ALMS1

Basic Information

Gene Symbol	ALMS1
Entrez Id	7840
Position	chr2:73612886..73837047
Description	Alstrom syndrome protein 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10169213	2:73787234	C/G	ALMS1	intron	1.000	1.06375	0.0129	1.614E-6		7
rs10169714	2:73808773	T/G	ALMS1	intron	1.000	0.93960	0.0129	1.34E-6		7
rs10170786	2:73812988	T/C	ALMS1	intron	1.000	1.06194	0.0127	2.354E-6		6
rs10170849	2:73747932	A/G	ALMS1	intron	1.000	1.06003	0.0128	4.888E-6		7
rs10173534	2:73813432	T/C	ALMS1	intron	1.000	1.06407	0.0129	1.456E-6		7
rs10175180	2:73673123	T/C	ALMS1	intron	1.000	1.06109	0.0127	3.204E-6		7
rs10178678	2:73762236	A/G	ALMS1	intron	0.996	0.93988	0.0130	1.831E-6		6
rs10179134	2:73637519	A/G	ALMS1	intron	0.998	0.93482	0.0130	2.125E-7		6
rs10181563	2:73796173	T/G	ALMS1	intron	0.987	1.06492	0.0131	1.614E-6		7
rs10183818	2:73714556	A/G	ALMS1	intron	0.997	0.93904	0.0130	1.21E-6		2b
rs10184268	2:73627044	T/C	ALMS1	intron	0.987	1.06492	0.0128	9.232E-7		7
rs10185080	2:73797507	A/C	ALMS1	intron	1.000	1.06173	0.0129	3.468E-6		6
rs10186501	2:73697844	T/C	ALMS1	intron	1.000	1.06173	0.0127	2.421E-6		7
rs10187192	2:73713500	T/C	ALMS1	intron	0.996	0.93876	0.0130	1.077E-6		7
rs10187416	2:73713741	T/G	ALMS1	intron	0.997	0.94167	0.0128	2.667E-6		7
rs10189574	2:73698518	A/C	ALMS1	intron	1.000	1.06046	0.0127	3.701E-6		7
rs10189578	2:73728609	A/C	ALMS1	intron	1.000	1.02953	0.0109	0.007873		6
rs10190002	2:73794054	T/C	ALMS1	intron	1.000	1.03417	0.0110	0.002164		6
rs10190219	2:73658331	T/C	ALMS1	intron	1.000	1.06524	0.0129	9.975E-7		5
rs10192125	2:73671229	A/G	ALMS1	intron	0.993	0.98079	0.0151	0.1987		7
rs10192708	2:73780541	A/T	ALMS1	intron	0.961	0.96638	0.0549	0.5331		7
rs10193972	2:73717656	A/G	ALMS1	missense	1.000	0.94176	0.0127	2.491E-6		6
rs10195357	2:73713029	A/G	ALMS1	intron	0.981	0.94045	0.0131	2.58E-6		7
rs10195358	2:73713030	A/G	ALMS1	intron	0.981	0.94054	0.0131	2.683E-6		6
rs10197409	2:73806414	T/C	ALMS1	intron	1.000	1.06131	0.0127	2.941E-6		6
rs10197755	2:73797623	A/T	ALMS1	intron	1.000	1.06173	0.0129	3.458E-6		6
rs10198549	2:73794404	A/G	ALMS1	intron	1.000	0.93951	0.0129	1.299E-6		7
rs10199224	2:73761446	C/G	ALMS1	intron	0.997	0.93951	0.0130	1.526E-6		6
rs10207220	2:73785046	C/G	ALMS1	intron	1.000	1.06375	0.0129	1.641E-6		5
rs10207264	2:73714097	A/G	ALMS1	intron	0.998	1.06205	0.0128	2.508E-6		5
rs10207970	2:73744875	C/G	ALMS1	intron	0.992	1.02255	0.0107	0.03778		7
rs10469966	2:73752368	A/G	ALMS1	intron	0.915	1.06748	0.0129	4.437E-7		7
rs10496190	2:73638823	C/G	ALMS1	intron	0.942	0.97531	0.0110	0.02258		6
