ATP2A2

Basic Information

Gene Symbol	ATP2A2
Entrez Id	488
Position	chr12:110719032..110788898
Description	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10774600	12:110741356	T/C	ATP2A2	intron	0.860	0.97775	0.0151	0.137		7
rs11065627	12:110763354	C/G	ATP2A2	intron	0.990	0.92496	0.0298	0.008903		7
rs11065628	12:110766166	A/C	ATP2A2	intron	0.971	0.95361	0.0115	0.00003699		7
rs11065630	12:110775989	A/G	ATP2A2	intron	0.678	0.98354	0.0390	0.6703		7
rs11065631	12:110778383	A/G	ATP2A2	intron	0.997	1.05866	0.0195	0.003432		6
rs111631659	12:110720327	A/G	ATP2A2	intron	1.000	1.07519	0.0575	0.2075		4
rs112051880	12:110742410	A/G	ATP2A2	intron	0.998	1.07401	0.0576	0.2148		3a
rs112303164	12:110739719	A/T	ATP2A2	intron	0.622	0.99541	0.0573	0.9365		5
rs112414115	12:110769301	T/C	ATP2A2	intron	0.983	0.94082	0.0195	0.001725		7
rs114027803	12:110767952	T/G	ATP2A2	intron	0.998	0.93370	0.0576	0.234		7
rs114089175	12:110782449	A/G	ATP2A2	intron	0.998	1.07101	0.0576	0.2335		4
rs114230839	12:110761021	A/G	ATP2A2	intron	0.998	0.93370	0.0576	0.2341		5
rs114237445	12:110748636	A/G	ATP2A2	intron	0.998	0.93361	0.0576	0.2334		6
rs115160950	12:110782875	A/G	ATP2A2	intron	0.998	0.93361	0.0576	0.2334		5
rs115325329	12:110763357	T/C	ATP2A2	intron	0.998	0.93370	0.0576	0.2341		7
rs115349765	12:110770096	A/G	ATP2A2	intron	0.998	1.07090	0.0576	0.2342		6
rs115727513	12:110742096	T/G	ATP2A2	intron	0.998	1.07358	0.0576	0.2172		4
rs115845250	12:110773570	T/C	ATP2A2	intron	0.998	1.07090	0.0576	0.2343		5
rs115845889	12:110786609	A/G	ATP2A2	intron,untranslated-3	0.998	0.93351	0.0576	0.2324		3a
rs116034712	12:110764034	A/G	ATP2A2	intron	0.998	0.93370	0.0576	0.2341		5
rs116476969	12:110755872	A/G	ATP2A2	intron	0.998	1.07101	0.0576	0.2337		5
rs116480089	12:110748142	C/G	ATP2A2	intron	0.998	1.07111	0.0576	0.2334		7
rs116911740	12:110729133	T/C	ATP2A2	intron	0.798	1.06269	0.0566	0.2831		5
rs117012384	12:110774556	A/G	ATP2A2	intron	0.985	1.07304	0.0574	0.2196		7
rs117253246	12:110730709	A/G	ATP2A2	intron	0.995	1.03873	0.0292	0.1928		7
rs117293389	12:110750094	A/T	ATP2A2	intron	0.947	0.96397	0.0297	0.2171		6
rs117368690	12:110735132	T/C	ATP2A2	intron	0.863	1.08959	0.0546	0.1161		7
rs117391689	12:110740470	T/G	ATP2A2	intron	0.823	0.95009	0.0237	0.0306		7
rs117422279	12:110736619	C/G	ATP2A2	intron	0.995	0.96271	0.0292	0.1928		7
rs117609955	12:110789332	C/G	ATP2A2	near-gene-3	0.848	1.03676	0.0399	0.3658		3a
rs117656211	12:110763925	C/G	ATP2A2	intron	0.680	1.13360	0.0453	0.005694		6
rs117734975	12:110771429	A/T	ATP2A2	intron	0.972	0.96445	0.0299	0.2264		7
rs117740426	12:110787877	T/C	ATP2A2	intron,untranslated-3	0.972	0.96445	0.0299	0.2268		4
rs118088931	12:110761075	T/C	ATP2A2	intron	0.987	0.91147	0.0228	0.00004685		7
rs12228378	12:110732781	T/C	ATP2A2	intron	0.983	0.92811	0.0300	0.01293		7
