CDC42SE2

Basic Information

Gene Symbol	CDC42SE2
Entrez Id	56990
Position	chr5:130599702..130730383
Description	CDC42 small effector 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10035521	5:130611183	T/C	CDC42SE2	intron	0.920	0.99442	0.0342	0.8695		6
rs10042016	5:130635566	A/G	CDC42SE2	intron	1.000	0.99730	0.0281	0.9227		7
rs10045867	5:130640460	A/G	CDC42SE2	intron	1.000	1.01613	0.0324	0.6224		5
rs10058174	5:130614602	T/C	CDC42SE2	intron	0.970	0.97531	0.0131	0.05537		7
rs10063968	5:130643612	T/C	CDC42SE2	intron	1.000	1.00230	0.0288	0.9376		5
rs10077467	5:130609630	A/C	CDC42SE2	intron	1.000	1.01664	0.0325	0.6106		5
rs10077715	5:130634110	T/C	CDC42SE2	intron	1.000	0.99980	0.0289	0.9953		7
rs1030271	5:130632655	C/G	CDC42SE2	intron	0.915	1.01755	0.0117	0.1354		7
rs10463514	5:130682786	C/G	CDC42SE2	intron	0.878	1.05570	0.0282	0.05455		7
rs10477730	5:130633230	A/G	CDC42SE2	intron	0.859	1.02327	0.0129	0.07409		7
rs10477731	5:130666535	A/C	CDC42SE2	intron	1.000	1.01593	0.0324	0.6256		7
rs10478979	5:130601200	C/G	CDC42SE2	intron	1.000	0.99940	0.0287	0.9832		2b
rs10478980	5:130618247	T/C	CDC42SE2	intron	0.996	0.97443	0.0127	0.0411		5
rs10478983	5:130727456	A/T	CDC42SE2	intron	1.000	1.00180	0.0288	0.95		6
rs1088581	5:130682622	C/G	CDC42SE2	intron	0.989	1.02460	0.0128	0.05857		7
rs112016727	5:130629408	A/G	CDC42SE2	intron	0.945	0.97775	0.0415	0.5887		7
rs112087595	5:130720083	A/G	CDC42SE2	intron	0.771	0.99005	0.0360	0.7808		4
rs112341930	5:130655526	T/C	CDC42SE2	intron	0.753	0.98718	0.0255	0.6126		7
rs112356757	5:130679760	T/G	CDC42SE2	intron	0.976	1.03603	0.0513	0.4894		6
rs112694676	5:130609526	A/G	CDC42SE2	intron	0.738	1.00160	0.0287	0.9546		5
rs113017841	5:130625226	T/C	CDC42SE2	intron	0.946	1.02419	0.0420	0.5682		6
rs113953385	5:130609082	A/C	CDC42SE2	intron	0.952	1.01167	0.0617	0.8507		7
rs114127486	5:130721635	T/C	CDC42SE2	intron	0.719	1.03386	0.0499	0.5052		6
rs114708038	5:130604048	C/G	CDC42SE2	intron	0.728	0.95256	0.0423	0.2507		7
rs115757118	5:130656800	A/T	CDC42SE2	intron	0.725	0.97190	0.0563	0.6124		5
rs116482337	5:130679713	A/G	CDC42SE2	intron	0.932	0.97015	0.0520	0.56		7
rs11745955	5:130605143	T/C	CDC42SE2	intron	1.010	0.97814	0.0120	0.0651		7
rs11951274	5:130695152	T/C	CDC42SE2	untranslated-5	1.000	1.00070	0.0287	0.9816		7
rs12109957	5:130632379	A/G	CDC42SE2	intron	1.000	0.99770	0.0281	0.9353		6
rs12109963	5:130632653	A/C	CDC42SE2	intron	1.010	0.99780	0.0281	0.9375		7
rs12513768	5:130616792	A/G	CDC42SE2	intron	1.010	0.97834	0.0120	0.06781		5
rs12515858	5:130619428	T/C	CDC42SE2	intron	1.010	0.97844	0.0120	0.069		6
rs12719444	5:130607378	T/C	CDC42SE2	intron	1.000	0.97550	0.0127	0.05083		7
