AFAP1L1

Basic Information

Gene Symbol	AFAP1L1
Entrez Id	134265
Position	chr5:148651401..148721368
Description	actin filament associated protein 1-like 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10039849	5:148665598	T/C	AFAP1L1	intron	0.988	1.01076	0.0372	0.7735		7
rs10040292	5:148701339	T/C	AFAP1L1	intron	0.867	1.01826	0.0473	0.7024		6
rs10040627	5:148667320	T/G	AFAP1L1	intron	0.979	0.98541	0.0368	0.6899		6
rs10058380	5:148689959	A/G	AFAP1L1	intron	0.947	1.01005	0.0208	0.6296		7
rs10062080	5:148660697	T/C	AFAP1L1	intron	0.914	0.99740	0.0111	0.8143		7
rs10065435	5:148684169	C/G	AFAP1L1	intron	0.870	0.97834	0.0156	0.1614		5
rs10072778	5:148696042	T/C	AFAP1L1	intron	0.947	1.01867	0.0195	0.3436		7
rs10079672	5:148696383	A/G	AFAP1L1	intron	0.887	0.99830	0.0156	0.9123		7
rs10477412	5:148661497	T/G	AFAP1L1	intron	0.752	1.04498	0.0371	0.2358		6
rs10477414	5:148665316	T/C	AFAP1L1	intron	0.936	0.99154	0.0241	0.7255		7
rs10477415	5:148719241	T/C	AFAP1L1	intron	0.993	0.97317	0.0114	0.01709		6
rs10515626	5:148700714	A/G	AFAP1L1	intron	0.881	1.03376	0.0119	0.005286		4
rs111580445	5:148711219	T/C	AFAP1L1	intron	0.910	0.99144	0.0279	0.7583		7
rs11168097	5:148700471	T/C	AFAP1L1	intron	0.913	0.96889	0.0204	0.1218		4
rs112651316	5:148692547	A/G	AFAP1L1	intron	0.935	1.02030	0.0200	0.314		6
rs112974166	5:148662633	A/G	AFAP1L1	intron	0.854	1.00030	0.0319	0.9925		5
rs113175693	5:148718969	A/T	AFAP1L1	intron	0.686	0.99710	0.0339	0.9308		7
rs113348864	5:148663819	A/G	AFAP1L1	intron	0.931	1.00371	0.0318	0.9069		5
rs113879126	5:148674959	T/G	AFAP1L1	intron	0.750	0.97064	0.0529	0.5728		2b
rs113968517	5:148700401	A/G	AFAP1L1	intron	0.793	0.96483	0.0406	0.3773		4
rs114429064	5:148705660	T/C	AFAP1L1	intron	0.685	0.97249	0.0588	0.6353		5
rs114517310	5:148656452	A/G	AFAP1L1	intron,ncRNA	0.888	1.10783	0.0578	0.0762		6
rs114880121	5:148709862	C/G	AFAP1L1	intron	0.830	1.01066	0.0558	0.8492		7
rs115059574	5:148657103	C/G	AFAP1L1	intron,near-gene-5	0.889	1.10783	0.0578	0.07633		7
rs115367290	5:148700817	T/G	AFAP1L1	intron	0.821	0.96967	0.0645	0.633		4
rs115512500	5:148664190	A/G	AFAP1L1	intron	0.939	0.98857	0.0242	0.6359		4
rs115870011	5:148684117	A/G	AFAP1L1	intron	0.726	0.98511	0.0488	0.7579		5
rs116494556	5:148673381	A/G	AFAP1L1	intron	0.949	0.99025	0.0241	0.6856		7
rs116696317	5:148693333	C/G	AFAP1L1	intron	0.793	1.00381	0.0489	0.9382		7
rs11954165	5:148659148	T/G	AFAP1L1	intron	0.957	0.97521	0.0238	0.29		5
rs12657199	5:148656926	T/G	AFAP1L1	intron,near-gene-5	0.953	1.02450	0.0110	0.02847		7
rs13361800	5:148665173	C/G	AFAP1L1	intron	0.984	0.96031	0.0164	0.01365		5
rs1353657	5:148671286	T/C	AFAP1L1	intron	0.986	0.95113	0.0182	0.005959		6
rs1353658	5:148671444	A/G	AFAP1L1	intron	0.986	1.05075	0.0182	0.006629		7
rs1353659	5:148671483	A/T	AFAP1L1	intron	0.986	0.95171	0.0182	0.006622		6
rs138999351	5:148714894	T/C	AFAP1L1	intron	0.753	0.97395	0.0563	0.6391		-
rs139435460	5:148692582	T/C	AFAP1L1	intron	0.794	1.02696	0.0402	0.5078		-
rs140983128	5:148693743	T/G	AFAP1L1	intron	0.843	1.02316	0.0627	0.7142		-
rs141310217	5:148667188	T/C	AFAP1L1	intron	0.979	1.01420	0.0370	0.7024		-
rs145206870	5:148672294	A/G	AFAP1L1	intron	0.948	1.00995	0.0241	0.6813		-
