BCL9

Basic Information

Gene Symbol	BCL9
Entrez Id	607
Position	chr1:147013182..147098017
Description	B-cell CLL/lymphoma 9
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1027424	1:147018361	A/G	BCL9	intron	0.992	1.02112	0.0185	0.2595		7
rs10465881	1:147067318	A/G	BCL9	intron	0.971	1.02501	0.0174	0.154		5
rs10494249	1:147039504	C/G	BCL9	intron	0.869	0.99372	0.0322	0.8452		5
rs10494250	1:147024047	A/G	BCL9	intron	0.998	1.01217	0.0212	0.569		7
rs10494251	1:147023894	T/C	BCL9	intron	0.999	1.00874	0.0212	0.6823		7
rs10494252	1:147016936	A/C	BCL9	intron	0.993	1.00562	0.0217	0.7954		4
rs10793689	1:147019163	T/C	BCL9	intron	0.985	1.01116	0.0110	0.3106		5
rs10793690	1:147035577	T/C	BCL9	intron	0.956	0.98787	0.0190	0.519		6
rs10793692	1:147056283	A/T	BCL9	intron	0.942	1.00541	0.0143	0.7038		6
rs10793693	1:147064299	C/G	BCL9	intron	0.972	0.97668	0.0173	0.1722		7
rs10900376	1:147013362	A/G	BCL9	untranslated-5	0.985	1.01086	0.0111	0.3302		4
rs10900377	1:147018033	A/G	BCL9	intron	0.987	0.97668	0.0185	0.2019		7
rs10900379	1:147054857	A/G	BCL9	intron	0.936	1.00250	0.0149	0.867		7
rs10900380	1:147055941	T/C	BCL9	intron	0.851	1.02460	0.0218	0.2655		6
rs10900382	1:147058797	T/G	BCL9	intron	0.933	1.00300	0.0143	0.833		5
rs10900383	1:147068238	T/C	BCL9	intron	0.880	1.03272	0.0172	0.06199		7
rs111301971	1:147040926	T/C	BCL9	intron	0.851	1.07605	0.0471	0.1196		7
rs111631962	1:147069590	A/G	BCL9	intron,near-gene-5	0.671	1.00381	0.0561	0.9465		6
rs111950777	1:147065684	A/G	BCL9	intron	0.921	1.02912	0.0434	0.5084		7
rs11240082	1:147050595	T/C	BCL9	intron	0.932	0.99990	0.0109	0.9962		6
rs112597440	1:147059890	A/G	BCL9	intron	0.929	0.97356	0.0435	0.5385		7
rs112603460	1:147034783	T/C	BCL9	intron	0.855	0.92932	0.0469	0.1184		4
rs113085271	1:147070727	T/C	BCL9	intron,near-gene-5	0.731	0.99074	0.0555	0.8676		4
rs113713417	1:147033847	T/C	BCL9	intron	0.855	1.07573	0.0469	0.1197		5
rs113817032	1:147065653	A/G	BCL9	intron	0.685	0.98965	0.0566	0.8542		7
rs113993856	1:147065515	T/C	BCL9	intron	0.921	0.97181	0.0434	0.5104		7
rs114261745	1:147034967	T/C	BCL9	intron	0.930	1.05464	0.0366	0.146		7
rs114676148	1:147048251	A/G	BCL9	intron	0.815	1.03666	0.0401	0.3693		7
rs114769747	1:147026997	T/C	BCL9	intron	0.925	1.01867	0.0285	0.5155		7
rs114966499	1:147075966	A/C	BCL9	intron	0.834	1.05876	0.0385	0.1383		2b
rs115058963	1:147071696	A/G	BCL9	intron,near-gene-5	0.845	0.98383	0.0322	0.6125		4
rs115222435	1:147053675	A/G	BCL9	intron	0.921	1.03427	0.0435	0.4389		7
rs115275955	1:147022329	A/G	BCL9	intron	0.932	0.97844	0.0284	0.4428		5
rs115838075	1:147041838	A/T	BCL9	intron	0.671	1.01888	0.0616	0.7616		7
rs116009059	1:147061198	T/C	BCL9	intron	0.930	0.97434	0.0434	0.5494		6