rs12228526	12:110749418	A/C	ATP2A2	intron	0.906	1.07369	0.0283	0.01194		6
rs12310834	12:110762756	A/G	ATP2A2	intron	0.984	1.06332	0.0165	0.000194		7
rs12320025	12:110742991	A/G	ATP2A2	intron	0.990	1.05971	0.0163	0.0003735		7
rs12820398	12:110723798	A/G	ATP2A2	intron	0.884	1.06439	0.0458	0.1727		7
rs138237416	12:110724051	A/G	ATP2A2	intron	1.000	1.07509	0.0575	0.2081		-
rs138870128	12:110776261	T/C	ATP2A2	intron	0.998	0.93389	0.0576	0.2352		-
rs139155700	12:110786054	T/C	ATP2A2	intron,untranslated-3	0.972	0.96445	0.0299	0.2271		-
rs139386903	12:110739367	T/C	ATP2A2	intron	1.000	1.07476	0.0575	0.2097		-
rs139435961	12:110758950	T/C	ATP2A2	intron	0.974	0.98334	0.0375	0.6539		-
rs140015491	12:110724673	A/G	ATP2A2	intron	1.000	1.07509	0.0575	0.208		-
rs140592518	12:110739415	T/G	ATP2A2	intron	0.705	0.93258	0.0579	0.2281		-
rs140879759	12:110732468	T/C	ATP2A2	intron	0.799	1.05432	0.0594	0.3733		-
rs140910528	12:110786637	A/T	ATP2A2	intron,untranslated-3	0.998	1.07122	0.0576	0.2325		-
rs141094221	12:110756559	A/G	ATP2A2	intron	0.998	1.07101	0.0576	0.2338		-
rs141147622	12:110741510	T/C	ATP2A2	intron	0.986	0.96310	0.0294	0.2011		-
rs141242745	12:110747443	T/C	ATP2A2	intron	0.973	0.96435	0.0299	0.2252		-
rs141317973	12:110731745	A/G	ATP2A2	intron	0.962	1.05601	0.0215	0.01119		-
rs141715902	12:110752966	T/C	ATP2A2	intron	0.688	1.00300	0.0386	0.9371		-
rs142360878	12:110735010	T/C	ATP2A2	intron	1.000	0.93025	0.0575	0.2084		-
rs142826405	12:110750303	T/G	ATP2A2	intron	0.927	1.09680	0.0441	0.03598		-
rs145290379	12:110744682	T/C	ATP2A2	intron	0.998	0.93249	0.0576	0.2249		-
rs146198656	12:110721912	A/G	ATP2A2	intron	1.000	0.93025	0.0575	0.2084		-
rs146314934	12:110718650	C/G	ATP2A2	near-gene-5	0.920	0.92164	0.0517	0.115		-
rs147293819	12:110729539	T/C	ATP2A2	intron	0.658	1.00894	0.0550	0.8714		-
rs147310470	12:110732440	T/C	ATP2A2	intron	1.000	0.93016	0.0575	0.2082		-
rs147684541	12:110742925	A/G	ATP2A2	intron	0.998	1.07326	0.0576	0.2196		-
rs148548810	12:110725569	A/G	ATP2A2	intron	1.000	1.07509	0.0575	0.208		-
rs148668919	12:110745138	T/C	ATP2A2	intron	0.858	0.96060	0.0321	0.2111		-
rs148774375	12:110720195	A/C	ATP2A2	intron	0.877	0.94516	0.0523	0.2804		-
rs149279614	12:110755484	C/G	ATP2A2	intron	0.973	0.96435	0.0299	0.2254		-
rs149537935	12:110744809	A/C	ATP2A2	intron	0.998	0.93249	0.0576	0.2253		-
rs149909039	12:110751149	A/G	ATP2A2	intron	0.998	0.93370	0.0576	0.2335		-
rs150557759	12:110753324	A/G	ATP2A2	intron	0.998	0.93370	0.0576	0.2336		-
rs150773563	12:110779651	A/C	ATP2A2	intron	0.998	0.93389	0.0576	0.2349		-
rs150891384	12:110728976	T/G	ATP2A2	intron	0.872	1.03107	0.0352	0.3838		-
rs151250289	12:110745615	T/G	ATP2A2	intron	0.998	0.93295	0.0576	0.2285		-
rs17187412	12:110766767	A/G	ATP2A2	intron	1.000	1.06247	0.0196	0.002005		6
