LINC00634

Basic Information
Gene SymbolLINC00634
Entrez Id339674
Positionchr22:42348191..42354946
Descriptionlong intergenic non-protein coding RNA 634
Gene typencRNA
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs11343005022:42351054I5/DLINC00634intron0.9330.934910.01830.0002351-
rs1191357822:42347391A/CLINC00634near-gene-50.9921.008640.01290.50714
rs1191363122:42347371T/GLINC00634near-gene-50.9920.991240.01290.49532b
rs1215857922:42351289T/CLINC00634intron0.9810.991930.01300.53567
rs1216797822:42346475A/GLINC00634near-gene-50.9920.991440.01290.50757
rs13967389122:42350090A/GLINC00634intron0.7450.954090.03010.1192-
rs14579370822:42351538T/CLINC00634intron0.8050.920080.03580.02016-
rs14587428422:42351805A/GLINC00634intron0.7750.957150.02090.03618-
rs15032445322:42351381T/CLINC00634intron0.9321.000500.05040.9915-
rs18128161622:42352983T/CLINC00634intron0.9471.009650.05130.8521-
rs18934107522:42354387A/GLINC00634ncRNA0.6950.924960.05230.1357-
rs215759122:42348094C/GLINC00634near-gene-50.9940.933610.01690.00004861b
rs218795922:42347844T/GLINC00634near-gene-50.9911.036860.01140.0014727
rs218796022:42348355T/CLINC00634ncRNA0.9010.939880.02310.0074324
rs2872290722:42348062A/GLINC00634near-gene-50.9181.037070.01890.054342b
rs482206922:42351481T/CLINC00634intron0.9831.046130.01090.000032725
rs482207022:42352081A/GLINC00634intron0.9471.065670.01660.00012377
rs482207122:42353064T/CLINC00634intron0.9861.035830.01140.0020096
rs5830226922:42351309A/GLINC00634intron0.9900.990840.01300.47866
rs6224099322:42346728A/GLINC00634near-gene-50.9200.994710.02120.80357
rs6224099622:42354389A/CLINC00634ncRNA0.9181.030350.01150.0091585
rs6224099722:42354567T/GLINC00634ncRNA0.9901.009650.01300.46035
rs6224099822:42354701A/TLINC00634ncRNA0.9890.965120.01140.0018425
rs651929622:42348602C/GLINC00634intron0.9900.964350.01140.0014557
rs651929722:42349847A/GLINC00634intron0.9940.939690.01680.00021647
rs7316516322:42354642A/TLINC00634ncRNA0.9640.941860.01910.0016595
rs7341700722:42353408A/GLINC00634intron0.9931.068550.01700.00010047
rs968067122:42351477T/CLINC00634intron0.9811.007830.01290.54835
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information

There is no eQTL snp about this gene!

KEGG annotation

There is no pathway information about this gene!

GO annotation

There is no GO annotation information about this gene!

Co-expression Information

There is no gene co-express this gene!

Expression pattern

There is no expression information about these genes!

Note: Avg - average expression of all genes
Description Age Description Age Description Age
Embryonic4-8 PCWEarly fetal18-10 PCWEarly fetal210-13 PCW
Early mid-fetal113-16 PCWEarly mid-fetal216-19 PCWLate mid-fetal19-24 PCW
Late fetal24-38 PCWNeonatal & early infancy0-6 MLate infancy6-12 M
Early childhood1-6 YMiddle and late childhood6-12 YAdolescence12-20 Y
Young adulthood20-40 YMiddle adulthood40-60 YLate adulthood60 Y+
Protein-protein interaction

There is no PPI information about this gene in InWeb