CHL1

Basic Information

Gene Symbol	CHL1
Entrez Id	10752
Position	chr3:238650..451098
Description	cell adhesion molecule L1-like
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1006034	3:240663	A/G	CHL1	intron	0.975	1.00250	0.0167	0.8794		5
rs10510164	3:340536	T/C	CHL1	intron	0.994	1.01816	0.0170	0.2881		6
rs10510187	3:372029	A/G	CHL1	intron	0.993	0.99233	0.0171	0.6534		7
rs10865846	3:384918	A/G	CHL1	intron	0.789	1.00160	0.0119	0.895		6
rs11129766	3:435143	A/G	CHL1	intron	0.909	0.98314	0.0428	0.6911		7
rs111422896	3:283953	C/G	CHL1	intron	0.653	1.01542	0.0383	0.6888		7
rs111487345	3:283431	A/G	CHL1	intron	0.734	1.02470	0.0360	0.4984		6
rs112107270	3:262163	T/C	CHL1	intron	0.983	0.97961	0.0193	0.2866		7
rs112163649	3:290441	T/C	CHL1	intron,near-gene-3	0.912	1.00612	0.0367	0.8681		7
rs112752491	3:280850	A/G	CHL1	intron	0.982	0.98639	0.0195	0.4833		6
rs113140243	3:328224	A/G	CHL1	intron	0.932	0.97590	0.0506	0.6295		7
rs113377295	3:261467	T/C	CHL1	intron	0.929	0.99164	0.0228	0.7135		7
rs113619785	3:441745	A/C	CHL1	intron	0.872	1.01542	0.0501	0.7604		6
rs114002754	3:344758	T/G	CHL1	intron	0.975	1.00090	0.0208	0.9642		7
rs114058420	3:271400	T/C	CHL1	intron	0.984	1.01542	0.0195	0.4326		7
rs114118557	3:311210	A/C	CHL1	intron	0.988	0.97638	0.0257	0.354		6
rs114376132	3:444942	A/T	CHL1	intron	0.846	1.02020	0.0571	0.7262		7
rs114580920	3:259122	T/C	CHL1	intron	0.928	1.00421	0.0274	0.879		6
rs114611342	3:316568	A/G	CHL1	intron	0.914	1.06524	0.0424	0.1364		7
rs114677046	3:386959	T/C	CHL1	intron	0.752	1.00381	0.0607	0.9503		7
rs114965855	3:331992	T/G	CHL1	intron	0.886	0.97190	0.0345	0.409		5
rs115054408	3:428811	T/C	CHL1	intron,near-gene-5	0.822	0.96996	0.0564	0.5893		6
rs115065018	3:290217	A/G	CHL1	intron,ncRNA	0.968	0.99352	0.0249	0.7944		7
rs115073811	3:444248	A/G	CHL1	intron	0.846	1.01816	0.0569	0.7523		6
rs115281372	3:334649	A/G	CHL1	intron	0.852	0.96483	0.0557	0.52		7
rs115328619	3:259001	A/C	CHL1	intron	0.958	1.04530	0.0397	0.265		7
rs115357599	3:430968	T/C	CHL1	coding-synon	0.943	0.99720	0.0504	0.9551		5
rs115480918	3:278755	A/G	CHL1	intron	0.835	1.03128	0.0596	0.6052		5
rs115512628	3:245669	A/G	CHL1	intron	0.981	0.99820	0.0220	0.9348		6
rs115553541	3:330287	A/G	CHL1	intron	0.873	0.96580	0.0459	0.4493		2b
rs115618045	3:317872	T/G	CHL1	intron	0.850	0.96609	0.0600	0.5653		6
rs115838372	3:276237	T/C	CHL1	intron	0.968	1.01735	0.0368	0.6399		6
rs116200601	3:282410	A/G	CHL1	intron	0.968	1.00985	0.0353	0.7825		7
rs116294504	3:308634	T/G	CHL1	intron	0.894	0.95428	0.0402	0.2442		7
rs116294962	3:345773	T/C	CHL1	intron	0.904	0.97317	0.0350	0.438		7
rs116424257	3:428511	T/C	CHL1	intron,near-gene-5	0.918	1.00381	0.0509	0.9404		7
rs116532213	3:441879	A/T	CHL1	intron	0.870	1.02183	0.0510	0.672		7
rs116619437	3:367622	A/G	CHL1	intron	0.903	0.97229	0.0369	0.4469		6
rs116707746	3:266773	T/C	CHL1	intron	0.626	1.01126	0.0490	0.8192		7
rs116720143	3:444912	T/C	CHL1	intron	0.864	1.00652	0.0621	0.9163		7
rs11917787	3:253919	A/G	CHL1	intron	0.986	1.00531	0.0166	0.7498		6
rs11923221	3:378967	A/G	CHL1	intron	0.664	1.03583	0.0372	0.344		7
rs11923228	3:378999	C/G	CHL1	intron	0.880	0.99054	0.0181	0.6023		6
rs11929364	3:320201	A/C	CHL1	intron	0.980	1.03811	0.0194	0.05387		2b
rs12374186	3:284124	A/C	CHL1	intron	0.644	1.00562	0.0140	0.6866		7
rs12488723	3:431740	T/C	CHL1	intron	0.948	0.96889	0.0300	0.2925		7
rs12490993	3:402884	A/G	CHL1	intron	0.971	1.00070	0.0109	0.9498		7
rs12491604	3:437339	A/G	CHL1	intron	0.863	0.99621	0.0162	0.8128		5
rs12491630	3:282178	A/G	CHL1	intron	0.993	0.99910	0.0106	0.9343		7
rs12492566	3:240228	C/G	CHL1	intron	0.920	1.00803	0.0110	0.4686		2b
rs12494297	3:377792	T/C	CHL1	intron	0.987	0.99124	0.0173	0.6107		7
rs12494574	3:280701	T/C	CHL1	intron	0.992	0.98926	0.0108	0.3211		6
rs12494871	3:276528	A/G	CHL1	intron	0.994	1.02337	0.0142	0.103		6
rs12495472	3:281816	A/T	CHL1	intron	0.992	1.01035	0.0108	0.3401		7
rs12496555	3:278154	A/G	CHL1	intron	0.996	0.98965	0.0108	0.3351		6
rs12496575	3:278270	A/G	CHL1	intron	1.000	0.98383	0.0114	0.1527		6
rs12496968	3:250713	T/C	CHL1	intron	0.996	1.00411	0.0108	0.7019		6
rs12497412	3:278334	T/C	CHL1	intron	0.996	0.98955	0.0108	0.3327		7
rs12497697	3:264192	A/G	CHL1	intron	0.988	0.97697	0.0124	0.06034		7
rs12630204	3:318347	T/C	CHL1	intron	0.841	0.96031	0.0204	0.0471		6
rs12631268	3:318317	A/C	CHL1	intron	0.739	1.00150	0.0123	0.9046		6
rs12633628	3:328267	A/C	CHL1	intron	0.971	0.96628	0.0180	0.0563		7
rs12637355	3:342281	A/G	CHL1	intron	0.981	1.01278	0.0165	0.4422		7
rs13060510	3:279638	A/T	CHL1	intron	0.994	1.01076	0.0108	0.3209		6
rs13060666	3:279712	T/C	CHL1	intron	0.994	0.98916	0.0108	0.3147		6
rs13061475	3:270928	C/G	CHL1	intron	0.991	1.03004	0.0151	0.04951		6
rs13061580	3:391573	A/G	CHL1	intron	0.951	0.99193	0.0116	0.4893		5
rs13062390	3:280054	T/C	CHL1	intron	0.994	1.01056	0.0108	0.3327		7
rs13064013	3:283284	T/G	CHL1	intron	0.982	1.00985	0.0109	0.3659		7
rs13066151	3:301385	C/G	CHL1	intron	0.987	1.05180	0.0272	0.06299		7
rs13066759	3:391526	T/C	CHL1	intron	0.951	0.99283	0.0116	0.5343		6
rs13069075	3:266924	A/G	CHL1	intron	0.982	1.05654	0.0223	0.01354		7
rs13071211	3:340579	A/C	CHL1	intron	0.952	0.95945	0.0286	0.1479		7
rs13071536	3:399143	T/C	CHL1	intron	0.914	0.97814	0.0136	0.1049		7
rs13072223	3:279586	C/G	CHL1	intron	0.994	1.01096	0.0108	0.3135		7
rs13072760	3:360488	A/G	CHL1	intron,near-gene-5	0.975	0.99283	0.0129	0.5767		7
rs13072907	3:279924	A/G	CHL1	intron	0.994	1.01056	0.0108	0.3322		7
rs13073026	3:367825	T/G	CHL1	intron	0.967	1.00220	0.0165	0.8956		7
rs13074215	3:239798	C/G	CHL1	intron	0.929	0.99890	0.0175	0.9494		5
rs13075681	3:403091	A/G	CHL1	intron	0.786	1.00030	0.0120	0.9799		6
rs13076578	3:280354	A/T	CHL1	intron	0.993	1.01076	0.0108	0.3245		6