rs10496191	2:73673798	T/C	ALMS1	intron	1.000	1.06120	0.0127	3.074E-6		6
rs10496192	2:73679866	T/C	ALMS1	missense	0.995	0.95667	0.0146	0.002337		7
rs10496193	2:73773503	A/G	ALMS1	intron	1.000	1.06173	0.0127	2.544E-6		5
rs10519309	2:73672629	T/C	ALMS1	intron	0.996	0.98472	0.0194	0.4284		7
rs1052161	2:73828538	A/G	ALMS1	missense	1.000	0.96793	0.0109	0.002882		6
rs1052162	2:73829372	T/C	ALMS1	coding-synon	1.000	1.06056	0.0127	3.766E-6		6
rs1083919	2:73713863	C/G	ALMS1	intron	1.000	1.03179	0.0109	0.004249		7
rs1083921	2:73712642	C/G	ALMS1	intron	0.989	1.03097	0.0110	0.005472		7
rs1083922	2:73704003	T/C	ALMS1	intron	1.000	1.03149	0.0109	0.004515		6
rs1083923	2:73703374	A/G	ALMS1	intron	1.000	1.03200	0.0109	0.003979		6
rs10865398	2:73741497	T/G	ALMS1	intron	1.000	1.03159	0.0109	0.004464		6
rs1091568	2:73714648	A/G	ALMS1	intron	0.993	0.97677	0.0151	0.1186		5
rs111256969	2:73777049	A/G	ALMS1	intron	0.715	1.00803	0.0390	0.8373		7
rs11126404	2:73796924	A/T	ALMS1	intron	0.966	1.06269	0.0132	4.191E-6		7
rs111344977	2:73837240	T/C	ALMS1	near-gene-3	0.697	1.00632	0.0361	0.8616		7
rs111541022	2:73744846	A/G	ALMS1	intron	0.804	1.16813	0.0363	0.00001838		6
rs111845822	2:73627310	A/G	ALMS1	intron	0.951	1.05327	0.0199	0.009106		7
rs112006497	2:73730530	T/C	ALMS1	intron	0.993	1.04446	0.0146	0.00295		6
rs112034360	2:73677548	A/G	ALMS1	coding-synon	0.988	0.91622	0.0228	0.000127		7
rs112269398	2:73814218	A/G	ALMS1	intron	0.991	0.97981	0.0150	0.1747		7
rs113054081	2:73629433	A/G	ALMS1	intron	0.988	1.09439	0.0229	0.00008252		7
rs113599503	2:73790633	A/T	ALMS1	intron	0.992	1.01959	0.0150	0.1955		6
rs114464802	2:73656239	T/C	ALMS1	intron	0.810	1.14901	0.0491	0.00468		7
rs114654900	2:73801107	A/G	ALMS1	intron	0.962	0.97677	0.0251	0.349		7
rs115516373	2:73797559	C/G	ALMS1	intron	0.828	1.15569	0.0459	0.001611		7
rs115539218	2:73695156	T/C	ALMS1	intron	0.933	1.04289	0.0274	0.125		6
rs115817471	2:73653835	A/G	ALMS1	intron	0.637	0.92570	0.0644	0.2311		7
rs115989148	2:73641844	C/G	ALMS1	intron	0.754	1.03946	0.0453	0.3931		5
rs116101033	2:73815324	A/G	ALMS1	intron	0.640	1.01005	0.0662	0.8805		5
rs116318106	2:73782415	A/G	ALMS1	intron	0.654	0.97181	0.0348	0.4109		6
rs11684858	2:73643627	T/G	ALMS1	intron	0.924	1.02552	0.0243	0.2996		7
rs11689588	2:73773691	A/G	ALMS1	intron	1.000	0.94007	0.0129	1.714E-6		5
rs11884776	2:73746923	T/C	ALMS1	coding-synon	1.000	1.06269	0.0129	2.573E-6		6
rs11893881	2:73824373	A/T	ALMS1	intron	1.000	1.06290	0.0129	2.251E-6		6
rs11899740	2:73631212	A/G	ALMS1	intron	0.994	1.06983	0.0131	2.365E-7		6
rs11899902	2:73631564	A/G	ALMS1	intron	0.999	1.06962	0.0130	2.164E-7		7
