ATXN7

Basic Information
Gene SymbolATXN7
Entrez Id6314
Positionchr3:63850233..63989138
Descriptionataxin 7
Gene typeprotein-coding
SNP Information

SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*
rs10058113:63959704T/CATXN7intron0.9681.055170.01132.073E-67
rs105109023:63973002A/GATXN7intron0.9850.999800.02870.99316
rs105109033:63970192C/GATXN7intron0.9920.950470.01570.0012287
rs1115261323:63939396A/GATXN7intron0.9601.055590.01630.00087927
rs1117743243:63889148T/CATXN7intron0.9641.050220.03640.17815
rs1126354583:63901366A/TATXN7intron0.9490.948100.03600.13956
rs1126742993:63982670T/CATXN7intron0.9881.047180.01470.0016797
rs1128931273:63871348A/GATXN7intron0.9420.935760.05280.20836
rs1132310453:63878338T/CATXN7intron0.9600.953230.03660.19027
rs1132691083:63889037T/CATXN7intron0.8620.956570.03750.23725
rs1134415583:63957951A/GATXN7intron0.8880.985310.04010.71215
rs1137215233:63874429T/CATXN7intron0.9751.063860.01610.00012027
rs1140669633:63875225A/CATXN7intron0.9871.059290.05360.28216
rs1141180003:63922732C/GATXN7intron0.9870.946670.05380.30892b
rs1141341543:63867142T/GATXN7intron0.7240.992630.02680.78347
rs1142398093:63978992A/GATXN7intron0.9860.946010.05370.30086
rs1143665153:63850798T/CATXN7intron,near-gene-50.9740.937070.05700.25475
rs1143835973:63948711T/CATXN7intron0.9171.058020.05330.28997
rs1145012403:63935768A/GATXN7intron0.9741.032620.04000.42197
rs1145826813:63871096A/GATXN7intron0.6111.003210.04950.94877
rs1145891343:63857176A/GATXN7intron0.9471.060030.03590.10417
rs1146244153:63962902A/GATXN7intron0.8910.984320.05940.796
rs1146987673:63893629C/GATXN7intron0.9860.946770.05380.30926
rs1148107433:63907478A/GATXN7intron0.8950.984420.05870.78897
rs1148867183:63882342T/CATXN7intron,near-gene-50.9780.938850.05740.27135
rs1151614393:63938767T/CATXN7intron0.9881.048540.05400.38055
rs1152516153:63860186T/CATXN7intron0.9521.058130.05340.29037
rs1152550543:63950513T/CATXN7intron0.8171.088390.05820.14513a
rs1153165623:63904534T/CATXN7intron0.8911.069620.04200.10925
rs1154454173:63907877A/GATXN7intron0.8781.031790.03960.42934
rs1154940753:63879116C/GATXN7intron0.7130.858220.04260.00032757
rs1155938693:63871656A/CATXN7intron0.9770.942050.05740.29867
rs1156793453:63870020A/TATXN7intron0.7750.964250.01590.022286
rs1158602253:63874188T/CATXN7intron0.9230.964060.03000.22257
rs1159071803:63937415T/CATXN7intron0.9531.063010.03530.08385
rs1161034443:63870018A/GATXN7intron0.7760.965700.01590.028646
rs1163145413:63870019A/GATXN7intron0.7760.965700.01590.028646
rs1163304433:63896278A/GATXN7intron0.8921.069620.04200.10954
rs1164105843:63873666A/GATXN7intron0.7461.028600.02600.27896
rs1164548123:63916160A/GATXN7intron0.8770.966380.03940.38556
rs1165042993:63878963T/GATXN7intron0.7131.165210.04260.00032697
rs1167050223:63950738A/GATXN7intron0.9471.072080.02510.0055725
rs1167564573:63965061A/GATXN7intron0.9630.923950.05700.16582b
rs1167566803:63956457T/CATXN7intron0.8931.069300.04190.10982a
rs119145733:63878339A/GATXN7intron0.8551.033450.04480.46287
rs124853173:63937992T/CATXN7intron0.8780.968310.01580.041965
rs126310453:63856085T/CATXN7intron0.9720.961460.01420.0057065
rs126333533:63970280T/CATXN7intron0.9730.944030.01590.00029667
rs130607873:63963061A/CATXN7intron0.8880.979320.03470.5475
rs130653743:63969132A/GATXN7intron0.9810.998200.02870.94896
rs130751343:63974084T/CATXN7intron0.9861.003410.02890.90757
rs130781543:63971490A/GATXN7intron0.9850.998600.02880.96156
rs134339093:63948609C/GATXN7intron0.9850.958200.01440.0030266
rs134340893:63948566T/CATXN7intron0.9920.940540.01530.000062447
rs1385472683:63871485C/GATXN7intron0.9540.954850.03670.2082-
rs1385886163:63912779A/GATXN7intron0.7581.066520.05380.2309-
rs1390445983:63894948A/GATXN7intron0.8860.932670.05050.1675-