rs13077665	3:277878	C/G	CHL1	intron	0.996	0.98975	0.0108	0.3393		7
rs13078683	3:275511	T/G	CHL1	intron	0.993	0.98560	0.0108	0.1803		7
rs13078884	3:391586	A/G	CHL1	intron	0.952	1.00813	0.0116	0.4855		3a
rs13079043	3:391617	A/G	CHL1	intron	0.951	1.00813	0.0116	0.4894		4
rs13079827	3:276732	A/T	CHL1	intron	0.912	0.98639	0.0111	0.2195		6
rs13080195	3:358628	A/G	CHL1	intron	0.976	1.00100	0.0163	0.9491		6
rs13080225	3:358687	A/G	CHL1	intron	0.976	1.00100	0.0163	0.9499		6
rs13081885	3:318294	T/C	CHL1	intron	0.854	0.99233	0.0116	0.5064		6
rs13082190	3:251422	C/G	CHL1	intron	0.972	0.99183	0.0114	0.4691		7
rs13083041	3:253920	T/C	CHL1	intron	0.993	0.98472	0.0107	0.1503		6
rs13083718	3:399171	A/G	CHL1	intron	0.977	1.00612	0.0108	0.5729		7
rs13084688	3:242241	A/G	CHL1	intron	0.988	0.99571	0.0106	0.6827		7
rs13085405	3:277567	A/G	CHL1	intron	0.986	0.95361	0.0218	0.02957		7
rs13086886	3:383061	A/G	CHL1	intron	0.858	1.00351	0.0140	0.8044		7
rs13089564	3:310946	A/G	CHL1	intron	0.991	1.02706	0.0189	0.1574		7
rs13091018	3:277659	T/C	CHL1	intron	0.991	0.98837	0.0108	0.2808		7
rs13091102	3:300552	T/C	CHL1	intron	0.891	0.95037	0.0258	0.04863		5
rs13091217	3:277778	T/C	CHL1	intron	0.995	0.98886	0.0108	0.2993		6
rs13091420	3:277889	T/C	CHL1	intron	0.996	0.99005	0.0108	0.3531		7
rs13092689	3:403069	T/C	CHL1	intron	0.723	0.99114	0.0129	0.4909		6
rs13093824	3:253154	A/G	CHL1	intron	0.987	0.99432	0.0118	0.6273		6
rs13093895	3:343022	T/C	CHL1	intron	1.000	0.99134	0.0111	0.4371		7
rs13097709	3:279511	A/G	CHL1	intron	0.994	0.98916	0.0108	0.3134		7
rs13097913	3:279682	A/C	CHL1	intron	0.998	0.98354	0.0114	0.1466		7
rs13098312	3:302725	A/T	CHL1	intron	0.986	0.94933	0.0269	0.05372		5
rs13099480	3:442800	T/G	CHL1	intron	0.836	1.00030	0.0142	0.9838		7
rs13314498	3:295690	C/G	CHL1	intron	0.987	0.98689	0.0357	0.7125		7
rs13317495	3:294025	A/G	CHL1	intron	0.969	0.99611	0.0126	0.7568		7
rs13317655	3:293948	T/C	CHL1	intron	0.979	0.99511	0.0125	0.6939		6
rs1353810	3:394270	A/T	CHL1	intron	0.953	1.00672	0.0109	0.5412		6
rs1353811	3:381302	A/G	CHL1	intron	0.974	1.00170	0.0120	0.8889		5
rs137893814	3:379738	A/G	CHL1	intron	0.815	1.00180	0.0237	0.9397		-
rs138974991	3:385243	T/C	CHL1	intron	0.745	1.00361	0.0336	0.9156		-
rs139434409	3:318566	T/C	CHL1	intron	0.743	0.91229	0.0628	0.1438		-
rs139703736	3:441079	C/G	CHL1	intron	0.661	0.98403	0.0576	0.7792		-
rs139841446	3:254313	C/G	CHL1	intron	0.674	0.96165	0.0515	0.4475		-
rs139844126	3:395800	A/T	CHL1	intron	0.902	1.04331	0.0362	0.241		-
rs140614907	3:434969	T/C	CHL1	intron	0.754	1.00572	0.0265	0.8309		-
rs140685114	3:307038	A/G	CHL1	intron	0.885	1.00813	0.0493	0.8692		-
rs141081146	3:381147	A/C	CHL1	intron	0.750	0.94356	0.0674	0.3888		-
rs141167078	3:318527	A/G	CHL1	intron	0.789	1.02061	0.0648	0.7529		-
rs141614076	3:398672	A/C	CHL1	intron	0.905	0.98413	0.0470	0.734		-
rs141723934	3:264444	T/C	CHL1	intron	0.726	1.04467	0.0478	0.3606		-
rs141772733	3:284151	T/C	CHL1	intron	0.760	1.01674	0.0154	0.2814		-
rs142251617	3:361493	A/G	CHL1	missense	0.629	0.98000	0.0630	0.7482		-
rs142444535	3:401645	A/G	CHL1	intron	0.783	1.08220	0.0512	0.1226		-
rs142523969	3:312338	T/C	CHL1	intron	0.915	0.99342	0.0240	0.7842		-
rs143105834	3:379416	T/C	CHL1	intron	0.887	0.97385	0.0600	0.6585		-
rs143571725	3:270450	A/G	CHL1	intron	0.772	1.02778	0.0555	0.6214		-
rs143641430	3:442343	A/G	CHL1	intron	0.600	0.87188	0.0537	0.01062		-
rs143824420	3:284249	A/G	CHL1	intron	0.796	1.01806	0.0269	0.5069		-
rs143830892	3:393555	A/T	CHL1	intron	0.899	1.04697	0.0363	0.2055		-
rs144003310	3:398403	A/G	CHL1	intron	0.906	0.98354	0.0470	0.7243		-
rs144243870	3:295082	A/G	CHL1	intron	0.886	1.00421	0.0493	0.9318		-
rs144511355	3:351878	T/C	CHL1	intron	0.635	0.94885	0.0410	0.2008		-
rs144767147	3:380074	T/C	CHL1	intron	0.822	1.02316	0.0499	0.6467		-
rs144885348	3:328056	A/G	CHL1	intron	0.907	1.01990	0.0220	0.3697		-
rs145178561	3:387666	A/G	CHL1	intron	0.655	0.95705	0.0615	0.4755		-
rs145758271	3:438117	A/G	CHL1	intron	0.718	1.06972	0.0572	0.2388		-
rs147129667	3:354195	A/G	CHL1	intron	0.820	1.06759	0.0599	0.2753		-
rs147273834	3:277801	T/G	CHL1	intron	0.938	0.96551	0.0542	0.5176		-
rs147431057	3:369315	A/G	CHL1	intron	0.931	0.96831	0.0489	0.5096		-
rs147808408	3:386809	A/G	CHL1	intron	0.751	1.00361	0.0592	0.9521		-
rs147864871	3:344375	T/C	CHL1	intron	0.980	0.99233	0.0112	0.4921		-
rs148394546	3:313736	A/G	CHL1	intron	0.780	0.89369	0.0593	0.05814		-
rs148399248	3:351879	A/G	CHL1	intron	0.817	1.07133	0.0596	0.2477		-
rs148494229	3:328043	C/G	CHL1	intron	0.707	0.98827	0.0466	0.8001		-
rs148825220	3:282012	A/G	CHL1	intron	0.855	1.04373	0.0594	0.4717		-
rs148959418	3:441977	A/G	CHL1	intron	0.886	0.99810	0.0546	0.9723		-
rs149051803	3:429378	A/T	CHL1	intron,near-gene-5	0.662	0.93548	0.0672	0.3208		-
rs149292554	3:318375	A/G	CHL1	intron	0.698	0.95743	0.0418	0.298		-
rs149453851	3:250293	T/C	CHL1	intron	0.759	1.05897	0.0562	0.308		-
rs150463544	3:286475	A/T	CHL1	intron	0.849	1.00723	0.0646	0.9119		-
rs150510256	3:398982	A/T	CHL1	intron	0.902	0.98570	0.0474	0.7618		-
rs150522953	3:267849	A/G	CHL1	intron	0.837	0.98896	0.0173	0.5184		-
rs150753427	3:379541	T/C	CHL1	intron	0.743	1.02562	0.0249	0.3108		-
rs1553134	3:250542	T/C	CHL1	intron	0.991	1.00874	0.0113	0.4418		6
rs1560765	3:439519	T/G	CHL1	intron	0.889	0.96551	0.0296	0.2352		7
rs162416	3:366039	T/G	CHL1	intron	0.980	1.00985	0.0117	0.4014		6
rs162588	3:364098	A/G	CHL1	intron	0.965	0.99461	0.0137	0.6921		7
rs162589	3:363254	T/C	CHL1	intron	0.978	1.00844	0.0117	0.4753		7
rs162728	3:318343	T/G	CHL1	intron	0.946	1.03138	0.0193	0.1089		6
rs162729	3:318355	A/G	CHL1	intron	0.773	1.00481	0.0122	0.6921		7
rs162730	3:318388	C/G	CHL1	intron	0.634	1.03800	0.0389	0.3378		7