rs11901272	2:73720444	A/G	ALMS1	intron	0.975	0.94318	0.0128	5.262E-6		7
rs11903916	2:73815328	A/G	ALMS1	intron	1.000	1.06184	0.0127	2.477E-6		5
rs12104768	2:73674966	T/C	ALMS1	intron	0.988	0.91805	0.0228	0.0001791		6
rs1246092	2:73707995	T/C	ALMS1	intron	0.874	1.03603	0.0114	0.001833		7
rs1246093	2:73707985	T/C	ALMS1	intron	0.708	0.99392	0.0140	0.6605		7
rs1246095	2:73706885	A/G	ALMS1	intron	0.992	1.01990	0.0226	0.3834		6
rs1246105	2:73694160	T/G	ALMS1	intron	0.994	0.97785	0.0151	0.1388		7
rs12465867	2:73612102	T/C	ALMS1	near-gene-5	0.999	1.04928	0.0116	0.00003162		3a
rs12477496	2:73821335	A/G	ALMS1	intron	0.664	1.01664	0.0457	0.7182		6
rs12713782	2:73659734	A/G	ALMS1	intron	0.992	0.98324	0.0226	0.4533		7
rs12713783	2:73663481	A/C	ALMS1	intron	0.993	0.97893	0.0151	0.158		5
rs12995433	2:73641326	T/C	ALMS1	intron	0.994	0.96397	0.0110	0.0008757		7
rs12996463	2:73655496	T/C	ALMS1	intron	0.991	1.03221	0.0110	0.003983		6
rs13008860	2:73774019	A/G	ALMS1	intron	0.994	1.02143	0.0107	0.04801		6
rs13383871	2:73631779	T/C	ALMS1	intron	0.997	0.93445	0.0130	1.876E-7		7
rs13384952	2:73723959	A/G	ALMS1	intron	1.000	0.93941	0.0129	1.244E-6		6
rs13386124	2:73771695	C/G	ALMS1	intron	1.000	1.03159	0.0109	0.00432		6
rs13391552	2:73818936	A/G	ALMS1	intron	1.000	1.06184	0.0129	3.378E-6		6
rs13392691	2:73748980	A/G	ALMS1	intron	1.000	1.06226	0.0129	3.119E-6		7
rs13392872	2:73713072	A/G	ALMS1	intron	0.988	1.06663	0.0131	8.646E-7		6
rs13398956	2:73720258	A/C	ALMS1	intron	1.000	1.06439	0.0129	1.321E-6		6
rs13399087	2:73771386	T/C	ALMS1	intron	0.995	0.96967	0.0109	0.004903		6
rs13400985	2:73733071	A/G	ALMS1	intron	0.992	0.93894	0.0129	1.048E-6		7
rs13409668	2:73753187	T/C	ALMS1	intron	1.000	1.05940	0.0128	6.228E-6		7
rs13421462	2:73719875	A/C	ALMS1	intron	1.000	0.93932	0.0129	1.257E-6		6
rs13428235	2:73633430	A/G	ALMS1	intron	0.999	1.06962	0.0130	2.208E-7		7
rs13431267	2:73782200	A/G	ALMS1	intron	0.985	0.94092	0.0130	2.693E-6		6
rs13432605	2:73810981	C/G	ALMS1	intron	1.000	0.93960	0.0129	1.319E-6		6
rs138634444	2:73830974	A/G	ALMS1	intron	0.883	1.03800	0.0318	0.2408		-
rs138978407	2:73691775	C/G	ALMS1	intron	0.995	1.03087	0.0110	0.005841		-
rs139071816	2:73767129	A/G	ALMS1	intron	0.889	1.06641	0.0511	0.2081		-
rs139416352	2:73704126	A/G	ALMS1	intron	0.746	1.02255	0.0561	0.6912		-
rs140224167	2:73765906	T/G	ALMS1	intron	0.828	1.15373	0.0457	0.001747		-
rs140886561	2:73690300	T/C	ALMS1	intron	0.971	0.96503	0.0259	0.1681		-
rs141764984	2:73690491	A/C	ALMS1	intron	0.994	0.96841	0.0110	0.003362		-
