C2orf47

Basic Information

Gene Symbol	C2orf47
Entrez Id	79568
Position	chr2:200820040..200828848
Description	chromosome 2 open reading frame 47
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs16832105	2:200822307	C/G	C2orf47	intron,near-gene-5	1.000	1.01400	0.0144	0.3364		7
rs16832106	2:200827421	A/G	C2orf47	intron	1.000	1.01400	0.0144	0.3339		6
rs17591211	2:200827654	A/T	C2orf47	intron	0.994	1.03490	0.0106	0.001187		6
rs17591218	2:200828102	A/G	C2orf47	intron	1.000	0.97268	0.0253	0.273		6
rs182904442	2:200822924	T/C	C2orf47	intron	0.656	1.11238	0.0646	0.09918		-
rs183248918	2:200822008	T/C	C2orf47	intron,near-gene-5	0.656	0.89906	0.0646	0.09936		-
rs192048072	2:200821937	T/C	C2orf47	intron,near-gene-5	0.603	1.00461	0.0435	0.9148		-
rs2118548	2:200828526	A/T	C2orf47	ncRNA,missense,untranslated-3	0.683	0.99571	0.0565	0.9388		6
rs281768	2:200825240	A/T	C2orf47	intron	0.981	1.10561	0.0132	3.468E-14		6
rs34998043	2:200823868	A/G	C2orf47	intron	0.900	0.97853	0.0263	0.4106		6
rs73068746	2:200829342	T/G	C2orf47	near-gene-3	0.989	0.94252	0.0219	0.006805		6
rs74586459	2:200823059	T/C	C2orf47	intron	0.999	0.96329	0.0278	0.1794		6
rs76225625	2:200823523	T/C	C2orf47	intron	1.000	0.98639	0.0144	0.3405		6
rs76518299	2:200823063	A/T	C2orf47	intron	0.999	1.03811	0.0278	0.1793		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information