rs1399847213:63851650T/CATXN7intron,near-gene-50.8961.040710.02980.1804-
rs1402132733:63982890T/CATXN7intron0.9220.955230.03830.2318-
rs1412563813:63975704T/CATXN7intron0.6721.043620.06300.4983-
rs1412870643:63972727T/CATXN7intron0.8120.957050.06370.4903-
rs1413379613:63930584T/CATXN7intron0.9881.056430.05390.3082-
rs1429801213:63985907A/GATXN7untranslated-30.7661.067050.06940.3496-
rs1431931503:63959737T/CATXN7intron0.7650.955420.05160.3773-
rs1432752263:63972878A/GATXN7intron0.9710.922190.05650.1514-
rs1433682583:63941950A/TATXN7intron0.9820.946490.05340.3032-
rs1442211023:63952255A/GATXN7intron,near-gene-50.8931.016430.05910.7834-
rs1445221233:63926377A/GATXN7intron0.7581.065880.05380.235-
rs1448415393:63937231T/GATXN7intron0.7661.065130.05180.2228-
rs1454042543:63906961A/GATXN7intron0.6101.290330.08350.002282-
rs1463620603:63894001T/CATXN7intron0.9561.060140.03520.09738-
rs1467807083:63901684A/TATXN7intron0.9560.942420.03520.09241-
rs1469017883:63888945C/GATXN7intron0.8810.899600.03760.004878-
rs1470028983:63961864A/GATXN7intron0.9330.999100.05950.988-
rs1470321653:63958762A/GATXN7intron0.7980.880290.05300.01612-
rs1470837343:63977607A/GATXN7intron0.9710.924690.05640.1652-
rs1471780173:63942128A/TATXN7intron0.9311.056010.03450.1139-
rs1472094313:63955518C/GATXN7intron0.9390.937910.05680.2591-
rs1474733673:63953727A/GATXN7intron0.9470.953990.03740.207-
rs1478934173:63910783T/CATXN7intron0.7581.066520.05380.2306-
rs1481982173:63948290A/GATXN7intron0.9830.946580.05350.3048-
rs1486351623:63942190T/CATXN7intron0.9521.062690.03530.08545-
rs1486906163:63872286A/GATXN7intron0.9571.047070.03680.211-
rs1488700483:63896420A/GATXN7intron0.9130.939130.05290.2352-
rs1491879093:63881091A/GATXN7intron0.8991.105500.03630.005694-
rs1502752253:63917228T/CATXN7intron0.9420.944310.04270.1801-
rs1505038253:63967537C/GATXN7intron0.7691.050220.06470.4494-
rs15480413:63960487A/TATXN7intron0.8681.025420.01820.16927
rs170694593:63862468A/GATXN7intron0.9750.930250.05530.19154
rs170695003:63924724A/GATXN7intron0.9841.064070.03830.10457
rs170695073:63924956A/GATXN7intron0.9870.944410.01590.00032773a
rs170695363:63944669A/CATXN7intron0.9521.060560.03540.096177
rs170695653:63955008A/GATXN7intron0.9391.063960.03610.085715
rs170695713:63955425A/GATXN7intron0.9790.943270.05170.25867
rs170695923:63963210T/CATXN7intron0.9891.009440.03140.76497
rs170696033:63969428A/GATXN7intron0.9840.999900.02880.99646
rs170696123:63977676A/GATXN7intron0.9860.998900.02860.97017
rs170696163:63978852A/GATXN7intron0.9191.067910.03690.074965
rs174015923:63954490A/GATXN7intron0.9890.954660.01540.0026394
rs1812161263:63948120A/GATXN7intron0.7611.239610.05880.0002606-
rs1816311863:63851415A/CATXN7intron,near-gene-50.8521.054750.05770.3558-
rs1818784353:63912354T/CATXN7intron0.9650.967540.05130.5205-
rs1843313203:63972025T/CATXN7intron0.8071.106940.06410.1131-
rs1847020733:63851495T/CATXN7intron,near-gene-50.9711.054540.01560.0006778-
rs1859658103:63951133A/GATXN7intron0.9650.965120.05120.4884-
rs1863076703:63867503T/CATXN7intron0.7441.069620.06050.2657-
rs1866595363:63865293A/GATXN7intron0.9291.035830.05780.5421-
rs1868843543:63963936T/GATXN7intron0.9390.953040.03790.2043-
rs1874944523:63892353A/TATXN7intron0.8950.985410.05870.8021-
rs1875371473:63959839A/GATXN7intron0.7650.998500.05380.9776-
rs1879989533:63849899T/CATXN7intron,near-gene-50.6110.913200.04990.069-
rs1881159403:63961083A/TATXN7intron0.9840.952660.05370.3662-
rs1886727793:63885446A/CATXN7intron0.8121.022650.04010.5759-
rs1888808893:63851295T/CATXN7intron,near-gene-50.9501.032620.03140.3068-
rs1893774893:63915190A/GATXN7intron0.9540.945630.03520.112-
rs1900838173:63866289A/GATXN7intron0.8771.044250.05950.4672-
