Gene Symbol | COX11P1 |
---|---|
Entrez Id | 140468 |
Position | chr6:28414697..28415407 |
Description | COX11 cytochrome c oxidase copper chaperone pseudogene 1 |
Gene type | pseudo |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
---|---|---|---|---|---|---|---|---|---|---|
rs1361387 | 6:28412929 | T/G | COX11P1 | near-gene-5 | 1.000 | 1.07466 | 0.0106 | 1.136E-11 | ![]() | 6 |
rs149356531 | 6:28416120 | C/G | COX11P1 | near-gene-3 | 0.776 | 0.90737 | 0.0275 | 0.0004027 | ![]() | - |
rs17316033 | 6:28416049 | A/G | COX11P1 | near-gene-3 | 1.000 | 1.00662 | 0.0226 | 0.7688 | ![]() | 6 |
rs6939966 | 6:28415885 | A/G | COX11P1 | near-gene-3 | 1.000 | 1.07961 | 0.0111 | 4.379E-12 | ![]() | 7 |
SNP | Position | Alelle | Gene | Annotation | Info | Or | Se | P-value | eQTL | Score* |
score | supporting data | score | supporting data |
---|---|---|---|
1a | eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak | 6 | other |
2a | TF binding + matched TF motif + matched DNase Footprint + DNase peak | 5 | TF binding or DNase peak |
1b | eQTL + TF binding + any motif + DNase Footprint + DNase peak | 4 | TF binding + DNase peak |
2b | TF binding + any motif + DNase Footprint + DNase peak | 3b | TF binding + matched TF motif |
1c | eQTL + TF binding + matched TF motif + DNase peak | 1f | eQTL + TF binding / DNase peak |
2c | TF binding + matched TF motif + DNase peak | 3a | TF binding + any motif + DNase peak |
1d | eQTL + TF binding + any motif + DNase peak | 1e | eQTL + TF binding + matched TF motif |
The gene is not affected by CNV!