rs13154452	5:130623358	A/G	CDC42SE2	intron	1.010	0.97834	0.0120	0.06813		7
rs13158215	5:130629543	A/C	CDC42SE2	intron	1.010	0.97814	0.0120	0.065		7
rs13158295	5:130629392	A/G	CDC42SE2	intron	1.010	0.97814	0.0120	0.06607		7
rs13173941	5:130623232	A/T	CDC42SE2	intron	1.010	0.97824	0.0120	0.06643		7
rs13174167	5:130676300	A/T	CDC42SE2	intron	0.624	1.02439	0.0356	0.4985		6
rs13175084	5:130655945	T/C	CDC42SE2	intron	0.983	0.98699	0.0108	0.2237		7
rs13179482	5:130626073	A/G	CDC42SE2	intron	1.010	0.97834	0.0120	0.06764		6
rs13185787	5:130627884	A/G	CDC42SE2	intron	0.987	1.02183	0.0120	0.07302		7
rs139299786	5:130681224	T/C	CDC42SE2	intron	0.887	1.03107	0.0428	0.4752		-
rs140084639	5:130677457	C/G	CDC42SE2	intron	0.664	1.07058	0.0451	0.1302		-
rs141172419	5:130675361	A/G	CDC42SE2	intron	0.646	0.93744	0.0439	0.1415		-
rs143735005	5:130694028	A/T	CDC42SE2	intron	0.609	0.97210	0.0678	0.6769		-
rs144520611	5:130621482	C/G	CDC42SE2	intron	0.963	1.00100	0.0529	0.9856		-
rs146338384	5:130689402	A/C	CDC42SE2	intron	0.678	1.05538	0.0481	0.2623		-
rs146968852	5:130673610	A/G	CDC42SE2	intron	0.846	1.01096	0.0294	0.7099		-
rs148415509	5:130642365	A/G	CDC42SE2	intron	0.962	0.99740	0.0529	0.9603		-
rs148592401	5:130614635	A/G	CDC42SE2	intron	0.889	1.01837	0.0403	0.6504		-
rs149156702	5:130697709	T/C	CDC42SE2	intron	0.824	1.02798	0.0511	0.5896		-
rs149672147	5:130683988	A/T	CDC42SE2	intron	0.952	1.00321	0.0334	0.9233		-
rs151240414	5:130672061	A/G	CDC42SE2	intron	0.938	1.05707	0.0330	0.09271		-
rs17515610	5:130706434	T/C	CDC42SE2	intron	0.828	1.01552	0.0199	0.4394		7
rs181279873	5:130609327	C/G	CDC42SE2	intron	0.648	1.03904	0.0611	0.5304		-
rs182495479	5:130614543	T/G	CDC42SE2	intron	0.606	0.98748	0.0493	0.7975		-
rs184189412	5:130717570	T/C	CDC42SE2	intron	0.950	1.03365	0.0529	0.531		-
rs184405238	5:130668788	T/C	CDC42SE2	intron	0.692	1.01217	0.0456	0.7906		-
rs185589943	5:130623331	T/C	CDC42SE2	intron	0.790	1.00310	0.0634	0.9609		-
rs188968086	5:130686302	T/G	CDC42SE2	intron	0.705	1.00682	0.0519	0.896		-
rs188972801	5:130608990	A/G	CDC42SE2	intron	0.646	0.96204	0.0610	0.5261		-
rs189028326	5:130643684	T/C	CDC42SE2	intron	0.735	0.97932	0.0348	0.5487		-
rs189161501	5:130599599	A/G	CDC42SE2	near-gene-5	0.772	1.01654	0.0299	0.5832		-
rs189779436	5:130670035	T/G	CDC42SE2	intron	0.962	0.99740	0.0529	0.9605		-
rs190790297	5:130678146	A/G	CDC42SE2	intron	0.660	1.05464	0.0494	0.2819		-
rs193159402	5:130642920	T/C	CDC42SE2	intron	0.696	0.97365	0.0385	0.4876		-
rs193531	5:130674706	T/C	CDC42SE2	intron	0.978	1.02603	0.0130	0.04742		5
rs193735	5:130672958	A/G	CDC42SE2	intron	0.974	1.01593	0.0275	0.5653		7
rs2431304	5:130726142	T/C	CDC42SE2	intron	0.991	1.02665	0.0128	0.03936		6