rs146135500	5:148710797	T/C	AFAP1L1	intron	0.776	1.01633	0.0613	0.7913		-
rs146582599	5:148700082	C/G	AFAP1L1	intron	0.738	0.93529	0.0449	0.1365		-
rs149689538	5:148671044	A/G	AFAP1L1	intron	0.656	0.99840	0.0319	0.9604		-
rs1617849	5:148672177	T/C	AFAP1L1	intron	0.978	0.96812	0.0142	0.02257		7
rs1621028	5:148671854	A/G	AFAP1L1	intron	0.978	1.03303	0.0142	0.02202		4
rs1621136	5:148671814	A/G	AFAP1L1	intron	0.917	0.96156	0.0176	0.02569		3a
rs1623904	5:148668174	T/C	AFAP1L1	intron	0.996	1.04039	0.0165	0.01649		2b
rs1659087	5:148719044	T/G	AFAP1L1	intron	0.980	0.97365	0.0107	0.01239		7
rs1659091	5:148675225	A/G	AFAP1L1	intron	0.972	1.03925	0.0154	0.01249		6
rs1659093	5:148672506	T/G	AFAP1L1	intron	0.985	0.95142	0.0182	0.006304		6
rs1659095	5:148671003	T/C	AFAP1L1	intron	0.969	0.95390	0.0182	0.009472		7
rs1659097	5:148670371	T/C	AFAP1L1	intron	0.986	0.95199	0.0182	0.006917		5
rs1659098	5:148669662	A/G	AFAP1L1	intron	0.989	0.95993	0.0166	0.01345		7
rs1659099	5:148669032	C/G	AFAP1L1	intron	0.993	1.03977	0.0166	0.01846		2b
rs1659112	5:148695004	T/C	AFAP1L1	intron	0.897	1.00361	0.0138	0.7954		7
rs1659114	5:148691112	T/C	AFAP1L1	intron	0.797	0.97453	0.0248	0.2984		5
rs1659117	5:148716422	A/G	AFAP1L1	intron	0.979	0.97287	0.0107	0.01005		4
rs1693900	5:148670450	A/C	AFAP1L1	intron	0.978	1.03303	0.0142	0.02205		5
rs1693901	5:148670955	T/G	AFAP1L1	intron	0.954	0.95209	0.0181	0.006831		6
rs1693903	5:148672339	A/G	AFAP1L1	intron	0.986	1.05106	0.0182	0.006283		7
rs1693905	5:148672870	T/C	AFAP1L1	intron	0.988	1.07724	0.0216	0.0005853		5
rs17109884	5:148656827	T/C	AFAP1L1	intron,near-gene-5	0.852	0.98955	0.0387	0.7869		7
rs17109887	5:148657148	T/C	AFAP1L1	intron,near-gene-5	0.953	1.02327	0.0239	0.3355		7
rs17109893	5:148658759	A/G	AFAP1L1	intron	0.954	1.02398	0.0238	0.3209		7
rs17109937	5:148690916	T/C	AFAP1L1	intron	0.899	0.97326	0.0457	0.5528		2b
rs17109939	5:148694417	T/C	AFAP1L1	intron	0.914	0.99025	0.0439	0.8236		3a
rs17642472	5:148683087	A/G	AFAP1L1	intron	0.980	0.99094	0.0218	0.677		7
rs17642570	5:148699825	T/C	AFAP1L1	intron	0.628	0.99154	0.0367	0.8161		5
rs17642594	5:148699951	T/C	AFAP1L1	intron	0.924	1.03262	0.0202	0.1128		6
rs17709557	5:148660166	T/C	AFAP1L1	intron	0.931	1.05591	0.0188	0.003839		5
rs17723143	5:148662635	C/G	AFAP1L1	intron	0.967	0.92830	0.0215	0.0005433		5
rs17854053	5:148687152	A/G	AFAP1L1	coding-synon	0.901	0.95552	0.0270	0.09286		4
rs1971311	5:148691551	T/C	AFAP1L1	intron	0.898	1.00361	0.0133	0.7852		6
rs2270682	5:148712150	A/G	AFAP1L1	intron	0.994	0.97404	0.0114	0.02095		7
rs2400856	5:148718774	T/C	AFAP1L1	intron	0.985	0.97171	0.0114	0.01191		7
rs2438491	5:148694097	T/C	AFAP1L1	intron	0.903	1.00331	0.0137	0.8076		6
rs2438492	5:148670764	T/C	AFAP1L1	intron	0.986	0.95218	0.0182	0.007195		7
rs2454101	5:148701155	A/G	AFAP1L1	intron	0.852	0.99253	0.0170	0.6597		7
rs3098389	5:148713163	C/G	AFAP1L1	intron	0.978	1.02819	0.0107	0.00932		5
rs3104351	5:148711060	A/G	AFAP1L1	intron	0.984	0.99780	0.0146	0.8824		7
rs34110934	5:148689393	A/G	AFAP1L1	intron	0.797	0.99173	0.0251	0.7421		7
rs34157183	5:148685014	A/T	AFAP1L1	intron	0.808	1.01562	0.0250	0.5357		6
