CKAP5

Basic Information

Gene Symbol	CKAP5
Entrez Id	9793
Position	chr11:46765084..46867843
Description	cytoskeleton associated protein 5
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10466476	11:46781718	A/T	CKAP5	intron	0.997	0.91512	0.0189	2.775E-6		7
rs10466477	11:46782472	A/C	CKAP5	intron	0.998	1.09330	0.0189	2.337E-6		7
rs10734548	11:46787573	T/C	CKAP5	intron	0.999	1.01898	0.0123	0.1275		1f
rs10734549	11:46822686	A/C	CKAP5	intron	0.999	0.98118	0.0123	0.1243		1f
rs10769208	11:46822240	T/C	CKAP5	intron	0.999	1.01898	0.0123	0.1272		6
rs10838619	11:46812807	T/G	CKAP5	intron	0.748	0.99790	0.0126	0.8651		6
rs10838620	11:46818098	A/G	CKAP5	intron	0.999	0.98128	0.0123	0.1256		7
rs10838621	11:46851459	T/C	CKAP5	intron	0.995	0.96938	0.0112	0.005413		6
rs10838622	11:46856536	T/C	CKAP5	intron	0.955	1.03376	0.0114	0.003672		5
rs11038985	11:46771358	T/G	CKAP5	intron	0.994	0.91439	0.0189	2.181E-6		5
rs11038987	11:46792695	A/T	CKAP5	intron	0.999	0.91457	0.0189	2.287E-6		6
rs11038989	11:46803710	A/C	CKAP5	intron	0.811	0.95801	0.0362	0.2357		6
rs11038990	11:46804761	T/C	CKAP5	intron	0.837	1.00934	0.0189	0.6213		6
rs11038993	11:46810916	A/C	CKAP5	intron	0.997	0.97229	0.0107	0.008391		7
rs11038994	11:46818870	T/C	CKAP5	intron	1.000	1.03915	0.0152	0.01129		7
rs11038999	11:46843512	T/C	CKAP5	intron	0.995	0.96204	0.0152	0.01058		5
rs11039000	11:46844312	A/G	CKAP5	intron	0.684	0.99114	0.0129	0.4893		5
rs11039002	11:46857279	T/C	CKAP5	intron	0.995	1.04102	0.0151	0.007925		6
rs112507008	11:46784448	T/G	CKAP5	intron,near-gene-5	0.988	1.11572	0.0564	0.05232		6
rs114488277	11:46858416	T/C	CKAP5	intron	0.993	1.11416	0.0560	0.05328		7
rs114959916	11:46783476	T/C	CKAP5	intron,near-gene-3	0.988	1.11572	0.0564	0.05231		6
rs115346310	11:46850165	T/C	CKAP5	intron	0.992	0.89781	0.0560	0.05395		5
rs116426561	11:46858925	T/C	CKAP5	intron	0.974	0.90457	0.0575	0.08125		6
rs117734176	11:46864672	T/C	CKAP5	intron	0.656	0.89942	0.0418	0.01115		7
rs117757755	11:46816240	C/G	CKAP5	intron	0.668	0.99621	0.0399	0.9233		6
rs117937213	11:46792833	A/G	CKAP5	intron	0.812	1.03004	0.0299	0.3227		7
rs118038329	11:46845814	T/C	CKAP5	intron	0.815	1.10606	0.0508	0.04733		6
rs11822959	11:46806553	T/C	CKAP5	intron	0.999	1.09538	0.0189	1.376E-6		6
rs11824327	11:46864705	T/C	CKAP5	intron	0.998	0.91585	0.0189	3.226E-6		6
rs12287376	11:46857059	T/C	CKAP5	intron	0.998	1.09308	0.0189	2.449E-6		7
rs12574512	11:46768405	A/G	CKAP5	intron	0.997	0.96262	0.0152	0.01204		7
rs12575609	11:46807378	T/C	CKAP5	intron	1.000	0.96233	0.0152	0.01134		6
rs12575721	11:46823681	T/C	CKAP5	intron	0.987	0.96483	0.0176	0.04186		6
rs12577603	11:46847279	A/G	CKAP5	intron	0.992	0.96175	0.0174	0.02532		7
rs12577969	11:46820788	A/G	CKAP5	intron	0.988	1.03769	0.0175	0.03464		6
rs12796154	11:46831556	C/G	CKAP5	intron	0.749	1.07466	0.0258	0.005191		7
rs12806577	11:46856001	T/C	CKAP5	intron	0.992	0.98147	0.0123	0.1303		7
