CENPE

Basic Information

Gene Symbol	CENPE
Entrez Id	1062
Position	chr4:104026963..104119566
Description	centromere protein E
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1031803	4:104063472	A/C	CENPE	intron	0.760	0.95028	0.0355	0.1512		6
rs1031804	4:104066049	T/C	CENPE	intron	1.000	1.02265	0.0108	0.03787		6
rs111517422	4:104064007	A/T	CENPE	intron	0.968	0.99054	0.0221	0.6692		6
rs113314017	4:104041961	T/C	CENPE	intron	0.841	1.04812	0.0391	0.23		6
rs114087689	4:104064037	T/C	CENPE	intron	0.816	1.07347	0.0582	0.2228		7
rs114265890	4:104042683	A/G	CENPE	intron	0.850	0.96165	0.0334	0.2418		6
rs115725721	4:104062741	T/C	CENPE	intron	0.840	0.95028	0.0441	0.2475		7
rs116118593	4:104042798	T/C	CENPE	intron	0.766	1.02122	0.0399	0.5988		7
rs116461722	4:104096206	A/G	CENPE	intron	0.767	1.02051	0.0399	0.6113		7
rs116652741	4:104064036	T/G	CENPE	intron	0.816	1.07347	0.0582	0.2228		7
rs116708592	4:104104165	T/C	CENPE	intron	0.767	0.97990	0.0399	0.61		7
rs11724309	4:104098605	A/G	CENPE	intron	0.997	0.99980	0.0139	0.9875		7
rs11724522	4:104033129	A/G	CENPE	intron	0.997	1.00040	0.0139	0.9745		6
rs11725048	4:104081708	A/G	CENPE	intron	0.997	0.99950	0.0139	0.97		6
rs11727498	4:104100987	T/C	CENPE	intron	1.000	1.02368	0.0108	0.03019		5
rs11729856	4:104078732	A/G	CENPE	intron	0.997	1.00170	0.0139	0.9047		7
rs11730764	4:104045810	T/C	CENPE	intron	0.997	0.99930	0.0139	0.9594		5
rs11733939	4:104112874	T/C	CENPE	intron	0.799	0.97677	0.0163	0.1481		7
rs12501621	4:104095505	T/G	CENPE	intron	1.000	0.97726	0.0108	0.03316		7
rs12504143	4:104101723	A/G	CENPE	intron	0.997	1.00070	0.0139	0.9594		7
rs12505012	4:104093052	T/C	CENPE	intron	0.999	0.96667	0.0129	0.008415		7
rs12505289	4:104042790	T/C	CENPE	intron	0.997	1.00150	0.0139	0.9131		7
rs12505908	4:104048353	A/G	CENPE	intron	0.997	0.99980	0.0139	0.9862		6
rs12506065	4:104043011	A/C	CENPE	intron	0.997	1.00090	0.0139	0.95		7
rs12506198	4:104043257	A/G	CENPE	intron	0.997	0.99950	0.0139	0.972		7
rs12506575	4:104091605	A/C	CENPE	intron	1.000	0.96657	0.0129	0.008232		7
rs12507348	4:104044529	T/C	CENPE	intron	0.996	1.00010	0.0139	0.9933		5
rs12511516	4:104083867	A/G	CENPE	intron	0.998	0.99990	0.0139	0.9944		7
rs12512468	4:104077603	A/G	CENPE	intron	0.997	0.99930	0.0139	0.9595		6
rs13114629	4:104032368	A/G	CENPE	intron	0.868	1.07713	0.0329	0.02374		6
rs140110615	4:104092562	T/C	CENPE	intron	0.867	1.07853	0.0516	0.1427		-
rs140557496	4:104033770	T/C	CENPE	intron	0.670	0.95409	0.0635	0.4589		-
rs141660593	4:104112284	T/C	CENPE	intron	0.975	0.99980	0.0143	0.9869		-
rs142160405	4:104052362	A/C	CENPE	intron	0.834	1.03262	0.0583	0.5819		-
rs142437503	4:104114875	T/C	CENPE	intron	0.649	0.94337	0.0605	0.335		-
rs143028312	4:104108526	A/G	CENPE	intron	0.986	0.96358	0.0131	0.004564		-
rs143929137	4:104112168	T/G	CENPE	intron	0.996	1.00090	0.0139	0.9457		-
rs145776128	4:104074141	A/G	CENPE	intron	0.735	1.00351	0.0459	0.9386		-
rs146802304	4:104033524	A/G	CENPE	intron	0.717	1.07767	0.0663	0.2595		-
rs149725992	4:104056311	T/C	CENPE	intron	0.807	0.99511	0.0583	0.9336		-
