GC

Basic Information
Gene SymbolGC
Entrez Id2638
Positionchr4:72607410..72671237
Descriptiongroup-specific component (vitamin D binding protein)
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs100246004:72668616T/CGCintron0.9990.990250.01350.46546
rs1112271714:72621052A/GGCintron0.8511.078960.03360.023737
rs1119788544:72642367T/CGCintron0.6980.931000.02840.011987
rs1135748644:72628003T/CGCintron0.9731.036450.02370.13177
rs1138765004:72666339T/GGCintron0.9931.035410.02070.093477
rs1143291484:72615286A/GGCintron0.8380.991640.04980.86565
rs1145859704:72643097T/CGCintron0.8870.922470.05690.15657
rs1147370004:72648939A/GGCintron0.7571.042890.04420.34276
rs1148355164:72664026A/GGCintron0.8280.968890.04200.45177
rs1149329514:72631184T/CGCcoding-synon0.7230.894130.05790.053265
rs1151038834:72621395T/CGCintron0.8581.031280.03890.42786
rs1153668594:72642605T/CGCintron0.8211.014810.05410.78667
rs1159464994:72661907T/CGCintron0.9070.998000.01630.90226
rs1165340514:72627525A/GGCintron0.7460.987970.04340.78047
rs1167484214:72632759T/CGCintron0.7250.998800.03470.97186
rs126401794:72612687C/GGCintron1.0000.946770.01990.0058965
rs126440504:72612911T/CGCintron1.0000.946390.01990.0055137
rs131420624:72610021A/CGCintron0.8280.984820.01170.19096
rs131482774:72661762T/CGCintron0.9921.009650.01330.46956
rs13528434:72642954T/CGCintron0.9941.012380.01750.48187
rs13528444:72647749T/CGCintron0.9980.993620.01650.69926
rs13528454:72647762A/GGCintron1.0000.993020.01310.58966
rs13528464:72617775A/GGCintron0.9910.997100.01180.80436
rs1385418164:72613631A/GGCintron0.6540.950660.07280.4872-
rs1391257974:72662491A/GGCintron0.9841.035000.02080.09773-
rs1398688164:72621004T/CGCintron0.8131.044460.02790.1188-
rs1400026324:72658267T/GGCintron0.9981.008230.01650.6217-
rs1407636354:72660195T/CGCintron0.9981.008130.01650.6237-
rs1415785374:72616495A/GGCintron0.6171.095380.07720.2379-
rs1416180494:72660474T/GGCintron0.6741.054320.05980.3769-
rs1420188014:72639444A/GGCintron0.7060.844090.07020.0158-
rs1428114374:72648824C/GGCintron0.9730.906920.05450.07328-
rs1444070474:72614768A/CGCintron0.7180.935940.03810.08234-
rs1446160294:72660248A/TGCintron0.9490.963680.03850.3366-
rs1446276354:72657952T/CGCintron0.9980.991930.01650.6249-
rs1454793264:72658415T/CGCintron0.9921.035930.02080.08891-
rs1485681104:72657716T/CGCintron0.9911.035720.02080.09083-
rs1490022024:72634361T/GGCintron0.7471.065350.06340.3176-
rs1491266984:72608321T/CGCintron0.6510.949800.07300.4804-
rs14917184:72641279T/CGCintron0.9971.012780.01740.46726
rs1500685054:72653392A/TGCintron0.8351.051590.04620.2754-
rs1510124574:72659626A/GGCintron0.8340.984420.05440.7728-
rs168469434:72619996A/CGCintron0.9890.996210.02020.85087
rs168470154:72638824A/CGCintron0.9961.037590.02340.11595
rs168470284:72651525A/GGCintron,near-gene-50.9970.991930.01650.62227
rs168470314:72652957A/GGCintron0.9921.038840.02090.068466
rs168470364:72654225A/GGCintron0.9920.965410.02070.089427
rs168470394:72654267T/CGCintron0.9981.009650.01350.47727
rs168470474:72655175T/CGCintron0.9980.992030.01650.63045
rs168470504:72667331T/CGCintron0.9980.991440.01650.60427
rs168470544:72668959T/CGCintron0.9911.035720.02080.091156
rs178308034:72618985C/GGCintron0.9870.988760.02210.60845
rs1829019864:72646441A/GGCintron0.9801.043310.02120.04601-
rs1851248454:72643767A/CGCintron0.6051.097240.06260.1382-
rs1897702654:72660277A/TGCintron0.7301.167660.07380.03572-
rs1916321544:72633525T/CGCintron0.7040.989360.06530.8695-
rs20707414:72607678T/GGCintron0.9950.946860.01990.0060866
rs21779224:72651624A/GGCintron,near-gene-50.8320.987380.05440.81567
rs2219994:72649048A/GGCintron0.9441.006620.01210.58626
rs2220014:72625963T/GGCintron0.7900.972780.01870.14027
rs2220024:72626044A/CGCintron0.9620.989360.02080.60876
rs2220034:72626088C/GGCintron0.9641.010860.02080.60246
rs2220054:72626861A/TGCintron0.9670.984130.01770.36637
rs2220064:72626999T/CGCintron0.9530.985010.01770.39157