rs162731	3:333145	T/C	CHL1	intron	0.981	0.99760	0.0107	0.824		6
rs162732	3:316524	T/C	CHL1	intron	0.965	1.03128	0.0191	0.1072		7
rs162733	3:256823	A/G	CHL1	intron	0.962	0.97922	0.0146	0.1509		6
rs162737	3:295097	A/G	CHL1	intron	0.994	0.99273	0.0106	0.4901		7
rs162738	3:292992	T/C	CHL1	intron	0.963	1.01450	0.0111	0.196		7
rs162739	3:292792	A/G	CHL1	intron	0.936	0.98236	0.0117	0.1274		7
rs167959	3:293492	A/C	CHL1	intron	0.990	1.00531	0.0106	0.6184		7
rs167975	3:340902	A/T	CHL1	intron	0.995	1.01888	0.0169	0.2677		7
rs1695325	3:261124	A/G	CHL1	intron	0.889	1.00040	0.0163	0.9803		7
rs17006099	3:250372	T/C	CHL1	intron	0.986	0.98551	0.0193	0.4484		6
rs17006157	3:251075	A/G	CHL1	intron	0.987	1.01694	0.0194	0.3887		7
rs17006405	3:253573	A/G	CHL1	intron	0.991	0.98246	0.0194	0.3611		7
rs17006552	3:255106	A/G	CHL1	intron	0.990	0.98265	0.0194	0.3668		6
rs17006985	3:258443	A/T	CHL1	intron	0.987	0.98403	0.0192	0.4014		7
rs17007696	3:262461	T/G	CHL1	intron	0.985	0.99770	0.0106	0.8274		6
rs17007772	3:263222	A/G	CHL1	intron	0.984	0.98049	0.0193	0.3075		7
rs17009026	3:269910	A/C	CHL1	intron	0.983	0.98541	0.0193	0.4447		7
rs17011221	3:277673	C/G	CHL1	intron	0.961	1.02460	0.0352	0.4892		7
rs17012641	3:285596	C/G	CHL1	intron	0.981	0.99432	0.0292	0.8445		7
rs17012651	3:285783	A/G	CHL1	intron	0.901	0.99402	0.0247	0.8094		7
rs17012663	3:285806	T/G	CHL1	intron	0.992	0.99551	0.0118	0.703		7
rs17014759	3:299391	A/T	CHL1	intron	0.988	0.98059	0.0362	0.5883		7
rs17016536	3:308912	A/C	CHL1	intron	0.992	0.99263	0.0106	0.4857		5
rs17016845	3:309858	A/G	CHL1	intron	0.997	1.00672	0.0136	0.6235		7
rs17016917	3:310747	T/C	CHL1	intron	1.000	1.02143	0.0118	0.07297		7
rs17016919	3:310763	C/G	CHL1	intron	0.999	0.98521	0.0142	0.2943		7
rs17016971	3:311515	C/G	CHL1	intron	0.987	0.98236	0.0177	0.3146		7
rs17017010	3:311851	T/G	CHL1	intron	0.995	1.01308	0.0134	0.3317		6
rs17017690	3:316189	T/G	CHL1	intron	0.999	0.98098	0.0171	0.261		6
rs17019407	3:325068	A/G	CHL1	intron	1.000	0.99491	0.0196	0.7945		7
rs17019589	3:326665	T/C	CHL1	intron	0.997	1.00662	0.0122	0.591		7
rs17020608	3:333304	C/G	CHL1	intron	0.977	1.03552	0.0178	0.04969		6
rs17021268	3:336454	C/G	CHL1	intron	0.882	0.98305	0.0248	0.4906		5
rs17021929	3:341836	A/G	CHL1	intron	0.955	1.01258	0.0165	0.4499		5
rs17021964	3:342055	T/C	CHL1	intron	0.981	1.01288	0.0165	0.4393		7
rs17023537	3:348599	A/G	CHL1	intron	0.978	1.02102	0.0182	0.2533		7
rs17028711	3:374052	A/G	CHL1	intron	0.974	0.98403	0.0211	0.4466		6
rs17029096	3:376497	T/C	CHL1	intron	0.994	0.99900	0.0173	0.956		6
rs17029710	3:379848	A/T	CHL1	intron	0.729	0.97912	0.0162	0.1936		5
rs17030343	3:386884	T/C	CHL1	intron	0.765	0.99601	0.0492	0.9346		7
rs17037414	3:435370	T/C	CHL1	intron	0.917	1.03614	0.0399	0.373		6
rs17038038	3:441364	A/G	CHL1	intron	0.884	0.96445	0.0390	0.3528		7
rs17263957	3:254202	T/C	CHL1	intron	0.971	0.95897	0.0195	0.03177		4
rs17264626	3:272256	T/C	CHL1	intron	0.983	0.98847	0.0193	0.5486		6
rs17264828	3:277219	T/C	CHL1	intron	0.997	1.01857	0.0142	0.196		7
rs17264905	3:277746	A/G	CHL1	intron	0.984	1.01157	0.0197	0.5612		7
rs17265134	3:279141	T/C	CHL1	intron	0.987	1.01268	0.0195	0.5167		7
rs17271940	3:283747	A/G	CHL1	intron	0.981	1.00854	0.0126	0.4985		7
rs17273893	3:309363	T/C	CHL1	intron	0.997	1.02829	0.0190	0.1426		7
rs17273983	3:310466	A/G	CHL1	intron	0.989	0.97736	0.0194	0.2392		7
rs17274199	3:313860	T/C	CHL1	intron	0.995	0.97365	0.0189	0.1569		6
rs17274531	3:317841	T/C	CHL1	intron	0.991	1.02901	0.0191	0.1346		7
rs17274959	3:329106	T/C	CHL1	intron	0.804	0.89906	0.0412	0.009809		7
rs17275057	3:330764	A/G	CHL1	intron	0.991	1.00120	0.0205	0.9533		7
rs17275196	3:335265	A/C	CHL1	intron	0.992	0.98708	0.0120	0.2797		6
rs17329226	3:241572	A/C	CHL1	intron	0.989	0.99045	0.0114	0.3974		5
rs17329247	3:241913	A/G	CHL1	intron	0.989	1.00411	0.0106	0.7018		5
rs17329331	3:247241	T/C	CHL1	intron	0.963	0.98089	0.0142	0.1741		7
rs17329688	3:253679	T/C	CHL1	intron	0.944	0.98797	0.0161	0.4509		6
rs17330105	3:260434	A/C	CHL1	intron	0.979	0.97893	0.0112	0.0563		6
rs17331520	3:285287	T/G	CHL1	intron	0.987	0.99601	0.0128	0.7527		3a
rs17334011	3:317688	A/T	CHL1	intron	0.924	1.02041	0.0219	0.3559		6
rs17354487	3:340312	C/G	CHL1	intron	0.981	1.00080	0.0204	0.9695		7
rs17526472	3:371087	A/G	CHL1	intron	0.793	0.95993	0.0279	0.1426		6
rs17527233	3:380572	A/G	CHL1	intron	0.920	0.99980	0.0197	0.9925		7
rs17527865	3:404288	A/G	CHL1	intron	0.912	0.98768	0.0261	0.6356		7
rs17585814	3:370823	T/C	CHL1	intron	0.901	1.03241	0.0368	0.3867		7
rs17586728	3:381622	C/G	CHL1	intron	0.900	1.00170	0.0176	0.9245		7
rs181429634	3:284087	A/G	CHL1	intron	0.617	1.01643	0.0428	0.7025		-
rs183223355	3:318374	T/C	CHL1	intron	0.808	1.00361	0.0631	0.9546		-
rs183732207	3:403142	T/C	CHL1	intron	0.696	0.97990	0.0602	0.7363		-
rs184848383	3:366847	A/C	CHL1	intron	0.838	1.02357	0.0373	0.5316		-
rs185960893	3:284093	T/C	CHL1	intron	0.733	0.94242	0.0462	0.1995		-
rs187503530	3:366408	A/G	CHL1	intron	0.749	1.05760	0.0401	0.1629		-
rs188670945	3:284079	A/G	CHL1	intron	0.676	1.00944	0.0333	0.7775		-
rs189953706	3:267598	A/G	CHL1	intron	0.652	1.08307	0.0675	0.237		-
rs191475998	3:392653	A/G	CHL1	intron	0.872	0.93904	0.0449	0.161		-
rs192073349	3:284036	T/C	CHL1	intron	0.708	1.03780	0.0422	0.3788		-
rs192105112	3:284096	A/G	CHL1	intron	0.658	1.00300	0.0256	0.9082		-
rs192482330	3:397272	T/G	CHL1	intron	0.657	1.04561	0.0270	0.09822		-
rs193098643	3:284051	A/G	CHL1	intron	0.647	1.00371	0.0291	0.8998		-
rs1975192	3:374788	T/G	CHL1	intron	1.000	0.99770	0.0173	0.8938		7
rs1978731	3:434444	T/C	CHL1	intron	0.919	0.99134	0.0428	0.8393		7
rs2055314	3:269035	T/C	CHL1	intron	0.996	1.00391	0.0106	0.7133		6
rs2055315	3:269338	A/C	CHL1	intron	0.997	0.99471	0.0106	0.6139		7
rs2060309	3:379908	T/C	CHL1	intron	0.891	0.99601	0.0182	0.8276		5
