DGCR6

Basic Information

Gene Symbol	DGCR6
Entrez Id	8214
Position	chr22:18893736..18899601
Description	DiGeorge syndrome critical region gene 6
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs185726629	22:18892051	T/G	DGCR6	near-gene-5	0.830	0.97326	0.0456	0.5526		-
rs1974680	22:18895563	A/G	DGCR6	intron	0.820	1.01177	0.0132	0.3765		5
rs2077009	22:18896362	T/C	DGCR6	intron	0.637	0.96735	0.0372	0.3733		4
rs2080346	22:18892575	A/G	DGCR6	near-gene-5	0.819	1.01035	0.0133	0.4374		5
rs2238728	22:18895153	C/G	DGCR6	intron	0.680	1.02419	0.0419	0.5683		5
rs34600027	22:18892251	D/I3	DGCR6	near-gene-5	0.786	1.00592	0.0175	0.7357		-
rs380554	22:18892948	T/C	DGCR6	near-gene-5	0.825	1.01521	0.0125	0.2267		7
rs3810600	22:18893248	A/G	DGCR6	near-gene-5	0.827	1.01654	0.0129	0.2044		4
rs3890992	22:18896605	T/C	DGCR6	intron	0.790	1.00823	0.0175	0.6399		5
rs407895	22:18893631	T/C	DGCR6	near-gene-5	0.794	0.98629	0.0122	0.2598		4
rs408469	22:18893902	C/G	DGCR6	coding-synon	0.899	1.02768	0.0302	0.367		4
rs41277586	22:18898523	T/C	DGCR6	coding-synon	0.752	1.02419	0.0355	0.5014		5
rs413280	22:18897228	A/C	DGCR6	intron	0.835	0.98639	0.0125	0.273		5
rs416659	22:18894600	C/G	DGCR6	intron	0.836	0.98295	0.0125	0.1674		4
rs418052	22:18895142	C/G	DGCR6	intron	0.901	0.97151	0.0301	0.337		5
rs418623	22:18895227	T/C	DGCR6	intron	0.846	0.99094	0.0118	0.4374		5
rs419208	22:18897292	A/G	DGCR6	intron	0.836	0.99263	0.0118	0.5312		5
rs421046	22:18898064	A/G	DGCR6	intron	0.804	0.95628	0.0238	0.06015		5
rs423923	22:18895555	C/G	DGCR6	intron	0.900	1.02819	0.0302	0.357		5
rs424512	22:18895703	T/C	DGCR6	intron	0.823	1.01035	0.0117	0.381		2b
rs425576	22:18896189	T/C	DGCR6	intron	0.819	1.00652	0.0119	0.5854		3a
rs426065	22:18896169	T/C	DGCR6	intron	0.818	0.99352	0.0119	0.5869		2b
rs438673	22:18892019	T/C	DGCR6	near-gene-5	0.739	0.98285	0.0170	0.3085		5
rs441862	22:18898289	C/G	DGCR6	intron	0.828	0.96117	0.0217	0.06782		5
rs73155293	22:18896087	T/C	DGCR6	intron	0.874	1.01582	0.0199	0.4293		4
rs8135825	22:18892211	A/G	DGCR6	near-gene-5	0.678	1.02265	0.0409	0.5847		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
18668038	GWAS	3391 cases; 3181 controls
18511947	GWAS	359 cases; 718 controls
19181681	GWAS	471 cases; 2792 controls
Reference	Study type	Sample size

eQTL Information