rs142209924	2:73733673	A/G	ALMS1	intron	0.990	1.09297	0.0229	0.0001007		-
rs142575229	2:73666876	T/C	ALMS1	intron	0.742	1.06162	0.0435	0.1696		-
rs142710146	2:73622182	A/G	ALMS1	intron	0.609	0.92164	0.0306	0.007614		-
rs142800387	2:73693466	A/G	ALMS1	intron	0.968	1.02973	0.0110	0.007826		-
rs143434528	2:73690039	T/C	ALMS1	intron	0.820	0.98295	0.0144	0.2334		-
rs144788670	2:73691524	C/G	ALMS1	intron	0.969	0.93885	0.0130	1.322E-6		-
rs145017004	2:73690467	A/C	ALMS1	intron	0.998	0.96831	0.0109	0.003174		-
rs145571326	2:73652316	A/T	ALMS1	intron	0.795	0.94630	0.0436	0.2062		-
rs146652964	2:73758339	A/C	ALMS1	intron	0.968	0.95209	0.0482	0.3088		-
rs146672754	2:73765880	A/G	ALMS1	intron	0.912	0.97961	0.0228	0.3659		-
rs146698823	2:73771268	A/T	ALMS1	intron	0.990	1.01542	0.0227	0.502		-
rs147356858	2:73785885	A/G	ALMS1	intron	0.827	1.15627	0.0457	0.001493		-
rs148570207	2:73764968	A/T	ALMS1	intron	0.878	0.95266	0.0542	0.3711		-
rs149526616	2:73812090	T/C	ALMS1	intron	0.952	0.98305	0.0256	0.5041		-
rs149839293	2:73645998	A/G	ALMS1	intron	0.893	1.05243	0.0518	0.3236		-
rs150017488	2:73752613	T/G	ALMS1	intron	0.646	0.91769	0.0664	0.1957		-
rs150167456	2:73690820	T/C	ALMS1	intron	0.676	1.01207	0.0136	0.3777		-
rs150526913	2:73617984	T/C	ALMS1	intron	0.659	0.98531	0.0354	0.6755		-
rs151003386	2:73622184	A/G	ALMS1	intron	0.640	0.93342	0.0244	0.004821		-
rs1528169	2:73669186	T/C	ALMS1	intron	1.000	1.03252	0.0109	0.003446		6
rs1534471	2:73647508	A/G	ALMS1	intron	0.990	1.06194	0.0128	2.444E-6		7
rs1589576	2:73738804	A/G	ALMS1	intron	0.996	0.95772	0.0145	0.00294		6
rs17009149	2:73790368	T/C	ALMS1	intron	1.000	0.93988	0.0129	1.519E-6		6
rs17009159	2:73797762	A/T	ALMS1	intron	1.000	0.94016	0.0129	1.659E-6		7
rs17349321	2:73643753	T/C	ALMS1	intron	0.994	1.04739	0.0147	0.001627		7
rs17349685	2:73744123	A/G	ALMS1	intron	0.935	1.02583	0.0253	0.3143		7
rs17349804	2:73783160	A/T	ALMS1	intron	0.989	1.02132	0.0150	0.1588		7
rs17349818	2:73792207	A/G	ALMS1	intron	0.927	0.94299	0.0256	0.02153		5
rs17349853	2:73831714	T/G	ALMS1	intron	0.689	0.96493	0.0239	0.1351		6
rs17434013	2:73659456	T/C	ALMS1	intron	0.695	1.04959	0.0330	0.1423		7
rs181662420	2:73801634	A/T	ALMS1	intron	0.945	0.90132	0.0244	0.00002102		-
rs188340015	2:73712033	C/G	ALMS1	intron	0.616	1.07433	0.0677	0.29		-
rs188980910	2:73771070	T/G	ALMS1	intron	0.629	0.94092	0.0641	0.342		-
rs189551535	2:73688145	T/C	ALMS1	intron	0.770	1.03717	0.0403	0.3655		-
rs189756023	2:73672108	A/G	ALMS1	intron	0.652	0.96041	0.0602	0.5024		-
rs192488536	2:73772839	A/G	ALMS1	intron	0.889	1.06663	0.0511	0.2068		-