rs2060310	3:380003	A/C	CHL1	intron	0.929	1.00321	0.0120	0.791		6
rs2060311	3:380341	A/G	CHL1	intron	0.948	1.00140	0.0118	0.9074		6
rs2060312	3:401533	T/C	CHL1	intron	0.978	1.00200	0.0108	0.8525		3a
rs2063645	3:246374	A/G	CHL1	intron	0.983	1.00240	0.0160	0.881		7
rs2117042	3:389480	C/G	CHL1	intron	0.948	1.00844	0.0117	0.47		6
rs2117044	3:401186	A/G	CHL1	intron	0.977	1.00250	0.0108	0.8181		7
rs2117045	3:364676	A/T	CHL1	intron	0.975	1.00381	0.0129	0.7678		7
rs2117046	3:448527	T/C	CHL1	untranslated-3	0.931	1.07058	0.0394	0.08325		6
rs2133402	3:256258	T/G	CHL1	intron	0.988	0.98423	0.0192	0.4067		7
rs2272522	3:361508	T/C	CHL1	missense	0.988	0.99412	0.0128	0.6433		7
rs2272524	3:391001	A/G	CHL1	intron	0.949	1.00894	0.0117	0.4431		6
rs2293675	3:404658	A/G	CHL1	intron,near-gene-3	0.895	0.99541	0.0141	0.7431		5
rs2387188	3:441553	A/T	CHL1	intron	0.879	1.01258	0.0496	0.8017		5
rs2648465	3:354290	A/G	CHL1	intron	0.983	1.00844	0.0118	0.4762		7
rs2648466	3:353314	A/G	CHL1	intron	0.986	0.98472	0.0154	0.3151		5
rs28393733	3:242246	C/G	CHL1	intron	0.980	1.00070	0.0221	0.9749		6
rs28429064	3:352404	A/T	CHL1	intron	0.956	1.01278	0.0233	0.5876		7
rs28615846	3:352371	A/C	CHL1	intron	0.956	0.98748	0.0234	0.5913		7
rs330891	3:371160	A/G	CHL1	intron	0.974	1.01005	0.0130	0.4426		7
rs330893	3:372448	A/G	CHL1	intron	1.000	0.99940	0.0171	0.9721		6
rs330894	3:372785	A/G	CHL1	intron	0.985	0.99740	0.0189	0.8912		6
rs330895	3:374525	T/C	CHL1	intron	0.993	1.00190	0.0188	0.9204		7
rs330896	3:374544	A/G	CHL1	intron	1.000	0.99750	0.0172	0.8836		7
rs330898	3:374773	T/C	CHL1	intron	0.993	1.00230	0.0188	0.9024		7
rs330900	3:359160	T/G	CHL1	intron	0.982	0.99094	0.0117	0.4344		6
rs330902	3:366190	A/G	CHL1	intron	0.964	1.01593	0.0216	0.464		7
rs331852	3:266237	C/G	CHL1	intron	0.984	1.01674	0.0184	0.3664		7
rs331853	3:265425	A/G	CHL1	intron	0.987	0.98108	0.0183	0.297		5
rs331854	3:265049	A/T	CHL1	intron	0.979	1.00622	0.0184	0.7363		7
rs331855	3:264293	A/G	CHL1	intron	0.979	1.00270	0.0110	0.8044		7
rs331858	3:316550	A/T	CHL1	intron	0.984	1.00020	0.0106	0.9844		7
rs331864	3:272037	A/C	CHL1	intron	0.987	1.01258	0.0346	0.7183		7
rs331865	3:260102	A/C	CHL1	intron	0.990	1.01745	0.0551	0.7539		6
rs331866	3:259011	T/C	CHL1	intron	0.998	1.00803	0.0547	0.8835		6
rs331867	3:256811	A/T	CHL1	intron	0.996	1.02020	0.0545	0.7142		6
rs331868	3:256561	T/C	CHL1	intron	0.995	1.01187	0.0549	0.8291		7
rs331869	3:255395	T/C	CHL1	intron	0.977	0.98344	0.0502	0.7388		7
rs331872	3:326332	A/T	CHL1	intron	0.999	1.00733	0.0113	0.517		5
rs331874	3:327097	T/C	CHL1	intron	0.997	0.99960	0.0107	0.9688		6
rs331876	3:328670	A/G	CHL1	intron	0.994	1.00783	0.0203	0.6998		6
rs331879	3:342377	A/G	CHL1	intron	0.979	1.01379	0.0165	0.4067		5
rs331880	3:342405	T/C	CHL1	intron	0.820	1.02634	0.0201	0.1964		5
rs331883	3:295081	T/C	CHL1	intron	0.993	0.98916	0.0146	0.4546		7
rs331884	3:294625	A/G	CHL1	intron	0.988	0.99910	0.0109	0.9315		6
rs331885	3:294397	T/G	CHL1	intron	0.993	1.01136	0.0146	0.4392		6
rs331886	3:292630	C/G	CHL1	intron	0.968	1.01207	0.0146	0.4122		7
rs331887	3:292247	C/G	CHL1	intron	0.965	0.99452	0.0107	0.6051		7
rs331890	3:338156	T/G	CHL1	intron	0.948	0.99810	0.0108	0.8576		6
rs331891	3:338146	A/T	CHL1	intron	0.948	1.00150	0.0108	0.888		6
rs331892	3:337727	T/C	CHL1	intron	0.994	0.99810	0.0106	0.8618		7
rs331893	3:337310	T/G	CHL1	intron	0.992	0.99521	0.0107	0.6533		7
rs331894	3:336766	T/C	CHL1	intron	0.991	0.99870	0.0107	0.9047		6
rs331895	3:335840	A/C	CHL1	intron	0.993	0.99720	0.0106	0.7933		5
rs331896	3:335197	A/T	CHL1	intron	0.971	0.99730	0.0108	0.8003		6
rs331897	3:279688	A/G	CHL1	intron	0.985	1.00763	0.0117	0.5158		7
rs331898	3:279928	A/G	CHL1	intron	0.988	1.01268	0.0184	0.4938		7
rs331899	3:280781	T/G	CHL1	intron	0.967	1.01562	0.0359	0.6653		7
rs331900	3:280975	A/T	CHL1	intron	0.986	1.01238	0.0184	0.5018		7
rs332449	3:351340	A/G	CHL1	intron	0.937	1.00431	0.0170	0.799		6
rs332450	3:331429	T/G	CHL1	intron	0.995	1.00471	0.0107	0.6587		7
rs332453	3:315016	A/G	CHL1	intron	0.895	1.00100	0.0112	0.9262		7
rs332455	3:273503	A/T	CHL1	intron	0.667	1.01471	0.0305	0.6331		7
rs332457	3:260348	T/C	CHL1	intron	0.987	1.02163	0.0185	0.247		7
rs332476	3:290100	T/G	CHL1	intron,ncRNA	0.986	0.98876	0.0146	0.4381		7
rs332477	3:341158	T/C	CHL1	intron	0.986	1.01735	0.0164	0.2955		7
rs332478	3:341059	T/G	CHL1	intron	0.992	1.02010	0.0168	0.2372		7
rs332479	3:340440	T/C	CHL1	intron	0.996	0.99690	0.0106	0.7709		6
rs332481	3:339058	T/C	CHL1	intron	0.990	1.00040	0.0107	0.9687		7
rs34132249	3:327679	A/G	CHL1	intron	0.968	0.96156	0.0272	0.1494		6
rs34177368	3:397333	C/G	CHL1	intron	0.962	0.99521	0.0110	0.6629		5
rs34185553	3:245201	T/G	CHL1	intron	0.984	1.00461	0.0124	0.7099		6
rs34280780	3:303185	T/G	CHL1	intron	0.980	0.99820	0.0123	0.8839		6
rs34303353	3:349984	T/C	CHL1	intron	0.951	0.98708	0.0186	0.4831		7
rs34374128	3:250786	C/G	CHL1	intron	0.983	0.92515	0.0282	0.005705		6
rs34534829	3:314489	C/G	CHL1	intron	0.995	0.97365	0.0189	0.1571		7
rs34690392	3:284582	T/G	CHL1	intron	0.965	0.99960	0.0107	0.9737		5
rs35073337	3:399966	A/G	CHL1	intron	0.943	1.00451	0.0109	0.6795		5
rs35177888	3:428783	A/G	CHL1	intron,near-gene-5	0.796	1.00944	0.0138	0.4966		7
rs35369595	3:372574	A/G	CHL1	intron	0.998	1.01056	0.0172	0.5398		7
rs35394807	3:251069	A/G	CHL1	intron	0.982	0.92349	0.0281	0.004626		7
rs35454661	3:325539	T/G	CHL1	intron	0.998	1.00763	0.0122	0.5328		6
rs35556277	3:366767	A/G	CHL1	intron	0.989	0.99104	0.0184	0.6238		7
rs35631933	3:312903	C/G	CHL1	intron	0.996	0.97726	0.0189	0.2226		7
rs35674131	3:391658	T/C	CHL1	intron	0.950	1.00803	0.0117	0.4938		4
rs35762438	3:279853	C/G	CHL1	intron	0.995	0.99970	0.0106	0.9765		6
rs35802886	3:360356	T/C	CHL1	intron,near-gene-5	0.976	1.00040	0.0163	0.9823		7
