ARHGAP1

Basic Information

Gene Symbol	ARHGAP1
Entrez Id	392
Position	chr11:46698630..46722120
Description	Rho GTPase activating protein 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10838612	11:46701728	T/G	ARHGAP1	intron	0.987	0.97844	0.0165	0.185		5
rs10838613	11:46711778	A/C	ARHGAP1	intron	0.937	1.08123	0.0145	7.305E-8		6
rs111673998	11:46713071	A/G	ARHGAP1	intron	0.746	0.95456	0.0280	0.09615		7
rs111724531	11:46700530	A/G	ARHGAP1	untranslated-3	0.975	0.93800	0.0476	0.1786		5
rs113097600	11:46713062	T/C	ARHGAP1	intron	0.988	1.06332	0.0207	0.002939		7
rs12274785	11:46714279	T/C	ARHGAP1	intron	0.983	0.96416	0.0116	0.001641		5
rs12574259	11:46704439	A/G	ARHGAP1	intron	0.993	0.92265	0.0145	3.072E-8		4
rs142892685	11:46712104	A/G	ARHGAP1	intron	0.697	1.10296	0.0558	0.07919		-
rs143944946	11:46711101	T/C	ARHGAP1	intron	0.905	1.08091	0.0554	0.1602		-
rs148879999	11:46701863	A/G	ARHGAP1	intron	0.811	1.10893	0.0507	0.04138		-
rs4319473	11:46702691	A/G	ARHGAP1	intron	0.996	1.08080	0.0146	1.089E-7		5
rs4603265	11:46708196	T/C	ARHGAP1	intron	0.977	0.96986	0.0152	0.04375		7
rs4752927	11:46702160	T/C	ARHGAP1	intron	0.982	0.98187	0.0165	0.2688		5
rs61884297	11:46705974	A/T	ARHGAP1	intron	0.974	1.11706	0.0223	6.72E-7		4
rs72912170	11:46701108	A/G	ARHGAP1	intron	0.934	0.99870	0.0179	0.9417		5
rs72912175	11:46710111	A/G	ARHGAP1	intron	0.981	1.00552	0.0169	0.7422		7
rs72912177	11:46718663	T/C	ARHGAP1	intron	0.973	1.00572	0.0167	0.7332		6
rs74486166	11:46700203	C/G	ARHGAP1	untranslated-3	0.940	1.01928	0.0177	0.2809		4
rs78301405	11:46712123	T/G	ARHGAP1	intron	0.885	0.89012	0.0346	0.0007814		5
rs79443985	11:46710829	T/C	ARHGAP1	intron	0.994	0.92256	0.0145	3.048E-8		7
rs8914	11:46699124	A/G	ARHGAP1	untranslated-3	0.943	1.01888	0.0177	0.2909		5
rs9704782	11:46704106	T/G	ARHGAP1	intron	0.980	1.04394	0.0119	0.0003098		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information