rs116077122	1:147076780	A/G	BCL9	intron	0.882	1.02860	0.0442	0.5233		7
rs116161634	1:147088133	T/C	BCL9	intron	0.746	0.98708	0.0460	0.7773		7
rs116216883	1:147073973	A/G	BCL9	intron	0.879	0.97687	0.0441	0.5956		6
rs116523799	1:147076716	T/C	BCL9	intron	0.725	1.02316	0.0268	0.3915		6
rs117395028	1:147039796	T/C	BCL9	intron	0.852	1.07627	0.0471	0.1184		4
rs12057830	1:147071283	C/G	BCL9	intron,near-gene-5	0.658	0.98955	0.0147	0.4752		2b
rs12059427	1:147072431	A/G	BCL9	intron	0.909	1.06865	0.0457	0.1461		4
rs12072533	1:147017524	A/C	BCL9	intron	0.970	0.94082	0.0333	0.06654		6
rs12075087	1:147018885	A/G	BCL9	intron	0.973	0.95056	0.0335	0.1305		7
rs12076319	1:147018782	A/T	BCL9	intron	0.996	1.00803	0.0217	0.7112		6
rs12081028	1:147022697	T/C	BCL9	intron	0.995	0.99223	0.0217	0.7186		5
rs12096043	1:147060953	T/C	BCL9	intron	0.919	1.04029	0.0448	0.378		6
rs12097989	1:147060931	A/C	BCL9	intron	0.931	0.96676	0.0483	0.4849		7
rs12118839	1:147078598	T/G	BCL9	untranslated-5	0.923	0.98030	0.0186	0.2847		7
rs12122799	1:147082026	A/G	BCL9	intron	0.963	1.01157	0.0142	0.4177		7
rs12126758	1:147076702	A/G	BCL9	untranslated-5	0.852	1.02768	0.0162	0.09155		7
rs12127408	1:147016102	A/G	BCL9	intron	0.984	0.98896	0.0110	0.3106		5
rs12133943	1:147095081	C/G	BCL9	intron	0.940	1.01867	0.0187	0.3229		7
rs138814070	1:147037763	T/C	BCL9	intron	0.817	1.01806	0.0625	0.7741		-
rs138902045	1:147033872	C/G	BCL9	intron	0.855	0.92960	0.0469	0.1196		-
rs138996047	1:147018018	A/G	BCL9	intron	0.979	1.00491	0.0216	0.8215		-
rs139117396	1:147044663	A/G	BCL9	intron	0.789	1.06631	0.0445	0.1498		-
rs139816666	1:147038655	A/G	BCL9	intron	0.749	1.10683	0.0444	0.02223		-
rs140560919	1:147036300	T/C	BCL9	intron	0.789	1.06620	0.0446	0.1504		-
rs140640877	1:147093450	T/C	BCL9	intron	0.793	0.94535	0.0541	0.299		-
rs140774300	1:147068397	A/G	BCL9	intron	0.859	1.03977	0.0377	0.3016		-
rs140873312	1:147025153	T/G	BCL9	intron	0.780	1.08264	0.0642	0.2162		-
rs141325157	1:147041306	A/G	BCL9	intron	0.669	1.01582	0.0454	0.7304		-
rs142315514	1:147050816	A/C	BCL9	intron	0.899	0.95782	0.0312	0.167		-
rs143333817	1:147027578	A/G	BCL9	intron	0.705	1.00833	0.0593	0.8883		-
rs143595732	1:147043795	A/G	BCL9	intron	0.849	1.07616	0.0473	0.1203		-
rs144575417	1:147050455	T/G	BCL9	intron	0.811	0.89790	0.0460	0.01925		-
rs144835012	1:147063187	T/C	BCL9	intron	0.763	1.10252	0.0667	0.1435		-
rs146644895	1:147036518	T/C	BCL9	intron	0.684	0.95772	0.0648	0.5056		-
rs146766980	1:147073756	A/G	BCL9	intron	0.904	1.01390	0.0369	0.7082		-
rs149038085	1:147020818	T/C	BCL9	intron	0.932	0.97834	0.0284	0.4401		-
rs150011608	1:147061778	T/C	BCL9	intron	0.782	1.02901	0.0645	0.6572		-
rs150257843	1:147032313	A/C	BCL9	intron	0.856	0.92969	0.0469	0.1204		-