rs180804221	12:110743661	A/T	ATP2A2	intron	0.998	1.07294	0.0576	0.2219		-
rs181510270	12:110772456	A/G	ATP2A2	intron	0.994	0.93632	0.0575	0.2525		-
rs182805757	12:110752816	T/C	ATP2A2	intron	0.998	0.93370	0.0576	0.2337		-
rs183118030	12:110749356	A/G	ATP2A2	intron	0.973	0.96435	0.0299	0.2253		-
rs184287715	12:110731182	T/G	ATP2A2	intron	0.862	1.03128	0.0154	0.0452		-
rs184484320	12:110732049	T/C	ATP2A2	intron	1.000	0.93137	0.0575	0.2163		-
rs184774487	12:110750511	T/C	ATP2A2	intron	0.998	0.93370	0.0576	0.2335		-
rs185320379	12:110762232	A/T	ATP2A2	intron	0.838	0.94866	0.0442	0.2335		-
rs185668768	12:110749191	A/G	ATP2A2	intron	0.875	0.96079	0.0517	0.4391		-
rs187943862	12:110737780	T/C	ATP2A2	intron	0.995	0.93146	0.0575	0.2166		-
rs188634056	12:110731462	A/G	ATP2A2	intron	1.000	1.07509	0.0575	0.2082		-
rs190689851	12:110769013	A/G	ATP2A2	intron	0.952	1.07466	0.0566	0.2034		-
rs191719539	12:110725783	A/G	ATP2A2	intron	0.899	0.97746	0.0578	0.6926		-
rs191977095	12:110785005	A/G	ATP2A2	intron,untranslated-3	0.900	0.97677	0.0573	0.6815		-
rs2098140	12:110726081	A/T	ATP2A2	intron	0.999	0.93988	0.0198	0.001729		5
rs2339511	12:110789372	A/G	ATP2A2	near-gene-3	1.000	0.94064	0.0196	0.001759		1f
rs3026433	12:110719192	C/G	ATP2A2	near-gene-5,untranslated-5	0.873	1.02378	0.0137	0.08757		4
rs3026434	12:110719675	A/G	ATP2A2	coding-synon,ncRNA	1.000	1.07466	0.0574	0.2097		4
rs3026444	12:110722632	A/G	ATP2A2	intron	1.000	1.02696	0.0131	0.04274		5
rs3026445	12:110723203	T/C	ATP2A2	intron	0.999	1.05001	0.0113	0.00001651		7
rs3026446	12:110723570	T/C	ATP2A2	intron	0.725	1.04467	0.0392	0.2648		5
rs3026447	12:110724272	T/C	ATP2A2	intron	0.998	0.94299	0.0162	0.0002992		5
rs3026452	12:110727849	A/G	ATP2A2	intron	0.979	1.08091	0.0304	0.01064		5
rs3026455	12:110746826	A/T	ATP2A2	intron	0.707	1.07659	0.0582	0.2049		5
rs3026456	12:110748735	C/G	ATP2A2	intron	1.000	0.94120	0.0196	0.002039		3a
rs3026457	12:110753198	T/C	ATP2A2	intron	0.991	1.08058	0.0298	0.009363		6
rs3026459	12:110754097	A/G	ATP2A2	intron	0.990	1.07702	0.0297	0.01249		7
rs3026465	12:110757585	A/G	ATP2A2	intron	0.939	0.95609	0.0144	0.001765		7
rs3026468	12:110758081	A/T	ATP2A2	intron	1.000	0.94120	0.0196	0.002038		5
rs3026469	12:110758351	A/G	ATP2A2	intron	0.842	1.01359	0.0378	0.7215		7
rs3026479	12:110779034	A/G	ATP2A2	intron	0.994	1.06290	0.0201	0.002419		5
rs3026482	12:110780540	A/T	ATP2A2	intron	0.975	1.02521	0.0133	0.06094		5
rs3026483	12:110780905	A/G	ATP2A2	intron	1.000	1.06194	0.0196	0.0021		5
rs3026484	12:110781360	A/G	ATP2A2	intron	0.725	0.95829	0.0391	0.2758		5
rs3026486	12:110782532	T/C	ATP2A2	intron	1.000	0.94139	0.0196	0.002065		3a
rs3026489	12:110784578	T/C	ATP2A2	intron,untranslated-3	0.682	0.97873	0.0383	0.575		6
