SHISA8

Basic Information
Gene SymbolSHISA8
Entrez Id440829
Positionchr22:42305558..42310671
Descriptionshisa family member 8
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs1070879922:42309993I2/DSHISA8intron0.8931.048960.01870.01043-
rs11749277222:42307239A/GSHISA8coding-synon0.9020.937250.01940.0008395
rs11793374922:42309412A/GSHISA8intron0.9771.147630.05120.0071985
rs1216092622:42309244A/GSHISA8intron0.9910.932300.01970.00036765
rs14692877022:42307810T/CSHISA8intron0.9920.934540.01980.0006156-
rs19061543822:42307753A/TSHISA8intron0.9770.871530.05120.007254-
rs600253622:42307763T/CSHISA8intron0.9910.935290.01960.00062375
rs6160387622:42309650A/GSHISA8intron0.9910.933980.01980.00054345
rs7316512422:42308284T/CSHISA8intron0.9850.936790.01970.00093835
rs7614044922:42307226T/CSHISA8missense0.9911.070580.01980.00056195
rs7728841622:42309549A/GSHISA8intron0.9761.140650.04920.0074715
rs7832856422:42308152T/CSHISA8intron0.9921.070260.01980.00058775
rs7968154922:42307895T/CSHISA8intron0.9841.049700.01560.0019027
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information

There is no eQTL snp about this gene!

KEGG annotation

There is no pathway information about this gene!

GO annotation
GO pathway annotationGO:0032281; AMPA glutamate receptor complex
GO pathway annotationGO:0045202; synapse
GO pathway annotationGO:0048172; regulation of short-term neuronal synaptic plasticity
Co-expression Information

There is no gene co-express this gene!

Expression pattern

There is no expression information about these genes!

Note: Avg - average expression of all genes
Description Age Description Age Description Age
Embryonic4-8 PCWEarly fetal18-10 PCWEarly fetal210-13 PCW
Early mid-fetal113-16 PCWEarly mid-fetal216-19 PCWLate mid-fetal19-24 PCW
Late fetal24-38 PCWNeonatal & early infancy0-6 MLate infancy6-12 M
Early childhood1-6 YMiddle and late childhood6-12 YAdolescence12-20 Y
Young adulthood20-40 YMiddle adulthood40-60 YLate adulthood60 Y+
Protein-protein interaction

There is no PPI information about this gene in InWeb