GPX6

Basic Information
Gene SymbolGPX6
Entrez Id257202
Positionchr6:732..5774
Descriptionglutathione peroxidase 6
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs104287596:28477682T/CGPX6intron0.9770.994610.01570.72875
rs1140531376:28482200T/CGPX6intron0.7161.040190.03690.28555
rs1142839086:28485477A/GGPX6near-gene-50.9570.996710.02260.88337
rs1151629986:28479668C/GGPX6intron0.8770.935850.06500.30734
rs1153812506:28480494T/CGPX6intron0.7661.103400.02780.00039475
rs1165231446:28483691T/CGPX6near-gene-50.7301.112270.02560.000032747
rs1166411276:28482149T/CGPX6intron0.6781.014400.04860.76875
rs126607636:28475977A/GGPX6intron0.9811.002400.01660.88597
rs1402666436:28479897C/GGPX6intron0.9681.002900.02270.8969-
rs1441698536:28482408A/GGPX6intron0.9290.999100.05870.988-
rs1448548766:28479767C/GGPX6intron0.7381.027570.03620.4531-
rs1864039356:28479934A/GGPX6intron0.9440.993020.02260.7575-
rs1923074206:28480802C/GGPX6intron0.9781.080800.05930.1904-
rs20719666:28473325T/GGPX6intron0.9980.989650.01680.53564
rs341516106:28474855A/GGPX6intron0.8881.029940.03240.36255
rs354032426:28477582A/GGPX6intron0.9431.033760.02050.10597
rs356047096:28471297A/GGPX6untranslated-30.9561.034690.02030.092827
rs357837716:28477441A/GGPX6intron0.9350.912930.06390.15436
rs359217656:28471560A/CGPX6untranslated-30.9980.989460.01680.52976
rs359962156:28476553T/CGPX6intron0.8861.074440.03280.028865
rs47131666:28472656T/CGPX6intron0.9971.011360.01710.50725
rs47131676:28477895T/CGPX6intron0.9950.998200.01140.87747
rs94683856:28471612T/CGPX6untranslated-30.9971.010760.01650.51957
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information

There is no eQTL snp about this gene!

KEGG annotation
KEGG pathway annotationhsa00480; Glutathione metabolism
KEGG pathway annotationhsa00590; Arachidonic acid metabolism
KEGG pathway annotationhsa04918; Thyroid hormone synthesis
GO annotation
GO pathway annotationGO:0004602; glutathione peroxidase activity
GO pathway annotationGO:0005576; extracellular region
GO pathway annotationGO:0006979; response to oxidative stress
GO pathway annotationGO:0055114; oxidation-reduction process
Co-expression Information

There is no gene co-express this gene!

Expression pattern
Note: Avg - average expression of all genes
Description Age Description Age Description Age
Embryonic4-8 PCWEarly fetal18-10 PCWEarly fetal210-13 PCW
Early mid-fetal113-16 PCWEarly mid-fetal216-19 PCWLate mid-fetal19-24 PCW
Late fetal24-38 PCWNeonatal & early infancy0-6 MLate infancy6-12 M
Early childhood1-6 YMiddle and late childhood6-12 YAdolescence12-20 Y
Young adulthood20-40 YMiddle adulthood40-60 YLate adulthood60 Y+
Protein-protein interaction

There is no PPI information about this gene in InWeb