rs35235621	12:110729807	A/G	ATP2A2	intron	0.913	1.08015	0.0476	0.1054		7
rs35685291	12:110775774	A/C	ATP2A2	intron	0.990	1.08112	0.0298	0.00891		7
rs3887669	12:110726302	T/C	ATP2A2	intron	0.977	0.91769	0.0227	0.0001573		6
rs4630352	12:110747419	A/G	ATP2A2	intron	0.988	0.95237	0.0114	0.00001936		7
rs4766428	12:110723245	T/C	ATP2A2	intron	0.941	1.07090	0.0111	7.093E-10		5
rs60219027	12:110759843	T/G	ATP2A2	intron	1.000	1.06237	0.0196	0.002061		5
rs61942560	12:110737836	T/C	ATP2A2	intron	0.984	0.97229	0.0134	0.03636		6
rs73206854	12:110731375	T/C	ATP2A2	intron	0.996	0.93754	0.0188	0.0006101		7
rs73206857	12:110767721	A/T	ATP2A2	intron	1.000	0.93969	0.0186	0.0008564		5
rs74350361	12:110771666	T/C	ATP2A2	intron	0.998	1.07079	0.0576	0.2351		6
rs74412450	12:110762093	A/G	ATP2A2	intron	0.998	1.07090	0.0576	0.2342		5
rs74434348	12:110738846	A/T	ATP2A2	intron	1.000	0.93025	0.0575	0.2085		6
rs75013764	12:110728001	C/G	ATP2A2	intron	0.995	1.02757	0.0131	0.03773		5
rs75306200	12:110736105	A/G	ATP2A2	intron	1.000	1.07498	0.0575	0.2084		5
rs75316502	12:110779629	T/C	ATP2A2	intron	0.998	0.93379	0.0576	0.2341		7
rs75415123	12:110730851	A/G	ATP2A2	intron	0.790	0.89110	0.0416	0.005622		7
rs75547854	12:110788322	A/G	ATP2A2	ncRNA,untranslated-3	0.998	1.07111	0.0576	0.2328		7
rs75730213	12:110761843	A/G	ATP2A2	intron	0.777	0.91311	0.0487	0.06177		6
rs75948658	12:110736104	A/G	ATP2A2	intron	1.000	1.07498	0.0575	0.2084		5
rs75990885	12:110750358	A/G	ATP2A2	intron	0.998	0.93370	0.0576	0.2335		7
rs76025828	12:110776080	A/G	ATP2A2	intron	0.998	0.93389	0.0576	0.2352		7
rs76413950	12:110758198	T/C	ATP2A2	intron	0.998	0.93379	0.0576	0.2347		5
rs76858926	12:110734218	T/C	ATP2A2	intron	0.999	0.97492	0.0132	0.05475		6
rs76862013	12:110743570	A/G	ATP2A2	intron	0.998	0.93202	0.0576	0.2215		7
rs77556140	12:110766717	T/C	ATP2A2	intron	0.998	1.07101	0.0576	0.234		6
rs77772702	12:110786216	C/G	ATP2A2	intron,untranslated-3	0.998	1.07122	0.0576	0.2326		4
rs78178630	12:110744872	T/C	ATP2A2	intron	0.890	0.95485	0.0212	0.02909		5
rs78262036	12:110759192	T/G	ATP2A2	intron	0.998	1.07101	0.0576	0.2339		5
rs78430188	12:110780454	T/C	ATP2A2	intron	0.998	1.07079	0.0576	0.2349		5
rs78569143	12:110763034	A/G	ATP2A2	intron	0.657	1.02963	0.0596	0.6236		7
rs78925260	12:110752215	A/G	ATP2A2	intron	0.943	0.99830	0.0452	0.9698		2b
rs78980095	12:110758142	T/C	ATP2A2	intron	0.998	0.93370	0.0576	0.2336		5
rs79685248	12:110758652	A/C	ATP2A2	intron	0.953	0.98344	0.0402	0.6777		5
rs7971568	12:110780612	A/G	ATP2A2	intron	1.000	0.94139	0.0196	0.002066		7
rs79873902	12:110758755	T/C	ATP2A2	intron	0.998	1.07069	0.0576	0.2358		7
rs80157232	12:110739527	T/C	ATP2A2	intron	1.000	0.93044	0.0575	0.21		5
rs929518	12:110735815	A/G	ATP2A2	intron	1.000	0.93081	0.0575	0.212		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information