CHGA

Basic Information
Gene SymbolCHGA
Entrez Id1113
Positionchr14:93389445..93401638
Descriptionchromogranin A
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs11157406014:93402915T/GCHGAnear-gene-30.7061.072290.04850.15067
rs11715918814:93402836T/CCHGAnear-gene-30.8710.952560.03630.18085
rs1185185914:93398144A/GCHGAintron0.9491.013290.01310.31335
rs1287866114:93400554A/GCHGAintron0.9470.988960.01230.3695
rs1287882314:93400616A/GCHGAintron0.9531.006120.01130.59245
rs14381398714:93394175A/GCHGAintron0.9100.979220.02770.4484-
rs14493806414:93395465A/GCHGAintron0.8571.048650.04390.2797-
rs18539704514:93389965T/CCHGAintron0.8851.058020.03330.09047-
rs223613214:93398670T/CCHGAintron0.8911.013590.02100.51855
rs229539514:93395407A/GCHGAintron0.9681.008640.01200.47475
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
Showing 1 to 10 of 50 entries

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information