CTNND1

Basic Information

Gene Symbol	CTNND1
Entrez Id	1500
Position	chr11:57529234..57586652
Description	catenin (cadherin-associated protein), delta 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10792112	11:57565800	T/C	CTNND1	intron	1.000	1.06088	0.0113	1.606E-7		7
rs10896644	11:57563991	T/C	CTNND1	coding-synon,ncRNA	1.010	0.96089	0.0109	0.0002409		7
rs10896647	11:57571883	T/C	CTNND1	intron	1.010	1.06024	0.0113	2.087E-7		7
rs112976685	11:57564836	A/G	CTNND1	intron	1.000	0.96223	0.0109	0.0004071		6
rs11570196	11:57564596	T/G	CTNND1	intron	0.837	0.98511	0.0311	0.6284		7
rs117394301	11:57580009	C/G	CTNND1	intron	0.869	0.98393	0.0469	0.7302		6
rs1268667	11:57575099	A/G	CTNND1	intron	0.859	1.03655	0.0124	0.003851		6
rs36105845	11:57570850	A/G	CTNND1	intron	0.760	1.01796	0.0274	0.5152		6
rs3781885	11:57570680	T/C	CTNND1	intron	0.995	1.06184	0.0115	1.745E-7		7
rs483030	11:57566850	A/G	CTNND1	intron	0.999	1.02224	0.0121	0.07		4
rs501054	11:57561106	T/G	CTNND1	intron	1.000	0.97814	0.0121	0.06875		4
rs58132137	11:57564797	A/G	CTNND1	intron	0.944	0.98324	0.0123	0.1715		6
rs623541	11:57581613	A/C	CTNND1	intron	1.010	1.03800	0.0109	0.0005913		7
rs641321	11:57569954	A/C	CTNND1	intron	0.790	1.04728	0.0459	0.3141		7
rs653889	11:57570430	A/G	CTNND1	intron	1.010	1.04060	0.0109	0.0002492		7
rs658936	11:57580560	T/G	CTNND1	intron	1.000	0.96348	0.0109	0.0006219		6
rs708228	11:57585662	T/C	CTNND1	ncRNA,untranslated-3	1.010	1.06131	0.0113	1.291E-7		6
rs79344679	11:57570228	A/G	CTNND1	intron	0.806	1.03396	0.0312	0.2836		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information