rs150812513	4:104112285	T/G	CENPE	intron	0.944	1.03572	0.0136	0.009865		-
rs151113663	4:104111991	A/G	CENPE	intron	0.996	0.99920	0.0139	0.9553		-
rs17215862	4:104027644	A/G	CENPE	intron	0.998	1.00100	0.0139	0.9422		7
rs17216959	4:104075575	T/G	CENPE	intron	0.962	0.98946	0.0223	0.6343		6
rs17217250	4:104102563	T/C	CENPE	coding-synon	1.000	0.96657	0.0129	0.00824		6
rs17217347	4:104105573	T/C	CENPE	intron	0.847	0.99910	0.0402	0.9816		6
rs17217431	4:104113418	A/G	CENPE	intron	0.997	0.99960	0.0139	0.9784		7
rs17217473	4:104114742	A/C	CENPE	intron	0.999	0.97580	0.0108	0.02332		5
rs17282245	4:104046098	T/C	CENPE	intron	0.841	1.07069	0.0511	0.1815		4
rs17283027	4:104086578	A/G	CENPE	intron	0.997	0.99830	0.0139	0.9048		7
rs17283077	4:104096804	C/G	CENPE	intron	0.994	0.99870	0.0139	0.9257		6
rs17283194	4:104103198	T/C	CENPE	intron	0.997	0.99840	0.0139	0.9079		7
rs17283278	4:104107043	T/C	CENPE	intron	1.000	1.03500	0.0129	0.007584		7
rs181506525	4:104109751	T/C	CENPE	intron	0.911	0.96214	0.0143	0.007141		-
rs184445402	4:104060307	T/G	CENPE	intron	0.802	1.03448	0.0493	0.4913		-
rs185238151	4:104119326	A/G	CENPE	intron	0.855	1.03666	0.0486	0.4583		-
rs190185035	4:104034377	A/T	CENPE	intron	0.698	1.00220	0.0302	0.9427		-
rs190808322	4:104043475	A/G	CENPE	intron	0.647	0.94158	0.0606	0.3206		-
rs192155771	4:104111773	T/G	CENPE	intron	0.948	1.03697	0.0429	0.3983		-
rs192623712	4:104116984	T/C	CENPE	intron	0.802	1.03634	0.0492	0.4683		-
rs1967006	4:104034082	T/C	CENPE	intron	0.604	1.01015	0.0207	0.6241		6
rs2045746	4:104083578	T/G	CENPE	intron	1.000	1.02388	0.0108	0.02882		1f
rs2126470	4:104061762	T/C	CENPE	intron	1.000	0.97775	0.0108	0.03667		7
rs2169508	4:104066890	A/T	CENPE	intron	0.999	1.02214	0.0108	0.04197		6
rs2243682	4:104059542	A/G	CENPE	missense	1.000	1.03376	0.0129	0.00988		7
rs2251322	4:104079424	T/C	CENPE	intron	1.000	1.02306	0.0108	0.03438		7
rs2251634	4:104082349	T/C	CENPE	coding-synon	1.000	1.02306	0.0108	0.03421		5
rs2290943	4:104117191	A/G	CENPE	coding-synon	0.996	0.96561	0.0129	0.006634		7
rs2615538	4:104081371	T/C	CENPE	intron	1.000	1.03479	0.0129	0.007817		7
rs2615539	4:104081106	C/G	CENPE	intron	1.000	0.97736	0.0108	0.03394		7
rs2615541	4:104065180	A/G	CENPE	intron	1.000	1.03417	0.0129	0.008957		7
rs2615542	4:104066461	A/G	CENPE	missense	1.000	0.96686	0.0129	0.008864		6
rs2623060	4:104047504	A/G	CENPE	intron	0.997	1.02378	0.0108	0.02921		7
rs2623062	4:104057121	T/C	CENPE	intron	1.000	1.03407	0.0129	0.009155		7
rs2623063	4:104055722	A/G	CENPE	intron	0.977	1.03552	0.0131	0.007472		6
rs2623064	4:104030792	A/C	CENPE	intron	0.999	1.02327	0.0108	0.03314		7
rs2623069	4:104039659	A/G	CENPE	intron	1.000	1.03469	0.0129	0.008105		1f
rs2623070	4:104037388	A/G	CENPE	intron	0.997	1.02378	0.0108	0.02958		6
rs2623076	4:104033112	A/G	CENPE	intron	0.999	1.03552	0.0128	0.006535		6
rs2623082	4:104051132	T/C	CENPE	intron	1.000	0.96686	0.0129	0.008895		6
rs2623085	4:104041919	A/G	CENPE	intron	0.820	1.03076	0.0252	0.2296		6
rs2711888	4:104046990	A/C	CENPE	intron	0.999	1.03552	0.0128	0.006615		7
rs2711889	4:104039926	A/G	CENPE	intron	0.992	0.96715	0.0129	0.009757		7