rs2220074:72628223A/GGCintron0.9841.015520.01760.38116
rs2220104:72631744T/CGCintron0.9761.043520.02210.053474
rs2220114:72631899A/CGCintron0.9960.985800.01750.4145
rs2220144:72632931T/CGCintron0.9990.985410.01740.39837
rs2220174:72635512A/TGCintron1.0000.985410.01740.39676
rs2220264:72643760A/TGCintron0.9591.006520.01430.64855
rs2220294:72644962A/GGCintron0.9840.992330.01420.58596
rs2220354:72621674T/GGCintron0.9811.019390.01080.074386
rs2220404:72616932A/GGCintron0.9930.985310.01070.16777
rs2220424:72612616A/GGCintron0.9920.987970.02220.5855
rs2220434:72611699A/GGCintron0.9920.988370.02220.59915
rs2220464:72610850T/CGCintron0.9940.990350.02220.66326
rs2220474:72610208A/CGCintron0.9961.018670.01070.085236
rs22764614:72628969A/GGCintron0.9581.035720.02350.13516
rs22826794:72608383T/GGCintron1.0000.997300.01170.81487
rs22826804:72608364T/CGCintron1.0001.002300.01170.84116
rs22988494:72648851A/GGCintron0.9990.992930.01310.58646
rs22988504:72614267C/GGCintron0.9931.003210.01190.78666
rs23650834:72660548A/GGCintron0.9990.990450.01330.46917
rs284218414:72608632A/GGCintron0.6780.972290.04570.53867
rs284597154:72646140A/GGCintron0.9850.968020.02050.11257
rs284623244:72644604A/GGCintron0.6671.014910.04260.72767
rs287611984:72663620A/GGCintron0.7170.927000.06580.24967
rs43642284:72623347A/GGCintron0.9880.994120.02020.76996
rs45197654:72659177T/CGCintron0.9930.964930.02070.085196
rs45884:72618323T/GGCintron,missense0.9971.002400.01170.83785
rs46944314:72634343T/CGCintron0.9961.037800.02350.11395
rs46944324:72634383A/GGCintron0.9960.963680.02350.11497
rs579628134:72647127A/CGCintron0.6820.977160.02530.366
rs592412774:72641506A/GGCintron0.9890.964540.02350.1256
rs594317864:72660740T/CGCintron0.9930.965320.02070.088855
rs596625614:72669491C/GGCintron0.9931.036450.02070.083667
rs603356954:72664281A/GGCintron0.9930.964930.02070.084847
rs603499344:72626488T/CGCintron0.9390.955140.02010.022537
rs623021664:72639207T/GGCintron0.7921.002100.02420.93166
rs623021674:72639282T/CGCintron0.9430.997700.01210.85116
rs64467614:72621679T/CGCintron0.9881.004310.02030.83116
rs668119584:72645806A/GGCintron0.9831.033030.02050.11217
rs669177194:72663170A/GGCintron0.9161.038420.01970.056097
rs675435844:72663276T/CGCintron0.9840.965320.02070.087776
rs675738304:72633669T/CGCintron0.9940.963970.02350.11867
rs68179124:72653705T/CGCintron0.9921.037070.02070.079317
rs68458694:72612902T/GGCintron0.9890.972100.03890.46717
rs68459254:72612975A/TGCintron0.9881.029220.03880.45756
rs68571884:72625900A/CGCintron0.9660.988960.02080.59247
rs7051214:72615833A/GGCintron0.9931.014500.01070.1797
rs7051254:72654877T/GGCintron0.9990.992630.01310.57067
rs726078284:72632406T/CGCintron0.9901.037380.02350.11896
rs726078294:72645286A/GGCintron0.9741.034690.02370.14935
rs726078304:72655295C/GGCintron0.9911.035720.02070.090825
rs738273834:72612234A/GGCintron0.9611.021220.03640.56387
rs745002604:72663435A/GGCintron1.0001.010250.01600.52167
rs747062964:72664972T/CGCintron0.8080.984420.01890.4087
rs757746904:72632642T/CGCintron0.7341.026240.03100.40497
rs767811224:72669661A/CGCintron,missense0.9661.021220.03440.54137
rs768030944:72620788T/CGCcoding-synon0.6551.048960.04310.26766
rs773173294:72668162A/GGCintron0.8021.063860.04500.16886
rs780441214:72644297A/GGCintron0.9901.011060.01750.53046
rs794447004:72620557T/CGCintron0.8020.943080.03220.068746
rs8429984:72627797C/GGCintron0.9760.990740.01420.51046
rs8429994:72611690C/GGCintron0.9680.978040.01090.041695
rs8430054:72616327T/CGCintron0.9930.985310.01070.16817
rs8430064:72656076T/GGCintron0.9991.009240.01330.48866
rs8430074:72656098A/GGCintron0.9890.991240.01330.50827
rs8430084:72656175T/GGCintron0.9980.990150.01350.46467
rs8430094:72656255T/GGCintron0.9991.009750.01330.46556
rs8430114:72658064A/TGCintron0.9440.997700.01100.8336
rs8448064:72613792T/CGCintron0.9921.015720.01080.1477
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information