rs192985159	2:73832048	T/C	ALMS1	intron	0.876	0.97239	0.0649	0.6663		-
rs193095150	2:73768043	A/G	ALMS1	intron	0.649	0.90747	0.0751	0.1958		-
rs2037814	2:73675669	T/G	ALMS1	missense	0.994	0.97971	0.0151	0.1751		7
rs2056486	2:73717567	T/G	ALMS1	missense	1.000	1.06184	0.0127	2.426E-6		7
rs2091502	2:73688092	T/C	ALMS1	intron	0.851	0.98206	0.0214	0.3991		7
rs2091503	2:73687865	A/G	ALMS1	intron	0.991	1.03149	0.0109	0.004423		7
rs2091504	2:73687794	T/G	ALMS1	intron	1.000	0.96851	0.0109	0.003353		6
rs2140195	2:73702344	A/G	ALMS1	intron	1.000	0.94271	0.0127	3.608E-6		7
rs2178154	2:73661738	T/C	ALMS1	intron	1.000	0.96754	0.0110	0.002668		7
rs2421545	2:73639476	T/C	ALMS1	intron	0.997	1.03707	0.0110	0.0009548		6
rs2421546	2:73641077	A/C	ALMS1	intron	0.999	1.03490	0.0109	0.001752		7
rs2421547	2:73641088	T/G	ALMS1	intron	0.974	0.98679	0.0224	0.5543		6
rs2421548	2:73641240	A/G	ALMS1	intron	0.998	1.03676	0.0110	0.001023		7
rs2421549	2:73658573	T/C	ALMS1	intron	0.972	0.98246	0.0224	0.4304		7
rs2421550	2:73658686	A/G	ALMS1	intron	0.991	0.94158	0.0127	2.31E-6		7
rs2421552	2:73758803	T/C	ALMS1	intron	0.996	1.06439	0.0130	1.53E-6		7
rs2421555	2:73816955	A/G	ALMS1	intron	1.000	1.06120	0.0127	3E-6		6
rs2421667	2:73832459	T/C	ALMS1	intron	1.000	1.03448	0.0110	0.00197		6
rs2461691	2:73712962	T/C	ALMS1	intron	0.937	0.98157	0.0148	0.2111		6
rs28574733	2:73693626	C/G	ALMS1	intron	0.725	0.97181	0.0124	0.02136		6
rs28730854	2:73679956	T/C	ALMS1	missense	0.841	1.06727	0.0308	0.03476		7
rs28879089	2:73812886	A/G	ALMS1	intron	0.999	1.06460	0.0129	1.218E-6		7
rs2901438	2:73665656	A/G	ALMS1	intron	1.000	1.06152	0.0127	2.724E-6		7
rs2948441	2:73825770	A/G	ALMS1	intron	0.992	0.97893	0.0151	0.1576		6
rs2950770	2:73712951	A/G	ALMS1	intron	0.980	1.02163	0.0151	0.1558		6
rs34032338	2:73762385	A/G	ALMS1	intron	0.848	0.95810	0.0241	0.07531		6
rs34142813	2:73708783	A/G	ALMS1	intron	0.793	1.08861	0.0173	9.788E-7		7
rs35062203	2:73717921	C/G	ALMS1	missense	0.970	1.05085	0.0482	0.3032		7
rs35273932	2:73739848	T/G	ALMS1	intron	0.901	0.92349	0.0518	0.1241		7
rs35885918	2:73612234	T/C	ALMS1	near-gene-5	0.999	0.95304	0.0116	0.00003152		3a
rs3813227	2:73651967	T/C	ALMS1	missense	0.991	1.05982	0.0127	4.851E-6		6
rs3820700	2:73716810	A/G	ALMS1	missense	0.994	0.97863	0.0151	0.1525		6
rs4500972	2:73767897	A/G	ALMS1	intron	0.937	1.06099	0.0136	0.00001385		6
rs45501594	2:73799632	C/G	ALMS1	missense	0.933	1.07423	0.0569	0.2082		7
rs45608038	2:73679013	A/G	ALMS1	missense	0.616	0.94035	0.0635	0.3333		4
rs4852305	2:73649733	T/G	ALMS1	intron	0.975	0.97492	0.0154	0.09851		7
rs4852306	2:73688784	T/C	ALMS1	intron	0.989	0.96957	0.0109	0.004626		7