rs2711890	4:104080964	A/G	CENPE	intron	0.763	1.05253	0.0355	0.1496		6
rs2711891	4:104077881	T/C	CENPE	intron	1.000	0.96667	0.0129	0.008499		6
rs2711893	4:104071106	A/T	CENPE	intron	1.000	1.03417	0.0129	0.009141		7
rs2711894	4:104068898	T/G	CENPE	intron	0.921	1.03490	0.0146	0.019		6
rs2711895	4:104067669	T/G	CENPE	intron	0.999	1.03376	0.0129	0.009906		7
rs2711896	4:104031440	T/G	CENPE	intron	1.000	0.96657	0.0129	0.008277		6
rs2711898	4:104063071	T/C	CENPE	intron	1.000	1.02316	0.0108	0.03355		6
rs2711899	4:104062414	T/C	CENPE	intron	0.999	0.97824	0.0108	0.04153		6
rs2711900	4:104058596	A/G	CENPE	intron	1.000	1.03407	0.0129	0.009171		5
rs2711901	4:104057887	T/G	CENPE	intron	1.000	0.96696	0.0129	0.00913		5
rs2720448	4:104030589	T/C	CENPE	intron	0.999	1.02337	0.0108	0.03222		7
rs2720449	4:104032264	A/G	CENPE	intron	1.000	1.03458	0.0129	0.008208		7
rs2720450	4:104034598	A/G	CENPE	intron	0.948	0.96822	0.0129	0.01211		6
rs2720451	4:104034985	C/G	CENPE	intron	0.998	1.03531	0.0128	0.006949		7
rs2720452	4:104036168	T/C	CENPE	intron	0.999	0.96590	0.0128	0.006977		7
rs2720453	4:104041293	T/C	CENPE	intron	0.999	0.96599	0.0128	0.007045		6
rs2720455	4:104050326	A/G	CENPE	intron	1.000	1.03407	0.0129	0.009244		7
rs2720456	4:104050510	A/G	CENPE	intron	1.000	1.03407	0.0129	0.009234		5
rs2720457	4:104050980	T/G	CENPE	intron	0.998	1.03490	0.0129	0.007626		7
rs2720458	4:104052963	C/G	CENPE	intron	1.000	0.97697	0.0108	0.03092		7
rs2720460	4:104054686	A/G	CENPE	intron	1.000	0.97707	0.0108	0.03186		6
rs2720461	4:104055748	A/G	CENPE	intron	0.991	0.97736	0.0109	0.0347		6
rs2720462	4:104056210	T/G	CENPE	intron	1.000	0.97668	0.0108	0.02898		7
rs2720463	4:104057248	A/G	CENPE	intron	1.000	1.03407	0.0129	0.009159		7
rs2720464	4:104073201	A/G	CENPE	intron	1.000	1.02357	0.0108	0.03101		7
rs2720467	4:104085018	T/C	CENPE	intron	0.998	0.96638	0.0129	0.007899		7
rs2720468	4:104085153	A/G	CENPE	intron	0.998	0.97736	0.0108	0.03436		7
rs2720469	4:104086484	T/C	CENPE	intron	1.000	1.02316	0.0108	0.03388		7
rs2720470	4:104086486	A/G	CENPE	intron	1.000	1.03458	0.0129	0.008235		7
rs28502124	4:104034026	T/C	CENPE	intron	0.635	1.03707	0.0222	0.1018		6
rs2866633	4:104060781	T/C	CENPE	intron	0.997	1.00130	0.0139	0.9234		7
rs2954141	4:104048270	A/C	CENPE	intron	0.872	1.03510	0.0142	0.01511		6
rs3816642	4:104115199	T/C	CENPE	intron	0.998	1.03552	0.0129	0.006741		7
rs3974474	4:104105717	T/C	CENPE	intron	0.996	0.99980	0.0139	0.9876		6
rs4698879	4:104103897	T/C	CENPE	intron	1.000	1.03479	0.0129	0.007935		7
rs4699050	4:104114297	A/G	CENPE	intron	0.999	0.97560	0.0108	0.02206		6
rs4699051	4:104114394	T/C	CENPE	intron	0.997	0.97560	0.0108	0.02224		7
rs58648171	4:104073498	T/C	CENPE	intron	0.998	0.99990	0.0139	0.9943		7
rs61355145	4:104032529	A/G	CENPE	intron	0.998	0.99860	0.0138	0.9189		6
rs62327333	4:104063381	A/T	CENPE	intron	0.830	0.97161	0.0253	0.2539		6
rs62327334	4:104069822	T/C	CENPE	intron	0.829	1.02973	0.0253	0.2465		6
rs66869812	4:104073117	T/C	CENPE	intron	0.998	1.00010	0.0139	0.9946		6
rs68023422	4:104087081	T/C	CENPE	intron	1.000	1.03448	0.0129	0.008505		7
