LRRC48

Basic Information
Gene SymbolLRRC48
Entrez Id83450
Positionchr17:17876127..17920203
Descriptionleucine rich repeat containing 48
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs1107840817:17876011A/GLRRC48near-gene-50.9940.945820.01138.02E-74
rs1107840917:17876296C/GLRRC48intron,near-gene-50.9780.944780.01145.968E-74
rs11736139717:17878856A/GLRRC48intron0.9570.998000.02940.94497
rs1187066017:17877096T/CLRRC48intron,near-gene-50.9931.060460.01132.163E-77
rs2836600717:17876217A/GLRRC48near-gene-5,untranslated-50.9151.039670.03700.29274
rs429920317:17878159T/GLRRC48intron0.9920.943180.01132.506E-74
rs432124717:17878612A/GLRRC48intron0.9890.946300.01116.458E-77
rs447174217:17877771T/CLRRC48intron,near-gene-50.9851.055910.01131.567E-65
rs991412717:17875836A/TLRRC48near-gene-50.9940.946010.01138.779E-74
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information

There is no eQTL snp about this gene!

KEGG annotation

There is no pathway information about this gene!

GO annotation
GO pathway annotationGO:0005515; protein binding
GO pathway annotationGO:0005737; cytoplasm
GO pathway annotationGO:0005856; cytoskeleton
GO pathway annotationGO:0042995; cell projection
Co-expression Information

There is no gene co-express this gene!

Expression pattern
Note: Avg - average expression of all genes
Description Age Description Age Description Age
Embryonic4-8 PCWEarly fetal18-10 PCWEarly fetal210-13 PCW
Early mid-fetal113-16 PCWEarly mid-fetal216-19 PCWLate mid-fetal19-24 PCW
Late fetal24-38 PCWNeonatal & early infancy0-6 MLate infancy6-12 M
Early childhood1-6 YMiddle and late childhood6-12 YAdolescence12-20 Y
Young adulthood20-40 YMiddle adulthood40-60 YLate adulthood60 Y+
Protein-protein interaction

There is no PPI information about this gene in InWeb