rs4852308	2:73834035	T/G	ALMS1	intron	1.000	1.03334	0.0109	0.002676		6
rs4852927	2:73641557	T/C	ALMS1	intron	0.989	0.96368	0.0111	0.0008299		6
rs4852930	2:73688318	C/G	ALMS1	intron	0.836	0.97190	0.0115	0.01351		6
rs4852931	2:73688343	A/G	ALMS1	intron	0.773	0.97785	0.0140	0.1094		7
rs4852936	2:73831358	T/C	ALMS1	intron	0.987	1.01888	0.0150	0.2106		6
rs4852937	2:73834084	T/C	ALMS1	intron	0.990	1.02102	0.0148	0.1606		6
rs58242989	2:73696617	A/G	ALMS1	intron	0.611	1.07219	0.0243	0.004201		7
rs58603761	2:73726605	A/G	ALMS1	intron	1.000	0.94261	0.0127	3.386E-6		7
rs60844734	2:73623205	A/T	ALMS1	intron	0.999	1.06940	0.0130	2.418E-7		7
rs61388780	2:73669235	A/G	ALMS1	intron	0.833	0.94914	0.0268	0.0517		6
rs62149774	2:73787652	A/G	ALMS1	intron	0.995	1.04467	0.0146	0.002743		7
rs62149777	2:73795364	A/G	ALMS1	intron	0.992	1.04456	0.0146	0.002827		6
rs62149779	2:73808307	A/G	ALMS1	intron	0.901	0.98187	0.0242	0.4501		6
rs62149780	2:73811343	C/G	ALMS1	intron	0.901	0.98157	0.0242	0.4425		6
rs62149781	2:73812623	A/C	ALMS1	intron	0.987	0.93763	0.0131	8.209E-7		7
rs62149782	2:73819028	C/G	ALMS1	intron	0.972	1.04050	0.0146	0.006331		6
rs62149784	2:73824410	T/C	ALMS1	intron	0.854	0.93090	0.0382	0.06085		7
rs62149804	2:73837006	A/T	ALMS1	untranslated-3	0.965	1.04812	0.0145	0.001175		6
rs62151564	2:73615449	A/G	ALMS1	intron	0.993	0.95180	0.0148	0.0008012		6
rs62151604	2:73657446	T/C	ALMS1	intron	0.987	1.04603	0.0147	0.002219		7
rs62151609	2:73679117	A/G	ALMS1	coding-synon	0.959	1.12727	0.0546	0.02826		5
rs62151652	2:73700131	A/C	ALMS1	intron	1.000	0.93988	0.0129	1.502E-6		7
rs62153182	2:73748845	C/G	ALMS1	intron	0.995	0.95925	0.0147	0.004554		6
rs62153183	2:73763366	A/G	ALMS1	intron	0.995	0.95724	0.0146	0.00281		7
rs62153184	2:73773869	C/G	ALMS1	intron	1.000	1.03303	0.0109	0.002954		7
rs6546829	2:73613789	C/G	ALMS1	intron	0.995	0.95332	0.0116	0.00003672		4
rs6546830	2:73635304	C/G	ALMS1	intron	0.987	0.97795	0.0148	0.1308		7
rs6546831	2:73642072	A/T	ALMS1	intron	0.989	1.02102	0.0150	0.1666		5
rs6546832	2:73649352	A/G	ALMS1	intron	0.989	0.98020	0.0151	0.1865		6
rs6546833	2:73661849	T/C	ALMS1	intron	0.965	1.02153	0.0151	0.1571		7
rs6546834	2:73662087	A/G	ALMS1	intron	0.992	0.98020	0.0151	0.1857		6
rs6546835	2:73664715	A/G	ALMS1	intron	1.000	1.06184	0.0128	2.591E-6		7
rs6546836	2:73677833	A/G	ALMS1	coding-synon	1.000	0.94045	0.0127	1.447E-6		7
rs6546837	2:73677898	C/G	ALMS1	missense	1.000	1.06141	0.0127	2.767E-6		6
rs6546838	2:73679280	A/G	ALMS1	missense	1.000	0.94111	0.0127	1.736E-6		7