rs35942155	3:262758	A/G	CHL1	intron	0.982	0.94573	0.0223	0.01225		7
rs36092261	3:366986	A/T	CHL1	intron	0.969	1.00411	0.0164	0.7999		6
rs367016	3:296648	A/G	CHL1	intron	0.995	0.98946	0.0145	0.4662		7
rs381233	3:296976	T/C	CHL1	intron	0.996	0.98787	0.0145	0.4018		5
rs381257	3:296951	T/C	CHL1	intron	0.994	0.98787	0.0146	0.4013		5
rs381357	3:354495	A/G	CHL1	intron	0.989	0.99203	0.0120	0.5012		7
rs3821620	3:385245	A/G	CHL1	intron	0.821	0.99342	0.0118	0.5759		7
rs3821621	3:385241	A/G	CHL1	intron	0.884	0.99940	0.0132	0.9665		7
rs3821622	3:377531	A/C	CHL1	intron	0.993	0.99392	0.0134	0.6504		7
rs382679	3:351106	T/C	CHL1	intron	0.916	0.97570	0.0159	0.1208		6
rs3856873	3:444369	T/C	CHL1	intron	0.929	1.06641	0.0396	0.1043		6
rs3856874	3:444481	A/G	CHL1	intron	0.878	1.03087	0.0307	0.3224		6
rs3856877	3:451306	A/G	CHL1	near-gene-3	0.834	1.06109	0.0380	0.1187		6
rs3856878	3:451432	A/G	CHL1	near-gene-3	0.919	1.07423	0.0398	0.07222		6
rs3872649	3:270521	A/G	CHL1	intron	0.994	1.01217	0.0164	0.4614		7
rs3872650	3:271091	A/C	CHL1	intron	0.984	0.99322	0.0172	0.6906		5
rs3872652	3:282512	C/G	CHL1	intron	0.955	1.01035	0.0110	0.3449		7
rs3872654	3:282657	C/G	CHL1	intron	0.991	1.01025	0.0108	0.345		7
rs3872656	3:292958	A/C	CHL1	intron	0.903	1.00310	0.0113	0.7838		7
rs3872667	3:304711	T/G	CHL1	intron	0.983	0.99005	0.0173	0.5657		7
rs3872668	3:314429	C/G	CHL1	intron	0.988	0.99810	0.0110	0.8621		7
rs3889386	3:296157	A/G	CHL1	intron	0.994	0.98827	0.0145	0.4161		7
rs3899107	3:339202	T/C	CHL1	intron	0.976	1.01949	0.0172	0.2625		7
rs3901003	3:295196	A/G	CHL1	intron	0.989	1.00501	0.0130	0.6987		6
rs3901552	3:334289	A/G	CHL1	intron	0.993	0.99005	0.0121	0.4089		7
rs390443	3:282381	T/C	CHL1	intron	0.966	1.01603	0.0359	0.6578		7
rs3913283	3:294630	A/G	CHL1	intron	0.984	1.00803	0.0128	0.5337		7
rs3913285	3:281916	T/C	CHL1	intron	0.991	1.00020	0.0106	0.9866		7
rs3913286	3:316460	T/G	CHL1	intron	0.964	1.03076	0.0191	0.113		7
rs3915678	3:285580	A/T	CHL1	intron	0.988	0.99501	0.0119	0.6758		7
rs392670	3:356565	A/T	CHL1	intron	0.897	0.99880	0.0111	0.9118		6
rs393254	3:300949	A/G	CHL1	intron	0.981	0.99551	0.0109	0.683		6
rs3933034	3:330037	T/G	CHL1	intron	1.000	0.99461	0.0109	0.6234		6
rs3933036	3:329422	C/G	CHL1	intron	0.992	0.99293	0.0111	0.5214		6
rs3934035	3:306714	T/C	CHL1	intron	0.990	0.98452	0.0177	0.3775		3a
rs3956142	3:310616	A/G	CHL1	intron	1.000	0.99760	0.0121	0.8447		7
rs3956143	3:311248	T/G	CHL1	intron	0.994	1.01005	0.0122	0.4116		7
rs3956145	3:247875	A/G	CHL1	intron	0.994	1.01979	0.0544	0.7191		7
rs4002784	3:444252	T/C	CHL1	intron	0.921	1.07487	0.0393	0.06599		6
rs4002871	3:295654	A/T	CHL1	intron	0.994	0.98876	0.0145	0.4373		7
rs4002882	3:311212	A/C	CHL1	intron	0.877	1.01430	0.0131	0.2796		6
rs4003413	3:280987	A/C	CHL1	intron	0.991	1.01187	0.0108	0.2757		7
rs4003415	3:281306	T/C	CHL1	intron	0.991	0.98866	0.0108	0.2924		6
rs4003416	3:281319	A/G	CHL1	intron	0.993	0.99980	0.0106	0.9848		6
rs407738	3:276785	A/C	CHL1	intron	0.984	1.01157	0.0185	0.5343		7
rs4125616	3:294646	C/G	CHL1	intron	0.984	1.00874	0.0128	0.4973		7
rs41285105	3:431187	T/C	CHL1	intron	0.936	1.03221	0.0530	0.5497		7
rs41408847	3:353918	T/C	CHL1	intron	0.991	0.98620	0.0196	0.4777		6
rs419758	3:265349	T/G	CHL1	intron	0.981	1.01969	0.0183	0.2855		5
rs427620	3:296739	A/G	CHL1	intron	0.978	1.01025	0.0117	0.3836		7
rs432685	3:298171	T/C	CHL1	intron	0.994	0.99641	0.0109	0.7393		6
rs435917	3:286552	T/C	CHL1	intron	0.993	0.98946	0.0145	0.4646		6
rs447353	3:381016	T/C	CHL1	intron	0.952	1.01015	0.0163	0.5379		7
rs448325	3:379626	A/G	CHL1	intron	0.674	0.97365	0.0419	0.5235		6
rs448974	3:297265	A/C	CHL1	intron	0.997	1.01248	0.0145	0.3949		7
rs4541385	3:329970	C/G	CHL1	intron	1.000	0.99452	0.0109	0.615		7
rs455187	3:298355	T/C	CHL1	intron	0.993	1.00321	0.0109	0.7704		5
rs455239	3:299025	C/G	CHL1	intron	0.985	1.00501	0.0110	0.649		6
rs455357	3:287419	A/G	CHL1	intron	1.000	1.00431	0.0108	0.6876		7
rs455635	3:285316	A/C	CHL1	intron	0.999	1.00070	0.0106	0.9448		4
rs4582037	3:343414	T/G	CHL1	intron	0.964	0.98413	0.0112	0.1537		6
rs458258	3:281636	C/G	CHL1	intron	0.982	1.00733	0.0166	0.66		7
rs458831	3:264908	T/C	CHL1	intron	0.986	0.98118	0.0183	0.3008		7
rs459980	3:285569	A/G	CHL1	intron	0.995	0.99661	0.0106	0.7507		7
rs461010	3:298458	A/G	CHL1	intron	0.989	0.99035	0.0172	0.5747		5
rs461158	3:303418	A/T	CHL1	intron	0.981	1.00793	0.0135	0.5583		6
rs462570	3:274982	A/G	CHL1	intron	0.989	1.01654	0.0342	0.6313		5
rs463026	3:259785	T/C	CHL1	intron	0.839	1.01918	0.0178	0.2859		3a
rs463381	3:274649	A/G	CHL1	intron	0.991	1.01308	0.0184	0.4791		7
rs465541	3:318886	A/T	CHL1	intron	0.973	1.00351	0.0192	0.8569		6
rs465963	3:283176	C/G	CHL1	intron	0.983	0.98946	0.0184	0.5657		6
rs466782	3:275716	C/G	CHL1	intron	0.989	0.99124	0.0340	0.7965		6
rs466892	3:262208	A/T	CHL1	intron	0.855	0.97463	0.0127	0.04328		6
rs4684304	3:239120	A/G	CHL1	intron,near-gene-5	0.952	0.93323	0.0278	0.01285		2b
rs4684328	3:275101	T/C	CHL1	intron	0.992	0.98551	0.0108	0.1773		5
rs4684331	3:278366	C/G	CHL1	intron	0.995	1.01684	0.0114	0.1425		7
rs4684332	3:278420	A/G	CHL1	intron	0.995	0.98955	0.0108	0.3305		7
rs4684333	3:278661	A/C	CHL1	intron	0.995	0.98926	0.0108	0.3158		5
rs4684334	3:278697	A/C	CHL1	intron	0.994	0.98936	0.0108	0.3221		5
rs4684335	3:283415	T/C	CHL1	intron	0.990	0.98955	0.0109	0.3349		7
rs4684336	3:283808	T/C	CHL1	intron	0.943	0.98936	0.0111	0.3327		6
rs4684347	3:307663	A/G	CHL1	intron	0.994	1.03066	0.0196	0.1243		7
rs4684348	3:307802	T/C	CHL1	intron	0.994	1.03076	0.0196	0.1232		7
rs4684404	3:437533	T/C	CHL1	intron	0.896	0.96329	0.0294	0.2023		7
rs4685394	3:239347	C/G	CHL1	intron,near-gene-5,ncRNA	0.902	1.01359	0.0193	0.4852		5
rs4685447	3:252068	A/C	CHL1	intron	0.992	0.99511	0.0198	0.8041		7