rs150398775	1:147042602	T/C	BCL9	intron	0.845	1.07627	0.0467	0.1155		-
rs1541187	1:147051493	T/C	BCL9	intron	0.957	1.00080	0.0137	0.9544		4
rs1546160	1:147030352	A/T	BCL9	intron	0.923	1.03728	0.0305	0.2296		5
rs1546161	1:147030457	A/G	BCL9	intron	0.954	0.99800	0.0134	0.8826		7
rs1572826	1:147043262	C/G	BCL9	intron	0.928	1.04310	0.0307	0.1689		5
rs1612689	1:147058844	A/C	BCL9	intron	0.802	0.97482	0.0225	0.2558		5
rs1692190	1:147058842	A/C	BCL9	intron	0.862	0.97893	0.0182	0.2407		5
rs17160408	1:147020638	A/T	BCL9	intron	0.998	0.99571	0.0217	0.8417		6
rs17160413	1:147021421	C/G	BCL9	intron	0.984	1.01390	0.0135	0.3076		5
rs17160420	1:147024642	A/G	BCL9	intron	0.860	0.92923	0.0470	0.1184		5
rs17160421	1:147024797	T/C	BCL9	intron	0.859	0.92932	0.0470	0.1188		5
rs17160422	1:147024875	T/C	BCL9	intron	0.859	0.92941	0.0470	0.1192		5
rs17160424	1:147025698	A/T	BCL9	intron	0.859	1.07595	0.0470	0.1191		7
rs17160428	1:147027223	T/C	BCL9	intron	0.852	1.07240	0.0465	0.1332		6
rs17160431	1:147027867	A/G	BCL9	intron	0.858	0.92941	0.0470	0.1192		6
rs17160433	1:147028654	A/T	BCL9	intron	0.858	1.07573	0.0470	0.1198		5
rs17160434	1:147032581	C/G	BCL9	intron	0.854	1.07605	0.0469	0.1181		7
rs17160437	1:147037469	A/C	BCL9	intron	0.853	0.92886	0.0470	0.1164		5
rs17160448	1:147044855	T/G	BCL9	intron	0.949	1.00300	0.0239	0.9013		7
rs17160461	1:147049876	T/C	BCL9	intron	0.921	1.02112	0.0220	0.3412		7
rs17160476	1:147093674	A/G	BCL9	intron	0.979	0.98403	0.0141	0.2538		7
rs187529869	1:147071268	T/G	BCL9	intron,near-gene-5	0.683	1.05707	0.0582	0.3406		-
rs188327454	1:147028102	A/G	BCL9	intron	0.907	1.01826	0.0282	0.5195		-
rs188944555	1:147041250	A/G	BCL9	intron	0.847	0.92997	0.0466	0.1189		-
rs189735065	1:147083080	A/G	BCL9	intron	0.953	1.05075	0.0461	0.2823		-
rs193016208	1:147055582	A/G	BCL9	intron	0.681	0.93857	0.0668	0.3425		-
rs1989733	1:147020950	A/G	BCL9	intron	0.972	1.05159	0.0336	0.1339		7
rs2068024	1:147019680	T/C	BCL9	intron	0.932	1.02224	0.0284	0.438		6
rs2132440	1:147040075	A/T	BCL9	intron	0.963	0.99820	0.0113	0.8736		5
rs2132441	1:147062571	T/C	BCL9	intron	0.981	0.97893	0.0153	0.1645		6
rs2236570	1:147093887	A/G	BCL9	intron	0.993	0.97951	0.0114	0.06994		6
rs2353525	1:147068992	T/G	BCL9	intron	0.975	0.97814	0.0154	0.1519		7
rs2353542	1:147040940	A/T	BCL9	intron	0.962	1.00180	0.0113	0.8753		6
rs2353543	1:147042650	T/C	BCL9	intron	0.962	0.99780	0.0113	0.8429		6
rs2353544	1:147048600	A/G	BCL9	intron	0.959	1.00110	0.0113	0.9249		7
rs2644555	1:147089347	A/T	BCL9	intron	0.961	1.02788	0.0119	0.02054		5
rs2644556	1:147089346	T/G	BCL9	intron	0.963	0.97317	0.0119	0.02221		5
rs2792083	1:147089318	T/C	BCL9	intron	0.980	1.01238	0.0107	0.25		5
