SMIM4

Basic Information
Gene SymbolSMIM4
Entrez Id440957
Positionchr3:52570002..52574586
Descriptionsmall integral membrane protein 4
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs1143001003:52579293C/GSMIM4near-gene-30.7361.027270.02870.34885
rs130763983:52573096A/GSMIM4intron0.9980.956950.01060.000030343a
rs46876263:52569098A/GSMIM4intron,near-gene-50.9970.956860.01060.000029221f
rs589245503:52570496A/GSMIM4intron,near-gene-50.9970.968700.03520.36694
rs604155513:52572648A/TSMIM4intron0.9991.069830.03900.083436
rs606113003:52569949T/CSMIM4intron,near-gene-50.9991.033550.03510.34794
rs608237133:52573101A/GSMIM4intron0.9991.069720.03900.084063a
rs609165883:52570765C/GSMIM4coding-synon,near-gene-5,untranslated-50.9981.070150.03900.082074
rs622569033:52573844A/GSMIM4intron0.9780.954560.01070.000013477
rs64455283:52572447A/GSMIM4intron0.9961.041960.01050.000093646
rs67740973:52569480A/CSMIM4intron,near-gene-50.9981.026960.03470.44375
rs738378043:52574012C/GSMIM4intron0.9981.072190.04080.086996
rs746205193:52573350A/GSMIM4intron0.8050.945260.03760.13427
rs766854493:52570330T/GSMIM4intron,near-gene-50.8371.004010.04180.9232b
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information

There is no eQTL snp about this gene!

KEGG annotation

There is no pathway information about this gene!

GO annotation
GO pathway annotationGO:0016021; integral component of membrane
Co-expression Information

There is no gene co-express this gene!

Expression pattern

There is no expression information about these genes!

Note: Avg - average expression of all genes
Description Age Description Age Description Age
Embryonic4-8 PCWEarly fetal18-10 PCWEarly fetal210-13 PCW
Early mid-fetal113-16 PCWEarly mid-fetal216-19 PCWLate mid-fetal19-24 PCW
Late fetal24-38 PCWNeonatal & early infancy0-6 MLate infancy6-12 M
Early childhood1-6 YMiddle and late childhood6-12 YAdolescence12-20 Y
Young adulthood20-40 YMiddle adulthood40-60 YLate adulthood60 Y+
Protein-protein interaction

There is no PPI information about this gene in InWeb