0513	0.7861		-
rs1964060	15:84793161	A/G	EFTUD1P1	intron	0.995	0.97103	0.0106	0.005655		6
rs2135550	15:84749199	A/G	EFTUD1P1	intron	0.987	1.04592	0.0160	0.004853		4
rs2292190	15:84790654	A/G	EFTUD1P1	intron	0.980	0.97687	0.0155	0.1304		6
rs2659154	15:84790476	T/C	EFTUD1P1	intron	0.989	0.95734	0.0160	0.006524		7
rs28415985	15:84788079	A/G	EFTUD1P1	intron	0.990	1.04697	0.0160	0.00413		7
rs28472746	15:84761452	C/G	EFTUD1P1	intron	0.988	1.02122	0.0155	0.1768		7
rs28474939	15:84770946	A/G	EFTUD1P1	intron	0.990	0.95628	0.0159	0.005105		6
rs28635520	15:84789309	T/C	EFTUD1P1	intron	0.907	0.96483	0.0111	0.001231		7
rs34751999	15:84758419	T/C	EFTUD1P1	intron	0.993	1.07713	0.0121	9.478E-10		7
rs35181082	15:84759255	T/C	EFTUD1P1	intron	0.986	1.07767	0.0123	1.084E-9		6
rs35297609	15:84772896	A/G	EFTUD1P1	intron	0.998	1.07993	0.0122	2.812E-10		7
rs35658069	15:84780146	T/C	EFTUD1P1	intron	0.998	0.92580	0.0122	2.512E-10		7
rs3913457	15:84789465	A/C	EFTUD1P1	intron	0.943	1.00854	0.0124	0.4928		6
rs4106946	15:84788735	A/G	EFTUD1P1	intron	0.991	1.04718	0.0160	0.003853		7
rs4106950	15:84791946	T/G	EFTUD1P1	intron	0.985	0.95581	0.0159	0.004623		7
rs4287531	15:84789274	T/C	EFTUD1P1	intron	0.679	0.96657	0.0291	0.2425		6
rs4402532	15:84783321	A/C	EFTUD1P1	intron	0.941	0.96185	0.0158	0.0139		6
rs58671704	15:84753749	A/T	EFTUD1P1	intron	0.987	1.01664	0.0225	0.4643		7
rs58822714	15:84753744	T/C	EFTUD1P1	intron	0.987	0.98383	0.0225	0.4684		7
rs61116535	15:84762319	A/G	EFTUD1P1	intron	0.915	1.00070	0.0187	0.9709		7
rs62026522	15:84754128	T/G	EFTUD1P1	intron	0.608	0.88303	0.0743	0.09381		7
rs62026523	15:84754222	T/G	EFTUD1P1	intron	0.988	1.02112	0.0154	0.1754		6
rs62026526	15:84760593	T/C	EFTUD1P1	intron	0.987	1.02132	0.0154	0.1714		7
rs62026530	15:84775840	T/G	EFTUD1P1	intron	0.998	0.92589	0.0122	2.669E-10		6
rs62026531	15:84777733	T/C	EFTUD1P1	intron	0.986	0.97093	0.0162	0.06855		2b
rs62026533	15:84784919	A/G	EFTUD1P1	intron	0.987	1.02984	0.0162	0.06999		7
rs62026534	15:84788554	A/G	EFTUD1P1	intron	0.988	1.02030	0.0155	0.1926		7
rs62026536	15:84793672	A/G	EFTUD1P1	intron	0.975	1.08134	0.0125	3.85E-10		6
rs6603020	15:84784562	A/G	EFTUD1P1	intron	0.981	0.98580	0.0121	0.2358		7
rs7173765	15:84764510	T/C	EFTUD1P1	intron	0.991	1.04666	0.0160	0.004333		7
rs72630441	15:84760099	A/T	EFTUD1P1	intron	0.992	1.02071	0.0155	0.1855		6
rs72748670	15:84757262	A/T	EFTUD1P1	intron	0.978	1.04102	0.0153	0.00862		6
rs72748675	15:84778714	A/G	EFTUD1P1	intron	0.981	1.04352	0.0150	0.004531		6
rs79238968	15:84765739	A/G	EFTUD1P1	intron	0.991	0.98482	0.0119	0.1977		7
rs79318564	15:84786150	A/G	EFTUD1P1	intron	0.998	0.92561	0.0122	2.314E-10		5
rs882888	15:84760189	T/C	EFTUD1P1	intron	0.998	0.98659	0.0119	0.2586		6
rs906194	15:84750638	T/C	EFTUD1P1	intron	0.989	1.04592	0.0160	0.004964		4
rs9806618	15:84778891	A/G	EFTUD1P1	intron	0.992	0.99402	0.0124	0.6294		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information