rs6546839	2:73680508	C/G	ALMS1	missense	1.000	1.06099	0.0127	3.122E-6		7
rs6546842	2:73736957	C/G	ALMS1	intron	0.991	1.02245	0.0151	0.1408		7
rs6546845	2:73770077	T/G	ALMS1	intron	0.996	0.94233	0.0128	3.185E-6		6
rs6546846	2:73770162	A/C	ALMS1	intron	0.987	0.96406	0.0111	0.0009201		7
rs6546847	2:73785358	A/G	ALMS1	intron	1.000	0.94205	0.0127	2.587E-6		5
rs6546849	2:73831037	A/G	ALMS1	intron	0.998	0.94280	0.0127	3.555E-6		7
rs6546850	2:73831147	A/T	ALMS1	intron	1.000	0.94261	0.0127	3.372E-6		7
rs6546851	2:73833283	T/C	ALMS1	intron	1.000	1.06078	0.0127	3.407E-6		6
rs6546852	2:73833431	A/G	ALMS1	intron	1.000	1.06078	0.0127	3.483E-6		7
rs6546853	2:73833739	A/G	ALMS1	intron	1.000	1.06078	0.0127	3.489E-6		7
rs6546854	2:73834034	A/G	ALMS1	intron	1.000	0.94064	0.0129	2.005E-6		6
rs66931335	2:73773933	A/G	ALMS1	intron	0.988	0.98059	0.0150	0.1917		6
rs6704782	2:73766454	A/T	ALMS1	intron	0.995	0.93894	0.0130	1.239E-6		7
rs6706235	2:73613558	C/G	ALMS1	intron	0.998	0.95332	0.0116	0.00003579		4
rs6708766	2:73737204	A/T	ALMS1	intron	0.995	0.93913	0.0130	1.287E-6		7
rs6710438	2:73820108	C/G	ALMS1	intron	1.000	1.06173	0.0129	3.451E-6		6
rs6729468	2:73765253	A/C	ALMS1	intron	1.000	1.03303	0.0109	0.002875		5
rs6732440	2:73827099	T/G	ALMS1	intron	1.000	1.03345	0.0110	0.002689		6
rs6740223	2:73653332	T/C	ALMS1	intron	0.991	0.94290	0.0127	3.836E-6		5
rs6741067	2:73623882	T/C	ALMS1	intron	0.961	0.93622	0.0129	3.604E-7		7
rs6744697	2:73765438	T/C	ALMS1	intron	1.000	0.96831	0.0109	0.003217		6
rs6746458	2:73665866	T/C	ALMS1	intron	0.993	0.97883	0.0151	0.1557		6
rs6746971	2:73669462	T/C	ALMS1	intron	1.000	0.96764	0.0110	0.002763		6
rs6753344	2:73653138	A/G	ALMS1	intron	1.000	0.94026	0.0129	1.772E-6		6
rs6755217	2:73641285	T/C	ALMS1	intron	0.999	1.06759	0.0130	4.665E-7		6
rs6755241	2:73641364	T/C	ALMS1	intron	0.999	1.06801	0.0130	3.956E-7		7
rs6756885	2:73805172	A/G	ALMS1	intron	1.000	0.93969	0.0129	1.368E-6		7
rs6757996	2:73772251	A/G	ALMS1	intron	1.000	1.03376	0.0110	0.002483		7
rs67877078	2:73795641	T/C	ALMS1	intron	0.992	0.98079	0.0150	0.1974		7
rs67898050	2:73743010	T/C	ALMS1	intron	0.992	1.02214	0.0151	0.147		7
rs68154245	2:73743715	T/C	ALMS1	intron	0.992	0.97853	0.0151	0.1497		7
rs72809998	2:73628938	A/C	ALMS1	intron	0.627	1.01187	0.0184	0.5205		7
rs72811904	2:73645863	A/G	ALMS1	intron	0.621	1.08926	0.0240	0.0003654		5
rs72811907	2:73649567	T/G	ALMS1	intron	0.994	0.98393	0.0194	0.4048		7
rs72811908	2:73649661	A/G	ALMS1	intron	0.970	0.96532	0.0258	0.1714		7
rs72811918	2:73694905	T/G	ALMS1	intron	0.971	0.96522	0.0259	0.1707		7
rs72811931	2:73730083	A/C	ALMS1	intron	0.964	0.96647	0.0256	0.1837		6
