GFRA3

Basic Information
Gene SymbolGFRA3
Entrez Id2676
Positionchr5:137588069..137610253
DescriptionGDNF family receptor alpha 3
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs100366655:137588149A/TGFRA3untranslated-30.9811.047390.01390.00085635
rs100535415:137591875A/GGFRA3intron0.9940.997100.01100.7917
rs100551205:137592266T/CGFRA3intron0.9851.047390.01380.00080226
rs100614565:137591953T/CGFRA3intron0.9111.002500.01140.82637
rs109525:137588340A/TGFRA3untranslated-31.0000.996610.01090.75467
rs1112264275:137601515T/GGFRA3intron0.9311.053060.01720.0027117
rs1112294195:137606261C/GGFRA3intron0.9380.949330.05130.31056
rs1122987385:137591811T/CGFRA3intron0.9671.029220.03130.35756
rs1135243945:137590802C/GGFRA3intron0.9740.953900.02950.11046
rs1139139815:137590001T/CGFRA3intron0.9740.953990.02950.11056
rs1148018665:137595914T/GGFRA3intron0.8621.011360.04210.78817
rs1155352515:137594169T/CGFRA3intron0.8450.915850.06420.17077
rs1162685215:137589879T/CGFRA3intron0.8361.008030.02750.77066
rs1167922165:137599682T/GGFRA3intron0.8811.128510.03070.000083387
rs119507365:137598340A/GGFRA3intron0.9921.052110.01360.00019247
rs120550455:137608056T/CGFRA3intron0.9860.975990.01270.054867
rs131601145:137591602A/GGFRA3intron0.9681.004010.01120.71976
rs134365755:137600933T/GGFRA3intron0.9991.004210.01100.70146
rs134366255:137601014T/CGFRA3intron0.9771.001900.01110.8617
rs1383030365:137603888T/CGFRA3intron0.6990.943930.05490.2934-
rs1394785125:137593721A/CGFRA3intron0.8450.915940.06420.1713-
rs1401725105:137609326C/GGFRA3intron0.7531.019590.05260.7122-
rs1503364005:137591509A/TGFRA3intron0.9840.894220.03240.0005496-
rs1835210385:137606743A/GGFRA3intron0.7911.001400.06530.983-
rs1843431105:137596334T/GGFRA3intron0.7941.015820.05820.7867-
rs1844897765:137593889C/GGFRA3intron0.6960.954950.05040.3608-
rs1869680835:137607718A/GGFRA3intron0.7360.979320.05480.7022-
rs287048685:137590786A/GGFRA3intron0.9970.996610.01100.75576
rs350023245:137605401A/GGFRA3intron1.0000.987080.01250.29857
rs358372905:137592377T/CGFRA3intron0.9980.986790.01260.29336
rs48356735:137607680T/CGFRA3intron0.9971.006420.01090.55936
rs48357725:137596291C/GGFRA3intron0.6791.064920.05200.22636
rs623818015:137607742T/CGFRA3intron0.7630.964350.05860.53516
rs68826825:137602546T/CGFRA3intron0.9980.990150.01080.35777
rs748106615:137609836A/GGFRA3intron0.8510.998500.02810.95825
rs762492055:137598356T/GGFRA3intron0.7041.012380.04220.77157
rs775368325:137588937T/CGFRA3intron0.9271.022040.01960.26445
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information

There is no eQTL snp about this gene!

KEGG annotation

There is no pathway information about this gene!

GO annotation
GO pathway annotationGO:0001764; neuron migration
GO pathway annotationGO:0005102; receptor binding
GO pathway annotationGO:0005737; cytoplasm
GO pathway annotationGO:0005886; plasma membrane
GO pathway annotationGO:0007165; signal transduction
GO pathway annotationGO:0007399; nervous system development
GO pathway annotationGO:0007411; axon guidance
GO pathway annotationGO:0007422; peripheral nervous system development
GO pathway annotationGO:0008046; axon guidance receptor activity
GO pathway annotationGO:0009897; external side of plasma membrane
GO pathway annotationGO:0019898; extrinsic component of membrane
GO pathway annotationGO:0031225; anchored component of membrane
GO pathway annotationGO:0043231; intracellular membrane-bounded organelle
GO pathway annotationGO:0048485; sympathetic nervous system development
Co-expression Information

There is no gene co-express this gene!

Expression pattern
Note: Avg - average expression of all genes
Description Age Description Age Description Age
Embryonic4-8 PCWEarly fetal18-10 PCWEarly fetal210-13 PCW
Early mid-fetal113-16 PCWEarly mid-fetal216-19 PCWLate mid-fetal19-24 PCW
Late fetal24-38 PCWNeonatal & early infancy0-6 MLate infancy6-12 M
Early childhood1-6 YMiddle and late childhood6-12 YAdolescence12-20 Y
Young adulthood20-40 YMiddle adulthood40-60 YLate adulthood60 Y+
Protein-protein interaction