rs4685448	3:252344	A/G	CHL1	intron	0.996	1.00572	0.0106	0.5944		7
rs4685474	3:267752	C/G	CHL1	intron	0.928	1.00310	0.0116	0.7914		7
rs4685475	3:267947	T/C	CHL1	intron	0.975	1.04310	0.0219	0.05343		7
rs4685476	3:268039	A/T	CHL1	intron	0.939	0.95352	0.0229	0.03785		6
rs4685477	3:268209	T/C	CHL1	intron	0.885	1.01725	0.0112	0.1275		7
rs4685488	3:282970	C/G	CHL1	intron	0.991	1.01045	0.0108	0.3371		7
rs4685489	3:283807	T/G	CHL1	intron	0.932	0.99015	0.0111	0.3706		6
rs4685490	3:283854	A/G	CHL1	intron	0.989	0.99005	0.0109	0.3574		7
rs4685521	3:313101	A/G	CHL1	intron	0.995	0.97814	0.0188	0.24		7
rs4685522	3:313194	T/C	CHL1	intron	0.990	1.02224	0.0188	0.2433		6
rs4685523	3:313459	T/C	CHL1	intron	0.996	0.97687	0.0189	0.2158		6
rs4685524	3:315315	A/G	CHL1	intron	0.994	1.02994	0.0191	0.121		7
rs4685525	3:315368	C/G	CHL1	intron	0.851	1.01359	0.0163	0.4076		7
rs4685557	3:345961	C/G	CHL1	intron	0.970	0.98778	0.0113	0.273		6
rs4685561	3:348560	A/C	CHL1	intron	0.953	1.01207	0.0124	0.3304		7
rs4685578	3:359454	T/C	CHL1	intron,near-gene-5	0.977	0.99930	0.0162	0.965		7
rs4685579	3:359574	A/T	CHL1	intron,near-gene-5	0.975	1.00080	0.0164	0.9592		6
rs4685586	3:364787	A/C	CHL1	intron	0.947	0.99760	0.0164	0.8815		7
rs4685588	3:365100	T/C	CHL1	intron	0.970	1.00310	0.0164	0.849		7
rs4685598	3:373693	A/C	CHL1	intron	1.000	1.00381	0.0135	0.7805		5
rs4685599	3:377114	T/C	CHL1	intron	0.997	0.99611	0.0190	0.8375		5
rs4685627	3:404334	A/G	CHL1	intron	0.978	0.99960	0.0108	0.9697		7
rs4685668	3:430682	T/C	CHL1	intron	0.964	1.03334	0.0296	0.2677		5
rs4685670	3:431363	T/C	CHL1	intron	0.953	1.03097	0.0300	0.3087		7
rs5024851	3:247473	T/G	CHL1	intron	0.986	1.00300	0.0165	0.8542		7
rs5030974	3:449217	T/C	CHL1	untranslated-3	0.908	0.94337	0.0394	0.1392		7
rs517086	3:296782	A/G	CHL1	intron	0.996	1.01217	0.0145	0.4043		6
rs58003001	3:277410	A/G	CHL1	intron	0.996	0.98432	0.0142	0.2663		6
rs590464	3:322558	A/G	CHL1	intron	0.927	0.99183	0.0117	0.4833		5
rs59625306	3:356953	A/G	CHL1	intron	0.969	1.00361	0.0165	0.829		5
rs59747046	3:305282	T/C	CHL1	intron	0.988	1.02953	0.0194	0.1334		5
rs59918618	3:242940	A/G	CHL1	intron	0.979	1.00511	0.0209	0.8074		7
rs62227202	3:317798	A/G	CHL1	intron	0.974	0.99551	0.0120	0.7078		6
rs62227204	3:324056	A/G	CHL1	intron	0.997	1.00884	0.0122	0.4726		7
rs62227205	3:324356	A/G	CHL1	intron	0.907	0.99581	0.0529	0.9363		5
rs62227208	3:349234	A/C	CHL1	intron	0.931	0.96667	0.0299	0.2561		5
rs62227231	3:362293	T/C	CHL1	intron	0.975	1.00090	0.0164	0.9552		6
rs62227232	3:362955	T/C	CHL1	intron	0.973	1.00130	0.0164	0.9361		7
rs62227233	3:362995	T/C	CHL1	intron	0.974	1.00100	0.0163	0.9518		7
rs62227235	3:364691	A/G	CHL1	intron	0.970	1.00270	0.0164	0.8666		7
rs62227238	3:368139	A/G	CHL1	intron	0.960	0.97971	0.0218	0.3489		6
rs62227239	3:370051	T/C	CHL1	intron	0.956	1.00050	0.0167	0.978		7
rs62227240	3:373547	T/C	CHL1	intron	0.991	0.99820	0.0188	0.9227		6
rs62227255	3:379808	A/G	CHL1	intron	0.760	0.97824	0.0296	0.4573		5
rs62227256	3:382329	C/G	CHL1	intron	0.922	1.01066	0.0201	0.599		5
rs62227257	3:383169	A/G	CHL1	intron	0.846	0.99980	0.0371	0.995		7
rs62227277	3:443399	T/C	CHL1	intron	0.695	1.00894	0.0598	0.8818		6
rs62227278	3:444024	A/G	CHL1	intron	0.742	1.02942	0.0235	0.2169		7
rs62228272	3:246913	T/C	CHL1	intron	0.790	0.98010	0.0408	0.6224		6
rs62228288	3:264420	A/G	CHL1	intron	0.982	0.94601	0.0223	0.01263		6
rs62228289	3:267463	T/C	CHL1	intron	0.973	0.95190	0.0230	0.03173		7
rs62228290	3:267624	A/G	CHL1	intron	0.779	0.99950	0.0135	0.9701		6
rs62228294	3:277407	A/T	CHL1	intron	0.997	1.01765	0.0142	0.2199		6
rs62228321	3:279372	A/C	CHL1	intron	0.994	0.98876	0.0108	0.2954		6
rs62228325	3:283473	C/G	CHL1	intron	0.990	1.04540	0.0219	0.04285		6
rs62228326	3:292299	C/G	CHL1	intron	0.983	1.00120	0.0130	0.926		6
rs62228337	3:299374	A/G	CHL1	intron	0.984	0.96281	0.0220	0.08536		7
rs62228338	3:299390	T/G	CHL1	intron	0.984	1.03863	0.0220	0.08554		7
rs62228339	3:302815	T/C	CHL1	intron	0.988	0.95161	0.0272	0.06786		5
rs62228342	3:305329	A/G	CHL1	intron	0.991	0.97434	0.0189	0.1682		5
rs62228343	3:306590	T/C	CHL1	intron	0.994	1.03076	0.0196	0.1229		2b
rs62228344	3:310471	T/C	CHL1	intron	0.996	0.98778	0.0134	0.3606		7
rs624266	3:282504	C/G	CHL1	intron	0.951	1.01745	0.0345	0.616		7
rs625589	3:288775	A/T	CHL1	intron,ncRNA	0.963	0.99810	0.0107	0.8592		7
rs634896	3:269208	A/G	CHL1	intron	0.990	0.98482	0.0184	0.4041		7
rs636092	3:261902	A/G	CHL1	intron	0.842	0.98098	0.0232	0.4076		6
rs6442646	3:239090	T/C	CHL1	intron,near-gene-5	0.940	1.03531	0.0187	0.06313		4
rs6442651	3:239245	C/G	CHL1	intron,near-gene-5	0.915	1.00000	0.0141	0.9993		5
rs6442794	3:404230	A/G	CHL1	intron	0.974	0.99900	0.0108	0.9251		7
rs6442824	3:436042	T/C	CHL1	intron	0.905	0.96464	0.0440	0.4128		6
rs6442833	3:451407	A/G	CHL1	near-gene-3	0.913	0.95180	0.0414	0.2328		7
rs644934	3:331723	A/T	CHL1	intron	0.978	1.00200	0.0194	0.9194		4
rs657505	3:345354	A/T	CHL1	intron	0.941	1.03221	0.0190	0.09511		7
rs668897	3:267293	A/G	CHL1	intron	0.967	0.98708	0.0175	0.4572		7
rs67072823	3:245715	T/C	CHL1	intron	0.984	1.00411	0.0166	0.804		6
rs67234475	3:302950	T/C	CHL1	intron	0.986	1.05317	0.0269	0.05431		6
rs6764363	3:312349	T/C	CHL1	intron	0.996	0.98383	0.0112	0.1452		7
rs6765116	3:247346	A/G	CHL1	intron	0.981	1.00170	0.0110	0.8755		6
rs6765752	3:368460	A/T	CHL1	intron	0.968	0.99591	0.0164	0.8038		6
rs6766301	3:278077	T/C	CHL1	intron	0.992	1.01765	0.0142	0.2203		6
rs6768464	3:368223	T/G	CHL1	intron	0.968	0.99591	0.0164	0.8026		7
rs6769011	3:240537	T/C	CHL1	intron	0.974	1.01420	0.0193	0.4654		5
rs6769747	3:244949	A/G	CHL1	intron	0.982	0.98334	0.0194	0.3869		7
rs6771924	3:249317	A/G	CHL1	intron	0.996	1.00411	0.0106	0.7014		5
rs6773584	3:240310	A/G	CHL1	intron	0.974	0.98590	0.0193	0.4602		5