rs245796	5:130680184	A/G	CDC42SE2	intron	0.996	1.02204	0.0121	0.07186		7
rs245797	5:130680367	C/G	CDC42SE2	intron	0.984	0.97707	0.0121	0.0557		7
rs248654	5:130656907	A/G	CDC42SE2	intron	0.638	1.02235	0.0590	0.7084		7
rs2549011	5:130657418	C/G	CDC42SE2	intron	0.990	1.02378	0.0122	0.05387		5
rs2549012	5:130659758	A/C	CDC42SE2	intron	0.951	0.98590	0.0111	0.1983		6
rs2549017	5:130692045	T/C	CDC42SE2	intron	1.000	1.02102	0.0120	0.08379		5
rs2549018	5:130698949	T/C	CDC42SE2	intron	0.996	1.02644	0.0127	0.04028		6
rs2551036	5:130648994	A/G	CDC42SE2	intron	0.997	0.97424	0.0127	0.0405		7
rs2940608	5:130669169	T/G	CDC42SE2	intron	0.973	1.02214	0.0123	0.07646		7
rs35230219	5:130618365	A/G	CDC42SE2	intron	1.010	1.02214	0.0120	0.06766		7
rs382216	5:130687137	T/C	CDC42SE2	intron	0.849	1.01066	0.0117	0.3623		7
rs42256	5:130705906	T/C	CDC42SE2	intron	0.999	0.97697	0.0121	0.05351		6
rs4277909	5:130671950	A/G	CDC42SE2	intron	1.000	1.00020	0.0283	0.993		7
rs4706018	5:130641785	C/G	CDC42SE2	intron	0.719	0.96735	0.0499	0.5055		2b
rs4706020	5:130674076	A/G	CDC42SE2	intron	0.937	0.98255	0.0116	0.1273		6
rs59894268	5:130600224	A/G	CDC42SE2	intron	0.988	1.00582	0.0314	0.8535		4
rs62391407	5:130609192	T/G	CDC42SE2	intron	0.956	0.97961	0.0120	0.08616		7
rs62391414	5:130643209	A/G	CDC42SE2	intron	0.876	0.98324	0.0115	0.1416		6
rs6421901	5:130648484	A/G	CDC42SE2	intron	0.930	1.03035	0.0129	0.02044		5
rs6596008	5:130603119	A/G	CDC42SE2	intron	1.010	1.02255	0.0120	0.06264		6
rs6596009	5:130608093	A/C	CDC42SE2	intron	0.993	0.98118	0.0133	0.1524		6
rs6596010	5:130625411	A/G	CDC42SE2	intron	0.997	0.97492	0.0127	0.04515		7
rs6596011	5:130648454	T/C	CDC42SE2	intron	0.894	0.98334	0.0112	0.135		6
rs6596012	5:130648455	A/G	CDC42SE2	intron	0.897	1.02521	0.0120	0.0384		6
rs6596013	5:130651969	T/C	CDC42SE2	intron	1.000	1.00230	0.0288	0.9358		5
rs6596016	5:130672625	A/G	CDC42SE2	intron	1.010	1.00060	0.0282	0.9823		5
rs6596017	5:130672947	C/G	CDC42SE2	intron	0.939	0.99850	0.0312	0.9622		6
rs6863990	5:130667881	A/G	CDC42SE2	intron	0.959	0.99332	0.0314	0.83		6
rs6864145	5:130637861	T/C	CDC42SE2	intron	0.997	0.97492	0.0127	0.04544		7
rs6864413	5:130637868	T/G	CDC42SE2	intron	0.998	0.97511	0.0127	0.04704		7
rs6866768	5:130620278	T/C	CDC42SE2	intron	0.999	0.99710	0.0290	0.9205		7
rs6868218	5:130668123	A/G	CDC42SE2	intron	0.972	1.00521	0.0298	0.8623		6
rs6868645	5:130638030	A/G	CDC42SE2	intron	0.941	0.99481	0.0308	0.8668		7
rs6869961	5:130694814	T/G	CDC42SE2	intron	1.000	1.00080	0.0288	0.9783		6
rs6872533	5:130651211	A/G	CDC42SE2	intron	0.999	0.98030	0.0173	0.2521		5
rs6872972	5:130621533	T/C	CDC42SE2	intron	1.000	0.97511	0.0127	0.04723		5