rs28633140	1:147015933	A/C	BCL9	intron	0.985	0.99015	0.0216	0.6472		3a
rs34832387	1:147080180	T/C	BCL9	intron	0.955	1.00864	0.0148	0.5588		7
rs35669952	1:147085066	A/G	BCL9	intron	0.961	1.00723	0.0152	0.6369		5
rs3806218	1:147011783	T/C	BCL9	near-gene-5	0.983	1.00975	0.0110	0.377		5
rs3820129	1:147091972	T/C	BCL9	missense	0.990	1.01847	0.0109	0.09291		6
rs41295835	1:147092881	T/C	BCL9	intron	0.701	1.02337	0.0271	0.395		7
rs4950460	1:147015179	T/C	BCL9	intron	0.984	1.01076	0.0110	0.3284		7
rs4950461	1:147033573	A/G	BCL9	intron	0.961	1.01035	0.0189	0.5875		5
rs4950462	1:147073777	T/C	BCL9	intron	0.913	1.02562	0.0176	0.1512		7
rs4950463	1:147074032	A/T	BCL9	intron	0.869	1.02881	0.0171	0.09675		7
rs4950464	1:147074068	A/G	BCL9	intron	0.881	0.98167	0.0154	0.2319		7
rs5005683	1:147037604	T/C	BCL9	intron	0.926	1.04258	0.0306	0.1735		5
rs59188898	1:147058118	A/C	BCL9	intron	0.917	1.06492	0.0438	0.1504		6
rs59380064	1:147048957	T/C	BCL9	intron	0.902	0.94810	0.0372	0.1522		7
rs594132	1:147013836	A/C	BCL9	intron	0.983	0.98857	0.0116	0.3217		4
rs594206	1:147020456	A/G	BCL9	intron	0.983	0.98570	0.0133	0.2811		6
rs61751616	1:147090956	T/C	BCL9	missense	0.880	0.94658	0.0476	0.2489		5
rs61751617	1:147091689	A/G	BCL9	coding-synon	0.758	0.96686	0.0269	0.2096		7
rs61751618	1:147096112	A/G	BCL9	missense	0.845	1.01045	0.0517	0.8403		7
rs61754125	1:147092112	A/G	BCL9	coding-synon	0.882	1.00421	0.0362	0.9068		6
rs61838383	1:147053440	T/G	BCL9	intron	0.788	1.00733	0.0167	0.6608		5
rs61838398	1:147075180	A/G	BCL9	intron	0.717	0.99094	0.0231	0.6938		7
rs61838402	1:147085212	C/G	BCL9	intron	0.917	0.94573	0.0249	0.02488		7
rs627219	1:147073355	A/C	BCL9	intron	0.953	1.00040	0.0223	0.9857		5
rs627548	1:147056608	A/C	BCL9	intron	0.906	0.98797	0.0190	0.5221		7
rs628928	1:147056280	A/C	BCL9	intron	0.957	0.95151	0.0224	0.02645		6
rs637784	1:147060345	A/G	BCL9	intron	0.961	1.05643	0.0264	0.03759		7
rs645388	1:147059131	C/G	BCL9	intron	0.955	0.95476	0.0232	0.04582		4
rs649001	1:147066272	T/C	BCL9	intron	0.964	0.99651	0.0220	0.8728		7
rs656323	1:147017140	T/C	BCL9	intron	0.980	0.98610	0.0134	0.2964		4
rs658357	1:147054233	A/G	BCL9	intron	0.956	0.95151	0.0224	0.02689		6
rs6593793	1:147026330	T/C	BCL9	intron	0.915	1.03904	0.0307	0.2126		7
rs662997	1:147021452	A/C	BCL9	intron	0.922	0.94620	0.0320	0.08367		5
rs6657449	1:147015542	T/G	BCL9	intron	0.977	0.97893	0.0186	0.2518		7
rs6659237	1:147026125	C/G	BCL9	intron	0.917	1.04216	0.0309	0.1815		6
rs6666306	1:147029474	A/G	BCL9	intron	0.961	1.00050	0.0115	0.9653		6
rs672607	1:147053340	A/G	BCL9	intron	0.956	1.05232	0.0261	0.0513		6
rs672619	1:147058575	A/T	BCL9	intron	0.955	0.95648	0.0231	0.05443		6