rs6790586	3:250912	A/G	CHL1	intron	0.996	0.99432	0.0108	0.5999		6
rs6795631	3:312177	A/G	CHL1	intron	0.995	1.00884	0.0121	0.4689		3a
rs6798289	3:375243	T/C	CHL1	intron	0.994	1.00381	0.0133	0.7751		7
rs67985544	3:257134	T/C	CHL1	intron	0.988	1.01562	0.0192	0.4197		6
rs6798616	3:435713	C/G	CHL1	intron	0.929	0.96214	0.0397	0.3313		5
rs6798880	3:298819	A/C	CHL1	intron	0.992	1.00582	0.0109	0.5972		7
rs680021	3:266591	T/G	CHL1	intron	0.979	1.02061	0.0114	0.07278		7
rs6800364	3:374869	A/G	CHL1	intron	1.000	0.99710	0.0134	0.8281		6
rs6806211	3:311214	A/C	CHL1	intron	0.828	0.99710	0.0518	0.9557		6
rs6806357	3:435875	A/T	CHL1	intron	0.928	1.03790	0.0399	0.3508		6
rs6807794	3:446221	T/G	CHL1	intron	0.914	1.04687	0.0331	0.166		6
rs68109242	3:260156	T/C	CHL1	intron	0.981	0.99551	0.0167	0.7852		6
rs71306194	3:284008	A/G	CHL1	intron	0.710	0.99651	0.0137	0.7978		7
rs71306195	3:284024	A/C	CHL1	intron	0.780	0.98718	0.0120	0.2788		6
rs71611518	3:355981	A/T	CHL1	intron	0.910	1.00411	0.0161	0.7985		7
rs72619595	3:239921	A/C	CHL1	intron	0.905	0.99422	0.0113	0.6104		5
rs73005672	3:294484	T/G	CHL1	intron	0.989	0.99045	0.0183	0.5985		6
rs73005684	3:295691	A/G	CHL1	intron	0.994	0.98847	0.0146	0.4238		7
rs73007348	3:245133	A/T	CHL1	intron	0.983	1.01654	0.0194	0.3986		7
rs73007357	3:247487	A/G	CHL1	intron	0.984	1.01654	0.0195	0.3997		7
rs73007538	3:318667	T/G	CHL1	intron	0.901	0.99621	0.0136	0.7812		6
rs73007545	3:326837	T/C	CHL1	intron	0.942	0.97941	0.0509	0.6832		5
rs73007553	3:335142	A/C	CHL1	intron	0.926	0.97015	0.0504	0.5475		7
rs73007571	3:341563	T/C	CHL1	intron	0.857	0.99173	0.0224	0.7104		5
rs73007585	3:351704	T/C	CHL1	intron	0.975	1.00622	0.0479	0.897		7
rs73007590	3:355947	A/T	CHL1	intron	0.851	0.97590	0.0263	0.3524		6
rs73009504	3:360509	T/G	CHL1	intron,near-gene-5	0.992	0.98679	0.0184	0.4712		7
rs73009509	3:362372	T/C	CHL1	intron	0.994	0.98926	0.0185	0.5601		6
rs73009511	3:362462	A/G	CHL1	intron	0.993	0.98936	0.0185	0.5614		6
rs73009521	3:363625	A/G	CHL1	intron	0.992	0.98906	0.0184	0.5519		7
rs73009523	3:363691	T/C	CHL1	intron	0.970	1.00612	0.0513	0.9054		6
rs73009525	3:363887	T/C	CHL1	intron	0.994	1.01116	0.0182	0.5428		6
rs73009535	3:367094	A/T	CHL1	intron	0.857	0.99750	0.0169	0.8806		6
rs73009546	3:372569	A/G	CHL1	intron	0.883	1.00020	0.0112	0.9839		7
rs73011356	3:385437	A/G	CHL1	intron	0.906	1.02214	0.0427	0.6087		7
rs73015003	3:428111	T/C	CHL1	intron,near-gene-5	0.803	0.98324	0.0153	0.2694		7
rs73016741	3:251097	C/G	CHL1	intron	0.987	0.98364	0.0194	0.3951		6
rs73018666	3:274673	T/G	CHL1	intron	0.983	1.01471	0.0195	0.4531		6
rs73018673	3:276415	A/G	CHL1	intron	0.984	0.98738	0.0193	0.5114		6
rs73018685	3:278278	A/G	CHL1	intron	0.986	0.98649	0.0195	0.4853		6
rs73018690	3:278431	C/G	CHL1	intron	0.986	0.98649	0.0195	0.4858		7
rs73018693	3:278824	A/G	CHL1	intron	0.986	1.01369	0.0195	0.4851		5
rs73020808	3:279754	A/T	CHL1	intron	0.985	1.01248	0.0193	0.5195		7
rs73020846	3:283828	A/C	CHL1	intron	0.919	1.01521	0.0477	0.7521		6
rs73105097	3:449540	A/G	CHL1	untranslated-3	0.915	1.07004	0.0385	0.07863		7
rs7372245	3:378904	T/G	CHL1	intron	0.761	1.00833	0.0125	0.5074		7
rs73814165	3:243065	A/G	CHL1	intron	0.980	1.00723	0.0212	0.7349		6
rs73814772	3:446987	A/G	CHL1	intron	0.894	1.02521	0.0332	0.4527		6
rs74409738	3:280832	T/C	CHL1	intron	0.984	1.01440	0.0195	0.4636		7
rs74601790	3:293797	T/C	CHL1	intron	0.979	1.00944	0.0221	0.6716		7
rs74602207	3:439537	T/G	CHL1	intron	0.924	1.04185	0.0404	0.3096		6
rs74683073	3:259857	A/G	CHL1	intron	0.978	0.99631	0.0207	0.8569		3a
rs74890113	3:329009	A/G	CHL1	intron	0.997	1.00411	0.0204	0.8411		7
rs74996490	3:434466	T/G	CHL1	intron	0.931	1.03811	0.0399	0.3483		7
rs75000016	3:397066	T/C	CHL1	intron	0.902	0.98265	0.0471	0.7111		6
rs75003228	3:263188	A/T	CHL1	intron	0.958	1.00371	0.0210	0.8606		6
rs75092432	3:293438	A/G	CHL1	intron	0.978	0.99243	0.0222	0.7327		7
rs75118310	3:283582	A/G	CHL1	intron	0.968	0.99124	0.0354	0.8036		7
rs75434206	3:450981	A/G	CHL1	untranslated-3	0.902	1.04707	0.0413	0.265		5
rs75714787	3:280825	A/G	CHL1	intron	0.974	1.01359	0.0198	0.4948		7
rs75715218	3:350134	T/C	CHL1	intron	0.958	1.01796	0.0197	0.3658		5
rs75740142	3:361660	T/C	CHL1	intron	0.811	0.98955	0.0213	0.6205		6
rs75769213	3:252951	C/G	CHL1	intron	0.991	0.99501	0.0206	0.8072		7
rs75830832	3:284514	C/G	CHL1	intron	0.620	0.98334	0.0399	0.6738		5
rs76034246	3:265005	A/G	CHL1	intron	0.661	0.96841	0.0490	0.5126		6
rs76138295	3:433974	T/C	CHL1	intron	0.932	1.03769	0.0398	0.3529		7
rs76217823	3:319132	A/C	CHL1	intron	0.866	0.93735	0.0577	0.2628		5
rs76300119	3:431725	T/C	CHL1	intron	0.766	0.98147	0.0292	0.5209		7
rs76310080	3:355971	C/G	CHL1	intron	0.982	1.01349	0.0196	0.494		7
rs7634033	3:272216	T/C	CHL1	intron	0.992	1.00511	0.0107	0.6342		6
rs7646675	3:276273	T/C	CHL1	intron	0.994	1.00321	0.0106	0.7624		7
rs76645186	3:310555	T/G	CHL1	intron	0.984	0.99402	0.0200	0.7622		7
rs76660477	3:287876	A/T	CHL1	intron	0.973	1.00723	0.0222	0.7457		6
rs76702559	3:285113	T/C	CHL1	intron	0.701	1.00240	0.0319	0.9406		3a
rs76703198	3:321249	A/G	CHL1	intron	0.910	0.99432	0.0202	0.7761		5
rs76851756	3:293698	T/C	CHL1	intron	0.974	1.00783	0.0221	0.7242		6
rs77030744	3:335128	T/G	CHL1	intron	0.998	0.99651	0.0198	0.8593		7
rs77051213	3:357719	A/G	CHL1	intron	0.989	0.98827	0.0196	0.5476		7
rs77219101	3:358400	A/T	CHL1	intron	0.738	1.01735	0.0386	0.6568		6
rs77286176	3:301377	T/C	CHL1	intron	0.794	0.97317	0.0255	0.2862		7
rs77326044	3:351932	A/G	CHL1	intron	0.967	0.97951	0.0197	0.2931		7
rs77454957	3:282990	A/G	CHL1	intron	0.680	0.94724	0.0400	0.1752		7
rs77457393	3:351962	A/T	CHL1	intron	0.951	0.98699	0.0235	0.5764		6
rs77491449	3:292239	A/T	CHL1	intron	0.671	1.01258	0.0253	0.6219		6