rs6810571	4:104086787	T/G	CENPE	intron	1.000	1.02316	0.0108	0.03359		6
rs6813563	4:104099110	A/G	CENPE	intron	0.996	1.02183	0.0108	0.04604		7
rs6830082	4:104107974	A/T	CENPE	intron	0.999	1.03490	0.0129	0.007747		4
rs6830791	4:104059823	A/G	CENPE	intron	0.997	0.99990	0.0139	0.9949		7
rs6836162	4:104059994	T/C	CENPE	intron	0.997	1.00030	0.0139	0.9823		6
rs6837114	4:104118223	T/C	CENPE	intron	0.993	1.00040	0.0139	0.9781		7
rs6841136	4:104103509	A/C	CENPE	intron	1.000	0.97726	0.0108	0.0329		6
rs6847142	4:104107526	A/C	CENPE	intron	1.000	1.03541	0.0129	0.006853		6
rs6847357	4:104107655	C/G	CENPE	intron	1.000	0.96551	0.0129	0.006482		6
rs72665048	4:104029739	C/G	CENPE	intron	0.996	0.99970	0.0139	0.9823		7
rs72665049	4:104030790	C/G	CENPE	intron	0.996	1.00020	0.0139	0.9869		7
rs72665052	4:104037188	T/C	CENPE	intron	0.998	1.00080	0.0138	0.9511		5
rs72665054	4:104045302	T/C	CENPE	intron	0.994	1.00110	0.0139	0.9356		7
rs72665056	4:104049413	T/C	CENPE	intron	0.998	0.99960	0.0139	0.976		7
rs72665063	4:104064139	T/C	CENPE	intron	0.997	1.00040	0.0139	0.9791		7
rs72665071	4:104082838	A/G	CENPE	intron	0.997	1.00050	0.0139	0.9692		6
rs72665075	4:104086175	A/T	CENPE	intron	0.821	1.03015	0.0654	0.6499		7
rs72665080	4:104087497	A/G	CENPE	intron	0.970	1.00904	0.0221	0.6827		5
rs72665085	4:104092281	C/G	CENPE	intron	1.000	0.96647	0.0129	0.008117		5
rs72665089	4:104100756	A/G	CENPE	intron	1.000	0.96667	0.0129	0.00848		6
rs72665093	4:104105279	T/C	CENPE	intron	0.995	1.00010	0.0139	0.9958		6
rs72665095	4:104106574	A/C	CENPE	intron	0.962	0.99144	0.0224	0.7016		7
rs72665096	4:104106589	T/C	CENPE	intron	0.996	0.99990	0.0139	0.9947		6
rs74711319	4:104116637	A/C	CENPE	intron	0.921	1.05993	0.0436	0.1818		6
rs75077651	4:104059213	T/C	CENPE	intron	0.851	0.99471	0.0390	0.8918		7
rs75424137	4:104073800	A/T	CENPE	intron	0.841	0.95839	0.0386	0.2705		5
rs75607480	4:104105099	T/C	CENPE	intron	0.688	0.94526	0.0501	0.2608		6
rs75810911	4:104082095	T/C	CENPE	intron	0.800	1.03159	0.0613	0.6116		6
rs75974097	4:104065945	A/T	CENPE	intron	0.851	0.97258	0.0407	0.4941		7
rs77611518	4:104048418	A/G	CENPE	intron	0.748	0.97853	0.0347	0.5325		6
rs77626963	4:104029098	T/C	CENPE	intron	0.710	1.03666	0.0668	0.5903		6
rs77672316	4:104115111	T/G	CENPE	intron	0.877	1.00914	0.0228	0.6878		6
rs78336913	4:104111414	T/C	CENPE	intron	0.997	1.00010	0.0139	0.9946		7
rs78820409	4:104090735	A/G	CENPE	intron	0.952	0.98639	0.0256	0.5935		5
rs79088594	4:104068300	A/G	CENPE	intron	0.952	1.01481	0.0256	0.5662		7
rs79353162	4:104106020	A/G	CENPE	intron	0.845	0.95161	0.0443	0.2634		7
rs79943267	4:104037135	A/G	CENPE	intron	0.785	0.98295	0.0447	0.7005		7
rs80039447	4:104084179	T/C	CENPE	intron	0.748	0.97453	0.0461	0.5756		6
rs80269225	4:104068083	C/G	CENPE	intron	0.838	1.01684	0.0544	0.7594		7
rs80300150	4:104089378	A/G	CENPE	intron	0.841	0.99561	0.0379	0.9076		7
rs9761205	4:104033912	T/C	CENPE	intron	0.649	0.99521	0.0206	0.8142		6
rs9761219	4:104033996	T/C	CENPE	intron	0.826	0.95753	0.0143	0.002432		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information