rs137876009	11:46792735	A/G	CKAP5	intron	0.984	0.94242	0.0636	0.3517		-
rs138182008	11:46814123	A/C	CKAP5	intron	0.724	0.98187	0.0663	0.7822		-
rs138740335	11:46791376	C/G	CKAP5	intron	0.663	1.07058	0.0476	0.1521		-
rs139103335	11:46821110	T/C	CKAP5	intron	0.724	0.84942	0.0551	0.00304		-
rs139451895	11:46857947	A/G	CKAP5	intron	0.672	1.06205	0.0571	0.292		-
rs139937086	11:46845213	A/T	CKAP5	intron	0.992	0.89781	0.0560	0.05394		-
rs143979107	11:46843346	A/T	CKAP5	intron	0.732	1.05380	0.0506	0.2998		-
rs144664323	11:46839516	T/C	CKAP5	intron	0.693	0.91814	0.0392	0.02949		-
rs144987443	11:46806215	T/C	CKAP5	coding-synon	0.687	0.90195	0.0632	0.1024		-
rs145005311	11:46812122	T/C	CKAP5	coding-synon	0.816	0.90276	0.0508	0.0438		-
rs146218162	11:46785693	A/G	CKAP5	intron,near-gene-5	0.834	0.92155	0.0450	0.06939		-
rs147353367	11:46857814	C/G	CKAP5	intron	0.716	1.02245	0.0660	0.736		-
rs147781336	11:46770274	A/G	CKAP5	intron	0.672	0.90883	0.0371	0.009915		-
rs148300248	11:46809446	A/C	CKAP5	intron	0.820	1.01197	0.0479	0.8032		-
rs148928134	11:46824983	A/G	CKAP5	intron	0.735	0.94971	0.0562	0.3592		-
rs149120223	11:46806426	A/G	CKAP5	intron	0.759	1.07326	0.0536	0.1872		-
rs149315898	11:46823950	A/C	CKAP5	intron	0.662	1.07176	0.0475	0.145		-
rs150058248	11:46781414	A/G	CKAP5	intron	0.666	1.04248	0.0522	0.4252		-
rs150228583	11:46818081	A/G	CKAP5	intron	0.666	0.99491	0.0397	0.8969		-
rs1551744	11:46865000	A/G	CKAP5	intron	0.997	0.98206	0.0123	0.1431		6
rs186843587	11:46812258	A/G	CKAP5	intron	0.607	0.92210	0.0532	0.1276		-
rs190526864	11:46807909	T/G	CKAP5	intron	0.842	0.99990	0.0586	0.9986		-
rs4075619	11:46816670	A/G	CKAP5	intron	0.997	0.98128	0.0123	0.1251		6
rs4076557	11:46764649	T/C	CKAP5	near-gene-3	0.997	0.96214	0.0152	0.01102		5
rs4128315	11:46837201	T/C	CKAP5	intron	0.996	0.91466	0.0189	2.271E-6		6
rs4294527	11:46828799	A/T	CKAP5	intron	0.998	1.01877	0.0123	0.1321		7
rs4382863	11:46837557	T/C	CKAP5	intron	0.944	1.01258	0.0170	0.4628		7
rs4453193	11:46787406	C/G	CKAP5	intron	1.000	1.03894	0.0152	0.01184		5
rs4453194	11:46787374	C/G	CKAP5	intron	0.994	1.03717	0.0152	0.01668		5
rs4469848	11:46836747	T/C	CKAP5	intron	0.999	1.03894	0.0151	0.0116		6
rs4500447	11:46776093	A/G	CKAP5	intron,near-gene-5	0.998	0.91466	0.0189	2.332E-6		7
rs4506602	11:46815633	T/C	CKAP5	intron	0.985	0.97297	0.0107	0.01068		6
rs4534535	11:46788691	T/C	CKAP5	intron	1.000	0.96252	0.0152	0.01183		7
rs4752932	11:46773354	T/C	CKAP5	intron	0.998	1.03956	0.0152	0.01062		7
rs4752933	11:46803785	A/G	CKAP5	intron	1.000	0.96214	0.0152	0.01096		7
rs4752934	11:46808024	A/G	CKAP5	intron	0.993	1.11438	0.0561	0.05345		6
rs4752935	11:46813717	T/C	CKAP5	intron	0.993	0.89736	0.0561	0.05338		7
rs4752936	11:46821078	A/C	CKAP5	intron	1.000	1.04019	0.0152	0.009394		7
rs4752937	11:46830675	T/C	CKAP5	intron	0.994	1.11739	0.0560	0.04741		4
rs4752940	11:46847715	C/G	CKAP5	intron	1.000	0.96214	0.0151	0.01077		6
