CSPG4P11

Basic Information

Gene Symbol	CSPG4P11
Entrez Id	100631254
Position	chr15:84855507..84860930
Description	chondroitin sulfate proteoglycan 4 pseudogene 11
Gene type	pseudo

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs144181289	15:84862279	A/C	CSPG4P11	intron	0.893	0.93351	0.0133	2.496E-7		-
rs62028100	15:84860954	A/G	CSPG4P11	intron	0.947	0.93053	0.0124	6.429E-9		7
rs62028101	15:84861420	C/G	CSPG4P11	intron	0.951	1.07648	0.0123	2.304E-9		7
rs71408826	15:84867183	C/G	CSPG4P11	intron,near-gene-3	0.880	0.96002	0.0122	0.00081		7
rs75439919	15:84861344	T/C	CSPG4P11	intron	0.672	0.96938	0.0286	0.2769		7
rs77124390	15:84864026	A/T	CSPG4P11	intron	0.931	1.04071	0.0135	0.003058		5
rs77389195	15:84861341	C/G	CSPG4P11	intron	0.672	1.03149	0.0286	0.2783		7
rs77469967	15:84860763	T/C	CSPG4P11	ncRNA	0.777	1.06567	0.0127	6.117E-7		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information