rs72811937	2:73747574	A/T	ALMS1	intron	0.936	1.03210	0.0336	0.3476		7
rs72811939	2:73764457	T/C	ALMS1	intron	0.991	0.98010	0.0151	0.1817		7
rs72811946	2:73787971	T/C	ALMS1	intron	0.962	0.96754	0.0256	0.1988		7
rs73947808	2:73721250	A/C	ALMS1	intron	0.999	0.93979	0.0129	1.602E-6		2b
rs7424690	2:73806632	T/C	ALMS1	intron	0.995	0.94214	0.0131	5.146E-6		6
rs74482088	2:73770087	A/G	ALMS1	intron	0.935	0.98246	0.0155	0.2538		7
rs74523560	2:73764185	T/C	ALMS1	intron	0.989	1.04456	0.0147	0.00311		7
rs75084991	2:73726925	A/G	ALMS1	intron	0.744	0.94422	0.0579	0.321		5
rs75113442	2:73726701	A/G	ALMS1	intron	0.990	1.09363	0.0228	0.00008854		7
rs75274824	2:73797365	T/C	ALMS1	intron	0.980	0.98531	0.0195	0.4485		7
rs7572722	2:73724675	T/C	ALMS1	intron	1.000	0.93941	0.0129	1.274E-6		6
rs75844284	2:73696511	A/G	ALMS1	intron	0.933	0.95887	0.0274	0.1256		7
rs7585119	2:73724679	A/T	ALMS1	intron	1.000	0.96967	0.0109	0.004842		6
rs7588169	2:73732096	C/G	ALMS1	intron	1.000	1.06162	0.0128	2.711E-6		7
rs7594511	2:73681639	A/G	ALMS1	intron	1.000	0.93979	0.0129	1.39E-6		6
rs7598660	2:73740425	A/G	ALMS1	intron	0.995	1.02153	0.0107	0.04684		6
rs7603647	2:73817238	A/G	ALMS1	intron	1.000	1.06258	0.0129	2.601E-6		6
rs7606483	2:73735674	A/G	ALMS1	intron	0.987	0.96657	0.0111	0.002117		7
rs76142205	2:73729642	T/C	ALMS1	intron	0.990	0.91530	0.0228	0.0001069		6
rs76224397	2:73818790	A/C	ALMS1	intron	0.898	1.01106	0.0576	0.8479		6
rs76234639	2:73692652	T/C	ALMS1	intron	0.990	0.97775	0.0151	0.1366		7
rs76363434	2:73615752	C/G	ALMS1	intron	0.659	1.01501	0.0354	0.6743		6
rs77690987	2:73628772	A/G	ALMS1	intron	0.631	1.20286	0.0548	0.0007518		6
rs780390	2:73714933	T/C	ALMS1	intron	0.981	0.97814	0.0150	0.1402		6
rs78339407	2:73691144	A/C	ALMS1	intron	0.992	0.97035	0.0109	0.005778		7
rs78425445	2:73793425	A/G	ALMS1	intron	0.991	1.01857	0.0225	0.4144		7
rs78492200	2:73768232	T/G	ALMS1	intron	1.000	0.94129	0.0128	2.104E-6		7
rs78984387	2:73628643	A/G	ALMS1	intron	0.876	0.97190	0.0350	0.4155		6
rs79799178	2:73791235	A/G	ALMS1	intron	0.995	0.95695	0.0146	0.002572		6
rs9309473	2:73743982	A/G	ALMS1	intron	1.000	0.93979	0.0129	1.511E-6		6
rs9653557	2:73795962	A/C	ALMS1	intron	1.000	0.94007	0.0129	1.634E-6		6
rs9749859	2:73811908	C/G	ALMS1	intron	0.994	1.06269	0.0127	1.826E-6		6
rs9750915	2:73811880	T/C	ALMS1	intron	1.000	0.93951	0.0129	1.288E-6		7
rs9753079	2:73733313	T/C	ALMS1	intron	0.942	1.06524	0.0137	3.921E-6		7
rs9807961	2:73694043	A/G	ALMS1	intron	0.999	0.94214	0.0127	2.93E-6		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information