rs77749553	3:289077	A/C	CHL1	intron,ncRNA	0.970	0.99322	0.0249	0.7831		6
rs77851964	3:364915	T/C	CHL1	intron	0.878	0.99154	0.0321	0.7909		7
rs77961431	3:304419	C/G	CHL1	intron	0.988	1.00572	0.0253	0.8221		7
rs78303127	3:285296	A/G	CHL1	intron	0.694	0.99860	0.0316	0.9644		4
rs78433311	3:348269	A/G	CHL1	intron	0.773	1.01106	0.0292	0.7054		7
rs78553470	3:449023	A/G	CHL1	untranslated-3	0.668	1.07972	0.0652	0.2393		6
rs78599746	3:262532	A/C	CHL1	intron	0.971	0.99750	0.0210	0.9049		7
rs78651228	3:264905	A/C	CHL1	intron	0.680	0.99104	0.0358	0.8009		7
rs78727710	3:326663	T/C	CHL1	intron	0.980	1.00914	0.0271	0.7356		7
rs78766407	3:289575	A/C	CHL1	intron,ncRNA	0.742	0.98010	0.0498	0.6868		6
rs79206070	3:447931	A/C	CHL1	untranslated-3	0.806	1.03200	0.0558	0.5722		6
rs79375727	3:362353	T/C	CHL1	intron	0.816	1.00955	0.0207	0.647		7
rs79673462	3:442930	A/C	CHL1	intron	0.841	0.94933	0.0396	0.1892		6
rs79687523	3:292824	A/T	CHL1	intron	0.971	0.99591	0.0394	0.9176		7
rs79774183	3:306895	A/C	CHL1	intron	0.609	0.97893	0.0428	0.619		7
rs79827175	3:345593	A/G	CHL1	intron	0.979	0.97395	0.0182	0.1479		7
rs80115455	3:293669	T/C	CHL1	intron	0.975	0.99025	0.0221	0.6564		6
rs80127630	3:282759	A/T	CHL1	intron	0.977	1.00280	0.0486	0.954		7
rs80226050	3:390916	A/G	CHL1	intron	0.918	1.01045	0.0272	0.7025		6
rs80284404	3:274403	A/G	CHL1	intron	0.967	1.01725	0.0369	0.6424		7
rs87018	3:338277	A/G	CHL1	intron	0.990	1.00120	0.0107	0.9069		7
rs892296	3:397731	A/G	CHL1	intron	0.972	1.00562	0.0108	0.6038		5
rs9310783	3:317145	A/G	CHL1	intron	0.997	1.01654	0.0171	0.3375		7
rs9310786	3:319630	A/G	CHL1	intron	0.984	0.99980	0.0192	0.9918		4
rs9310805	3:324484	T/C	CHL1	intron	1.010	0.99541	0.0196	0.8149		5
rs9311030	3:398222	T/C	CHL1	intron	0.901	1.00733	0.0409	0.8585		5
rs931678	3:259457	C/G	CHL1	intron	0.989	0.98138	0.0195	0.3332		5
rs931679	3:259525	A/T	CHL1	intron	0.988	1.01959	0.0195	0.3178		5
rs9637430	3:387597	T/C	CHL1	intron	0.948	1.01076	0.0117	0.358		6
rs9637438	3:347298	A/G	CHL1	intron	0.971	0.97902	0.0196	0.2783		7
rs9809528	3:250758	A/G	CHL1	intron	0.998	0.99581	0.0106	0.6893		7
rs9810056	3:387030	T/C	CHL1	intron	0.927	1.01339	0.0119	0.2605		6
rs9810833	3:450751	A/T	CHL1	untranslated-3	0.911	1.07476	0.0386	0.06217		6
rs9813769	3:286023	A/G	CHL1	intron	0.989	1.00833	0.0116	0.4739		5
rs9814099	3:286206	A/G	CHL1	intron	0.991	1.00854	0.0115	0.4636		7
rs9817620	3:261440	T/C	CHL1	intron	0.911	0.99581	0.0220	0.8468		7
rs9818160	3:292449	A/T	CHL1	intron	0.969	1.01035	0.0236	0.6608		6
rs9819022	3:317100	A/T	CHL1	intron	0.996	0.98157	0.0171	0.2767		5
rs9819335	3:287275	A/G	CHL1	intron	0.994	1.02511	0.0356	0.4868		5
rs9820546	3:449246	A/C	CHL1	untranslated-3	0.930	1.06844	0.0395	0.09391		7
rs9822029	3:387021	T/C	CHL1	intron	0.926	0.98728	0.0119	0.2811		6
rs9822834	3:289380	A/C	CHL1	intron,ncRNA	0.990	0.97541	0.0357	0.4863		6
rs9823348	3:400357	C/G	CHL1	intron	0.941	1.00331	0.0113	0.7724		7
rs9824311	3:403288	A/G	CHL1	intron	0.976	1.00180	0.0108	0.8708		6
rs9824442	3:403308	A/G	CHL1	intron	0.976	1.00190	0.0108	0.8635		7
rs9824712	3:318299	A/G	CHL1	intron	0.756	1.00562	0.0190	0.7694		7
rs9826487	3:428790	A/G	CHL1	intron,near-gene-5	0.806	1.00562	0.0132	0.6729		7
rs9826613	3:428839	A/G	CHL1	intron,near-gene-5	0.908	0.94942	0.0418	0.2144		6
rs9826896	3:398919	A/G	CHL1	intron	0.977	1.00642	0.0108	0.5545		5
rs9828729	3:371335	T/C	CHL1	intron	0.962	0.99521	0.0191	0.8003		5
rs9830226	3:318812	T/C	CHL1	intron	0.982	0.99601	0.0192	0.8365		7
rs9836576	3:431862	A/T	CHL1	intron	0.938	1.04592	0.0394	0.2552		5
rs9839027	3:403297	A/C	CHL1	intron	0.976	1.00190	0.0108	0.8632		6
rs9840250	3:428122	C/G	CHL1	intron,near-gene-5	0.822	1.01623	0.0117	0.1681		6
rs9841455	3:303629	T/C	CHL1	intron	0.974	1.02143	0.0173	0.2224		7
rs9841789	3:398934	T/C	CHL1	intron	0.976	1.00622	0.0108	0.5623		5
rs9843977	3:367898	A/T	CHL1	intron	0.959	1.01511	0.0216	0.4884		6
rs9844685	3:442769	C/G	CHL1	intron	0.882	0.96002	0.0307	0.1836		6
rs9847822	3:428129	A/C	CHL1	intron,near-gene-5	0.914	0.98797	0.0491	0.8046		7
rs9849813	3:268134	A/T	CHL1	intron	0.952	1.02655	0.0121	0.0307		6
rs9852116	3:378926	T/G	CHL1	intron	0.709	1.02245	0.0235	0.3447		7
rs9852287	3:283992	C/G	CHL1	intron	0.883	1.00060	0.0151	0.9698		7
rs9856168	3:284072	T/G	CHL1	intron	0.770	1.02357	0.0149	0.1177		7
rs9858162	3:375758	A/G	CHL1	intron	0.973	1.00080	0.0155	0.9575		7
rs9859657	3:299165	T/C	CHL1	intron	0.943	1.02542	0.0355	0.4794		6
rs9861231	3:377645	C/G	CHL1	intron	0.989	0.99461	0.0134	0.6882		6
rs9863056	3:376457	A/T	CHL1	intron	0.970	0.99960	0.0154	0.98		7
rs9865220	3:446341	A/G	CHL1	intron	0.905	0.95964	0.0321	0.1988		7
rs9865865	3:446707	A/G	CHL1	intron	0.848	1.00371	0.0536	0.9455		7
rs9867115	3:243088	C/G	CHL1	intron	0.980	0.99213	0.0212	0.7105		5
rs9870975	3:284061	T/C	CHL1	intron	0.779	0.99561	0.0122	0.7206		7
rs9871112	3:284106	A/C	CHL1	intron	0.720	1.01582	0.0157	0.317		7
rs9871714	3:379533	T/C	CHL1	intron	0.748	1.02020	0.0242	0.4082		7
rs9873092	3:317753	T/G	CHL1	intron	0.962	0.96754	0.0191	0.08433		6
rs9873156	3:377556	T/C	CHL1	intron	0.997	0.99621	0.0190	0.8427		7
rs9873627	3:377848	T/G	CHL1	intron	0.992	0.99263	0.0133	0.5788		6
rs9878435	3:284082	A/G	CHL1	intron	0.896	0.96242	0.0193	0.0478		7
rs9881279	3:291785	C/G	CHL1	intron	0.947	1.00020	0.0117	0.9894		3a
rs9882433	3:349017	A/G	CHL1	intron	0.963	0.98728	0.0185	0.4896		5
rs9882918	3:445779	A/G	CHL1	intron	0.914	1.05012	0.0329	0.1372		7
rs9883157	3:284045	T/C	CHL1	intron	0.656	1.01116	0.0147	0.4486		6
rs9883983	3:345353	A/T	CHL1	intron	0.941	1.03221	0.0191	0.09601		7
rs9990005	3:326537	A/G	CHL1	intron	0.999	1.00642	0.0204	0.7537		7
rs9990181	3:326484	T/C	CHL1	intron	0.998	1.00421	0.0107	0.6971		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information