C2orf69

Basic Information

Gene Symbol	C2orf69
Entrez Id	205327
Position	chr2:200775979..200792996
Description	chromosome 2 open reading frame 69
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10202253	2:200793205	A/G	C2orf69	near-gene-3	0.997	0.96754	0.0106	0.001815		5
rs116378534	2:200787166	T/C	C2orf69	intron	0.839	1.05012	0.0357	0.1717		5
rs12474280	2:200778850	T/C	C2orf69	intron	1.000	1.03293	0.0249	0.1941		7
rs12475089	2:200784857	T/G	C2orf69	intron	1.000	1.03262	0.0249	0.1969		5
rs12475460	2:200779795	T/C	C2orf69	intron	0.999	1.03448	0.0249	0.1735		6
rs12475497	2:200779963	T/C	C2orf69	intron	0.998	1.04227	0.0273	0.1296		6
rs12476690	2:200790216	T/C	C2orf69	coding-synon	0.998	0.95973	0.0273	0.1325		7
rs13016447	2:200785854	T/C	C2orf69	intron	0.873	1.09144	0.0137	1.71E-10		7
rs13389195	2:200794445	T/C	C2orf69	ncRNA,untranslated-3	0.987	1.03407	0.0106	0.001606		6
rs139711637	2:200794345	C/G	C2orf69	ncRNA,untranslated-3	0.628	1.08893	0.0613	0.1646		-
rs141817975	2:200781336	T/C	C2orf69	intron	0.957	1.05264	0.0288	0.0747		-
rs141860563	2:200780291	A/G	C2orf69	intron	0.991	0.95113	0.0285	0.07857		-
rs148336682	2:200781947	A/G	C2orf69	intron	0.822	0.98334	0.0426	0.6927		-
rs1509834	2:200787553	A/C	C2orf69	intron	0.997	0.96744	0.0106	0.001734		7
rs166849	2:200778866	A/G	C2orf69	intron	0.998	0.95323	0.0107	8.032E-6		6
rs16832051	2:200793784	T/C	C2orf69	ncRNA,untranslated-3	1.000	1.01542	0.0144	0.2889		5
rs17591036	2:200792104	A/G	C2orf69	untranslated-3	0.983	1.05517	0.0287	0.06143		7
rs176010	2:200785035	T/C	C2orf69	intron	0.985	0.95056	0.0223	0.02282		7
rs181970294	2:200786930	C/G	C2orf69	intron	0.937	0.92709	0.0674	0.2612		-
rs186546506	2:200777930	A/G	C2orf69	intron	0.947	0.90846	0.0132	3.6E-13		-
rs187118646	2:200785551	T/C	C2orf69	intron	0.989	0.97190	0.0319	0.3707		-
rs189931958	2:200777903	A/T	C2orf69	intron	0.629	1.05813	0.0303	0.06231		-
rs191220855	2:200778130	A/G	C2orf69	intron	0.810	1.01278	0.0136	0.3511		-
rs281760	2:200787804	A/G	C2orf69	intron	1.000	1.10098	0.0133	4.713E-13		4
rs281788	2:200783705	A/T	C2orf69	intron	1.000	1.10131	0.0133	3.956E-13		5
rs281789	2:200780698	T/G	C2orf69	intron	1.000	1.10098	0.0133	4.547E-13		7
rs35220450	2:200780737	T/C	C2orf69	intron	0.992	0.90520	0.0137	4.047E-13		7
rs60738719	2:200787264	C/G	C2orf69	intron	1.000	0.98334	0.0144	0.2449		6
rs61005383	2:200786433	A/G	C2orf69	intron	0.997	1.03666	0.0234	0.1229		6
rs61176471	2:200787401	T/C	C2orf69	intron	1.000	0.98334	0.0144	0.2447		7
rs62178345	2:200776353	T/G	C2orf69	near-gene-5,missense	0.978	1.01491	0.0143	0.301		4
rs62178346	2:200776865	T/G	C2orf69	intron,near-gene-5	0.995	0.98255	0.0145	0.226		7
rs62178347	2:200782690	A/G	C2orf69	intron	1.000	0.98334	0.0144	0.2454		6
rs67567146	2:200782926	A/T	C2orf69	intron	0.995	1.05348	0.0218	0.01684		6
rs72926384	2:200784811	T/C	C2orf69	intron	0.809	1.16614	0.0601	0.01058		5
rs73066802	2:200785572	A/G	C2orf69	intron	0.899	0.94111	0.0121	5.618E-7		6
rs74182322	2:200777917	A/C	C2orf69	intron	0.899	1.04091	0.0112	0.0003407		6
rs75214378	2:200785658	A/G	C2orf69	intron	1.000	0.96831	0.0249	0.1967		6
rs75583675	2:200791914	A/G	C2orf69	untranslated-3	0.842	0.97775	0.0506	0.6564		6
rs77160058	2:200793324	A/G	C2orf69	near-gene-3	0.989	0.99930	0.0404	0.9856		5
rs78419528	2:200781883	A/G	C2orf69	intron	1.000	0.96822	0.0249	0.1954		4
rs79284723	2:200787036	A/G	C2orf69	intron	0.985	0.96735	0.0253	0.1893		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information