rs34274338	5:148683424	C/G	AFAP1L1	intron	0.797	1.01359	0.0246	0.5829		6
rs34618588	5:148689735	T/C	AFAP1L1	intron	0.768	0.99890	0.0249	0.9655		6
rs34960718	5:148689083	T/C	AFAP1L1	intron	0.802	0.98600	0.0235	0.5487		5
rs352354	5:148666133	T/C	AFAP1L1	intron	0.994	0.92654	0.0215	0.0004013		6
rs352355	5:148665430	T/C	AFAP1L1	intron	0.988	1.04102	0.0164	0.01422		7
rs352357	5:148664244	A/G	AFAP1L1	intron	0.966	1.00854	0.0372	0.8202		4
rs4705069	5:148708184	A/C	AFAP1L1	intron	0.873	1.03025	0.0133	0.02491		6
rs4705070	5:148712773	A/G	AFAP1L1	intron	0.883	1.16591	0.0671	0.02207		7
rs61685134	5:148697853	T/C	AFAP1L1	intron	0.935	0.96986	0.0211	0.1478		7
rs61734415	5:148680717	A/G	AFAP1L1	missense	0.772	0.98000	0.0282	0.4738		5
rs62378115	5:148661797	T/C	AFAP1L1	intron	0.657	1.05792	0.0401	0.1606		5
rs62378116	5:148686639	A/G	AFAP1L1	intron	0.902	1.04676	0.0270	0.09087		6
rs62378118	5:148695163	T/C	AFAP1L1	intron	0.946	0.97785	0.0208	0.2817		6
rs62378119	5:148697699	T/G	AFAP1L1	intron	0.920	0.96977	0.0211	0.1447		7
rs62378136	5:148707405	A/C	AFAP1L1	intron	0.832	1.01562	0.0207	0.455		6
rs62378137	5:148716380	T/C	AFAP1L1	intron	0.829	0.98118	0.0205	0.3529		4
rs6866589	5:148709878	A/T	AFAP1L1	intron	0.905	1.00813	0.0135	0.552		6
rs6889207	5:148693461	A/G	AFAP1L1	intron	0.906	1.01278	0.0439	0.773		7
rs72837099	5:148685302	A/G	AFAP1L1	intron	0.657	0.99910	0.0321	0.9771		7
rs72838703	5:148690914	T/C	AFAP1L1	intron	0.853	0.98590	0.0235	0.5461		2b
rs72838706	5:148717379	A/G	AFAP1L1	intron	0.909	1.00833	0.0135	0.5393		5
rs7378629	5:148670886	T/C	AFAP1L1	intron	0.969	1.04928	0.0181	0.007949		7
rs75428315	5:148708269	T/C	AFAP1L1	intron	0.822	0.97785	0.0236	0.3431		7
rs75450541	5:148658361	T/C	AFAP1L1	intron,near-gene-5	0.902	0.95495	0.0436	0.2908		7
rs75968042	5:148682664	A/G	AFAP1L1	intron	0.654	0.99870	0.0407	0.974		6
rs76342189	5:148718228	T/C	AFAP1L1	intron	0.835	0.98590	0.0556	0.7987		5
rs76471671	5:148667469	T/G	AFAP1L1	intron	0.958	1.00965	0.0319	0.7636		7
rs77005424	5:148680020	A/T	AFAP1L1	intron	0.942	1.00844	0.0226	0.712		6
rs77382120	5:148672184	A/C	AFAP1L1	intron	0.975	1.01684	0.0370	0.6524		7
rs77509940	5:148659001	A/G	AFAP1L1	intron	0.896	1.10661	0.0581	0.08135		7
rs78064730	5:148705201	T/C	AFAP1L1	intron	0.640	0.97375	0.0498	0.5934		5
rs78117649	5:148663748	C/G	AFAP1L1	intron	0.937	0.98936	0.0242	0.658		5
rs78790270	5:148657546	C/G	AFAP1L1	intron,near-gene-5	0.931	1.06354	0.0406	0.1292		5
rs78883610	5:148692604	T/C	AFAP1L1	intron	0.900	1.01928	0.0199	0.3366		7
rs79617252	5:148664554	T/G	AFAP1L1	intron	0.940	1.01096	0.0242	0.6522		5
rs79707978	5:148665909	C/G	AFAP1L1	intron	0.690	0.95839	0.0578	0.4615		6
rs79965038	5:148706857	T/C	AFAP1L1	intron	0.745	1.02337	0.0235	0.3243		6
rs80126929	5:148711404	C/G	AFAP1L1	intron	0.910	1.00864	0.0279	0.7566		7
rs882560	5:148707888	A/T	AFAP1L1	intron	0.892	0.99233	0.0137	0.5724		5
rs920317	5:148690879	T/C	AFAP1L1	intron	0.943	0.97922	0.0206	0.3079		4
rs920318	5:148690612	T/C	AFAP1L1	intron	0.948	0.97834	0.0207	0.2899		4
rs931645	5:148674271	T/C	AFAP1L1	intron	0.983	1.07595	0.0217	0.0007381		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information