rs6874969	5:130669764	A/G	CDC42SE2	intron	0.615	1.03386	0.0360	0.3546		6
rs6876350	5:130604109	T/G	CDC42SE2	intron	1.000	0.97570	0.0127	0.05218		6
rs6877958	5:130709988	A/G	CDC42SE2	intron	1.000	0.99382	0.0320	0.8472		5
rs6879005	5:130615445	T/C	CDC42SE2	intron	1.000	0.97541	0.0127	0.05001		7
rs6882151	5:130619057	T/G	CDC42SE2	intron	1.000	0.99223	0.0320	0.8076		2b
rs6882481	5:130619227	T/C	CDC42SE2	intron	0.993	1.02398	0.0126	0.06125		7
rs6884108	5:130676475	A/G	CDC42SE2	intron	0.977	1.00511	0.0298	0.8637		7
rs6884517	5:130676468	T/G	CDC42SE2	intron	0.979	0.99601	0.0290	0.8914		7
rs6885947	5:130602158	T/C	CDC42SE2	intron	0.997	0.99651	0.0291	0.9045		5
rs6888325	5:130629538	T/C	CDC42SE2	intron	1.000	0.99720	0.0288	0.9215		7
rs6888994	5:130694707	A/G	CDC42SE2	intron	1.010	1.00020	0.0281	0.9948		7
rs6892016	5:130642484	A/C	CDC42SE2	intron	1.010	0.99840	0.0281	0.9547		7
rs6894704	5:130688654	A/G	CDC42SE2	intron	1.000	0.99960	0.0317	0.9892		6
rs6896577	5:130669765	T/C	CDC42SE2	intron	0.660	0.99690	0.0322	0.9234		6
rs6897209	5:130666121	A/G	CDC42SE2	intron	1.000	1.00723	0.0318	0.8221		6
rs6897798	5:130673697	A/G	CDC42SE2	intron	1.000	1.00210	0.0288	0.9411		7
rs72787032	5:130604046	A/G	CDC42SE2	intron	0.964	1.04749	0.0340	0.1728		7
rs72787045	5:130665854	A/G	CDC42SE2	intron	0.766	1.01217	0.0250	0.6267		5
rs72787051	5:130707203	A/G	CDC42SE2	intron	0.953	1.05464	0.0345	0.1224		6
rs73249204	5:130625432	A/T	CDC42SE2	intron	1.000	0.99740	0.0288	0.9279		6
rs73249208	5:130630090	C/G	CDC42SE2	intron	1.000	1.00280	0.0288	0.9222		7
rs73262392	5:130616188	T/C	CDC42SE2	intron	1.000	1.00672	0.0320	0.8352		5
rs75980867	5:130690506	A/G	CDC42SE2	intron	0.855	0.97346	0.0428	0.5295		6
rs76340516	5:130719197	A/G	CDC42SE2	intron	0.834	0.99930	0.0444	0.9869		6
rs7718039	5:130652115	T/G	CDC42SE2	intron	1.000	0.99690	0.0287	0.9136		7
rs78623258	5:130628103	A/G	CDC42SE2	intron	0.903	1.00250	0.0137	0.8556		6
rs78968873	5:130724530	A/T	CDC42SE2	intron	0.690	1.02634	0.0325	0.4233		6
rs798406	5:130689163	T/C	CDC42SE2	intron	1.000	0.97736	0.0120	0.05737		6
rs798407	5:130688378	C/G	CDC42SE2	intron	1.000	0.97726	0.0120	0.0564		7
rs798412	5:130698474	A/C	CDC42SE2	intron	0.995	1.02634	0.0127	0.04111		6
rs798415	5:130693723	T/G	CDC42SE2	intron	0.994	0.97472	0.0127	0.04464		4
rs80311787	5:130618866	T/C	CDC42SE2	intron	0.930	0.98541	0.0155	0.3421		5
rs9327606	5:130636430	T/C	CDC42SE2	intron	1.000	1.00010	0.0290	0.9971		6
rs9327607	5:130636454	T/C	CDC42SE2	intron	0.836	1.02061	0.0126	0.1045		7
rs9327608	5:130650134	A/G	CDC42SE2	intron	0.997	0.97424	0.0127	0.04054		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information