rs688325	1:147077283	A/G	BCL9	intron	0.936	0.99432	0.0161	0.7222		7
rs71620823	1:147077785	T/C	BCL9	intron	0.714	1.02163	0.0562	0.7035		6
rs716703	1:147021148	T/C	BCL9	intron	0.932	1.03552	0.0327	0.2858		6
rs72698253	1:147022059	T/G	BCL9	intron	0.811	0.97912	0.0237	0.375		7
rs72698263	1:147028961	A/T	BCL9	intron	0.808	0.97912	0.0241	0.3817		6
rs72698273	1:147038722	C/G	BCL9	intron	0.943	0.99641	0.0119	0.7626		5
rs72698278	1:147042337	A/G	BCL9	intron	0.799	1.01238	0.0313	0.6948		7
rs73007972	1:147052655	C/G	BCL9	intron	0.913	1.03179	0.0489	0.5227		6
rs73009861	1:147070456	T/C	BCL9	intron,near-gene-5	0.919	1.05802	0.0441	0.2005		4
rs74125727	1:147017714	A/T	BCL9	intron	0.953	1.05411	0.0345	0.1264		5
rs74594247	1:147057319	A/G	BCL9	intron	0.855	0.96281	0.0239	0.1131		7
rs74609846	1:147045875	C/G	BCL9	intron	0.654	1.02020	0.0407	0.6226		6
rs74698160	1:147035120	A/C	BCL9	intron	0.855	0.92914	0.0469	0.1176		5
rs74887628	1:147032779	A/G	BCL9	intron	0.895	0.95801	0.0312	0.1691		3a
rs74891485	1:147085340	C/G	BCL9	intron	0.745	1.03231	0.0268	0.2363		7
rs74923026	1:147048153	T/C	BCL9	intron	0.793	0.98138	0.0234	0.4236		6
rs75167072	1:147095052	T/C	BCL9	intron	0.965	1.04875	0.0458	0.2988		7
rs7523564	1:147040430	A/C	BCL9	intron	0.800	1.02030	0.0247	0.4159		5
rs75456016	1:147027306	T/G	BCL9	intron	0.858	1.07595	0.0470	0.1194		6
rs75546320	1:147048845	A/T	BCL9	intron	0.907	0.98669	0.0285	0.638		6
rs76093248	1:147080763	T/C	BCL9	intron	0.695	0.99960	0.0396	0.9916		7
rs76170364	1:147039994	A/T	BCL9	intron	0.958	1.01542	0.0217	0.4791		5
rs76173796	1:147052072	T/C	BCL9	intron	0.823	0.99005	0.0266	0.7052		5
rs76250423	1:147025611	A/C	BCL9	intron	0.859	0.92941	0.0470	0.1191		7
rs76537244	1:147047550	T/C	BCL9	intron	0.912	1.01501	0.0284	0.5991		6
rs76541373	1:147037444	T/G	BCL9	intron	0.807	1.04907	0.0362	0.1865		5
rs76606843	1:147036062	A/C	BCL9	intron	0.919	0.98501	0.0284	0.5953		7
rs76669808	1:147068704	A/G	BCL9	intron	0.922	0.97375	0.0437	0.5424		7
rs76744132	1:147023733	A/G	BCL9	intron	0.913	1.05306	0.0363	0.154		7
rs76831290	1:147029566	T/C	BCL9	intron	0.857	0.92960	0.0469	0.1201		6
rs76898848	1:147085793	A/G	BCL9	intron	0.956	0.95266	0.0460	0.291		7
rs76915123	1:147041130	C/G	BCL9	intron	0.948	0.99263	0.0239	0.7557		6
rs76958244	1:147042176	C/G	BCL9	intron	0.936	1.01990	0.0190	0.2992		6
rs77019637	1:147027355	T/C	BCL9	intron	0.848	0.92756	0.0468	0.1081		6
rs77201911	1:147029442	A/C	BCL9	intron	0.857	1.07573	0.0469	0.12		6
rs77245299	1:147067648	T/G	BCL9	intron	0.917	1.00702	0.0382	0.8548		6
rs77393008	1:147034604	T/C	BCL9	intron	0.922	1.01582	0.0285	0.5816		7
rs77397313	1:147069113	A/G	BCL9	intron	0.738	0.96329	0.0271	0.1674		5
rs77546736	1:147038933	C/G	BCL9	intron	0.920	0.98413	0.0285	0.5748		6