rs4752941	11:46855123	A/G	CKAP5	intron	0.993	0.96214	0.0152	0.01117		7
rs59197251	11:46844849	T/C	CKAP5	intron	0.998	1.09330	0.0189	2.33E-6		7
rs61593070	11:46836611	T/C	CKAP5	intron	0.991	0.96262	0.0175	0.02949		6
rs61884327	11:46766890	T/C	CKAP5	intron	0.973	0.96310	0.0183	0.03986		7
rs61884328	11:46783435	T/C	CKAP5	intron	0.986	0.96503	0.0182	0.05		7
rs61897302	11:46798230	T/C	CKAP5	intron	0.997	1.08785	0.0190	9.484E-6		6
rs61897303	11:46800460	A/G	CKAP5	intron	0.999	0.91494	0.0189	2.54E-6		5
rs61897304	11:46809210	A/G	CKAP5	intron	0.999	0.91485	0.0189	2.486E-6		6
rs61897306	11:46823857	T/C	CKAP5	intron	0.941	1.02984	0.0190	0.1217		6
rs61897307	11:46832158	A/C	CKAP5	intron	0.978	1.04321	0.0181	0.01925		7
rs61897308	11:46834251	A/G	CKAP5	intron	0.996	1.08817	0.0190	8.927E-6		6
rs61898461	11:46858973	A/G	CKAP5	intron	0.989	0.96262	0.0175	0.02985		6
rs6485690	11:46798631	A/G	CKAP5	intron	0.998	1.03045	0.0112	0.007218		1e
rs6485692	11:46804583	C/G	CKAP5	intron	0.999	0.98167	0.0123	0.134		3a
rs6485695	11:46836165	T/C	CKAP5	intron	0.999	0.98157	0.0123	0.1317		5
rs6485696	11:46842045	T/C	CKAP5	intron	0.994	0.96909	0.0112	0.005044		6
rs6485697	11:46855044	T/G	CKAP5	intron	0.994	0.97912	0.0123	0.08661		6
rs7101374	11:46824241	A/G	CKAP5	intron	0.999	0.98196	0.0123	0.141		6
rs7105052	11:46808600	T/C	CKAP5	intron	0.996	0.91622	0.0189	3.789E-6		5
rs7105217	11:46838838	A/T	CKAP5	intron	0.998	1.09341	0.0189	2.264E-6		7
rs7108147	11:46830847	A/G	CKAP5	intron	0.998	1.09341	0.0189	2.268E-6		6
rs7109707	11:46818814	A/G	CKAP5	intron	0.999	0.98157	0.0123	0.1309		6
rs7111517	11:46803708	A/C	CKAP5	intron	0.934	0.99213	0.0123	0.5195		6
rs7129622	11:46828895	A/G	CKAP5	intron	0.998	0.91411	0.0189	1.983E-6		6
rs71452738	11:46773739	T/C	CKAP5	intron	0.604	1.02102	0.0149	0.1633		6
rs71474191	11:46764957	T/C	CKAP5	near-gene-3	0.785	1.05749	0.0330	0.08993		7
rs72895811	11:46774672	T/C	CKAP5	intron,near-gene-3	0.976	0.99005	0.0169	0.5548		7
rs72895830	11:46823945	T/C	CKAP5	intron	0.918	1.00854	0.0179	0.6349		6
rs73456126	11:46814785	A/G	CKAP5	intron	0.998	0.91457	0.0189	2.255E-6		6
rs75439556	11:46797541	A/C	CKAP5	intron	0.946	1.02973	0.0189	0.1221		7
rs75775957	11:46799287	T/C	CKAP5	intron	0.883	1.07026	0.0342	0.04697		7
rs77285996	11:46766701	A/G	CKAP5	intron	0.814	0.96657	0.0304	0.2627		5
rs78279886	11:46818631	A/T	CKAP5	intron	0.826	1.01633	0.0238	0.4967		6
rs78406812	11:46823716	A/G	CKAP5	intron	0.755	1.04029	0.0547	0.4704		6
rs78500566	11:46769788	A/C	CKAP5	intron	0.998	1.03904	0.0152	0.0115		6
rs7940578	11:46812227	T/C	CKAP5	intron	0.999	1.01949	0.0123	0.1184		6
rs7941894	11:46805673	A/C	CKAP5	intron	0.984	0.98147	0.0124	0.1312		7
rs79625022	11:46820783	A/G	CKAP5	intron	0.886	1.12277	0.0348	0.0008795		7
rs9735937	11:46809382	A/G	CKAP5	intron	0.995	1.09439	0.0189	1.766E-6		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information