There is no eQTL snp about this gene!

KEGG annotation

There is no pathway information about this gene!

GO annotation
GO pathway annotationGO:0003779; actin binding
GO pathway annotationGO:0005499; vitamin D binding
GO pathway annotationGO:0005576; extracellular region
GO pathway annotationGO:0005615; extracellular space
GO pathway annotationGO:0005829; cytosol
GO pathway annotationGO:0006766; vitamin metabolic process
GO pathway annotationGO:0006775; fat-soluble vitamin metabolic process
GO pathway annotationGO:0007565; female pregnancy
GO pathway annotationGO:0007595; lactation
GO pathway annotationGO:0030424; axon
GO pathway annotationGO:0031667; response to nutrient levels
GO pathway annotationGO:0032355; response to estradiol
GO pathway annotationGO:0042359; vitamin D metabolic process
GO pathway annotationGO:0043202; lysosomal lumen
GO pathway annotationGO:0044281; small molecule metabolic process
GO pathway annotationGO:0048471; perinuclear region of cytoplasm
GO pathway annotationGO:0051180; vitamin transport
GO pathway annotationGO:0051183; vitamin transporter activity
GO pathway annotationGO:0070062; extracellular exosome
GO pathway annotationGO:0072562; blood microparticle
GO pathway annotationGO:1902118; calcidiol binding
Co-expression Information

There is no gene co-express this gene!

Expression pattern

There is no expression information about these genes!

Note: Avg - average expression of all genes
Description Age Description Age Description Age
Embryonic4-8 PCWEarly fetal18-10 PCWEarly fetal210-13 PCW
Early mid-fetal113-16 PCWEarly mid-fetal216-19 PCWLate mid-fetal19-24 PCW
Late fetal24-38 PCWNeonatal & early infancy0-6 MLate infancy6-12 M
Early childhood1-6 YMiddle and late childhood6-12 YAdolescence12-20 Y
Young adulthood20-40 YMiddle adulthood40-60 YLate adulthood60 Y+
Protein-protein interaction