rs77650336	1:147096505	T/C	BCL9	coding-synon	0.960	0.98926	0.0358	0.7642		6
rs77826295	1:147084493	T/C	BCL9	intron	0.955	0.95228	0.0460	0.2875		4
rs77938772	1:147050556	A/G	BCL9	intron	0.890	0.99173	0.0291	0.7753		7
rs77944781	1:147035252	A/T	BCL9	intron	0.735	1.02204	0.0411	0.5964		5
rs77985307	1:147074812	T/C	BCL9	intron	0.927	0.97229	0.0319	0.3783		5
rs78082897	1:147058901	T/C	BCL9	intron	0.837	0.98896	0.0374	0.7663		5
rs78296887	1:147033583	C/G	BCL9	intron	0.856	0.92960	0.0469	0.1198		5
rs78480412	1:147040712	T/C	BCL9	intron	0.920	0.98413	0.0285	0.575		7
rs78580415	1:147048365	A/G	BCL9	intron	0.911	1.01450	0.0285	0.6136		6
rs78655444	1:147040269	A/G	BCL9	intron	0.920	1.01613	0.0285	0.5744		6
rs78684961	1:147077494	A/T	BCL9	intron	0.902	1.05201	0.0493	0.304		5
rs78705734	1:147063332	C/G	BCL9	intron	0.926	1.03200	0.0433	0.4672		5
rs79019045	1:147043167	A/C	BCL9	intron	0.844	0.93007	0.0467	0.1208		5
rs79225281	1:147040303	C/G	BCL9	intron	0.940	1.06056	0.0373	0.1147		7
rs79381935	1:147069914	C/G	BCL9	intron,near-gene-5	0.902	0.96387	0.0431	0.3938		2b
rs79470526	1:147043307	A/T	BCL9	intron	0.946	0.99263	0.0239	0.7578		5
rs79565532	1:147011822	C/G	BCL9	near-gene-5	0.973	0.99561	0.0363	0.9041		4
rs79574933	1:147037569	T/C	BCL9	intron	0.918	1.01572	0.0284	0.5828		5
rs79591424	1:147093378	T/C	BCL9	intron	0.901	0.97883	0.0551	0.6973		6
rs79619409	1:147048229	T/C	BCL9	intron	0.911	1.01461	0.0285	0.6101		7
rs79702372	1:147040893	A/G	BCL9	intron	0.920	0.98403	0.0285	0.5707		7
rs79751313	1:147088273	A/G	BCL9	intron	0.958	0.95313	0.0459	0.2953		6
rs79814755	1:147045830	A/G	BCL9	intron	0.916	1.01643	0.0285	0.568		7
rs79831270	1:147061016	T/C	BCL9	intron	0.931	0.97395	0.0434	0.543		7
rs79893352	1:147042152	T/C	BCL9	intron	0.872	0.97200	0.0372	0.4453		7
rs79904360	1:147041969	A/G	BCL9	intron	0.851	0.92960	0.0471	0.1208		7
rs80085447	1:147043017	A/G	BCL9	intron	0.920	0.98423	0.0285	0.5764		5
rs80219350	1:147063988	T/C	BCL9	intron	0.762	1.06439	0.0417	0.1345		7
rs80250556	1:147040610	T/G	BCL9	intron	0.920	1.01613	0.0285	0.5748		5
rs80260865	1:147037828	A/G	BCL9	intron	0.942	1.00944	0.0239	0.6943		6
rs80312516	1:147091416	A/G	BCL9	coding-synon	0.961	1.04886	0.0458	0.2982		5
rs867270	1:147096794	A/G	BCL9	untranslated-3	0.994	0.98946	0.0171	0.5332		5
rs9326555	1:147022306	C/G	BCL9	intron	0.986	0.98610	0.0135	0.301		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
18668039	GWAS	Phase I: 1433 cases and 33250 controls; Phase II: 3285 cases and 7953 controls
18668038	GWAS	3391 cases; 3181 controls
19880096	GWAS	575 cases; 564 controls
19181681	GWAS	471 cases; 2792 controls
Reference	Study type	Sample size

eQTL Information