rs1914072713:63850214T/CATXN7near-gene-50.9360.972870.03410.4203-
rs1917906913:63948278A/GATXN7intron0.8931.069190.04190.1107-
rs20561143:63927243A/GATXN7intron0.8671.009650.01440.50577
rs22418213:63976145A/GATXN7intron0.9731.028910.01950.1437
rs22418223:63965304A/GATXN7intron0.9940.952660.01550.0017715
rs22418233:63965093A/CATXN7intron0.9951.054850.01132.15E-63a
rs286757883:63942188C/GATXN7intron0.9910.941950.01530.000093926
rs339999323:63970528T/GATXN7intron0.9841.000100.02880.99597
rs354439953:63984904A/GATXN7intron0.9840.998700.02880.96386
rs355948923:63942835A/GATXN7intron0.7521.043520.02830.13256
rs38219003:63886349T/GATXN7intron0.8981.033140.02280.15325
rs38219013:63918912T/CATXN7intron0.9551.061730.03530.089142b
rs38219023:63941697T/GATXN7intron0.9970.953520.01540.0019625
rs39105343:63925676A/TATXN7intron0.9670.963870.01860.04777
rs584738943:63857208C/GATXN7intron0.9681.042270.01410.0034016
rs586768573:63903883A/GATXN7intron0.9951.053480.01500.00050415
rs599713143:63914618C/GATXN7intron0.9761.060670.01164.04E-75
rs617365673:63981676T/CATXN7coding-synon0.9390.965610.03090.25867
rs617365743:63968083A/GATXN7missense0.9850.945730.05370.29857
rs622508783:63851037A/TATXN7intron,near-gene-50.8410.989950.03740.78675
rs622516283:63878305T/CATXN7intron0.8670.988470.02760.67377
rs622523633:63910231A/GATXN7intron0.8990.985510.02710.58967
rs622523643:63916072T/GATXN7intron0.8801.015720.02720.56656
rs622523683:63959465T/CATXN7intron0.9641.038630.01350.0049627
rs64453873:63962678C/GATXN7intron0.9910.962040.01460.0081134
rs664907423:63913653A/GATXN7intron0.9651.058660.01630.00046932b
rs668186343:63913222A/GATXN7intron0.9651.058660.01630.0004735
rs669792163:63965948T/GATXN7intron0.9790.999500.02880.98627
rs67708643:63902629A/GATXN7intron0.9931.064490.01530.000043837
rs67762093:63858633C/GATXN7intron0.9921.056540.01510.00026925
rs67793723:63850298T/GATXN7near-gene-5,untranslated-50.9341.047390.01270.00027844
rs679449033:63871195A/TATXN7intron0.9890.963000.01450.0095696
rs68013463:63947128A/GATXN7intron0.9941.046660.01560.0034087
rs68091003:63901180A/GATXN7intron0.9990.951040.01550.0011955
rs7043603:63884800A/GATXN7intron0.9721.066840.01540.000025937
rs7043613:63883671T/GATXN7intron,near-gene-50.9821.064600.01540.000046897
rs7043643:63874734A/GATXN7intron0.9941.063220.01147.144E-86
rs7043673:63868777A/CATXN7intron0.9911.063430.01146.539E-85
rs7043723:63867453T/CATXN7intron0.9701.046660.01410.0012455
rs7043733:63867355A/GATXN7intron0.9911.063110.01124.59E-87
rs7043743:63865947T/CATXN7intron0.9870.943560.01450.000060276
rs712986913:63878599T/GATXN7intron0.7430.944500.02720.035677
rs712986923:63902018A/TATXN7intron0.9011.013290.03990.74177
rs712986943:63937363A/TATXN7intron0.9251.000800.05980.98875
rs728769803:63966827A/TATXN7intron0.9880.979320.03900.59245
rs728803133:63896272A/GATXN7intron0.9801.083610.05520.14564
rs728839843:63932453C/GATXN7intron0.8541.029730.03800.44045
rs728857363:63963536A/TATXN7intron0.9890.994910.03150.87097
rs728857373:63965867T/CATXN7intron0.9871.020610.03910.60127
rs731170363:63892725C/GATXN7intron0.9991.052430.01550.00096846
rs731170403:63893818C/GATXN7intron0.7950.910010.05220.070834
rs731170413:63896266A/TATXN7intron0.9980.951320.01550.0012474
rs731170423:63896543T/CATXN7intron0.9980.951230.01550.0012284
rs731170453:63910613A/GATXN7intron0.9610.948570.01620.0011587
rs731170473:63910779A/GATXN7intron0.9621.056220.01630.00078245
rs731170573:63915689A/GATXN7intron0.9620.946860.01630.00079457
rs731170593:63916028A/GATXN7intron0.9660.946110.01630.00067317
rs731170663:63926236A/GATXN7intron0.9980.952470.01540.0016233a
rs731170783:63942084A/GATXN7intron0.9621.054540.01630.0010957
rs731170823:63947565A/GATXN7intron0.9910.940450.01530.000061252b
rs731170833:63948455C/GATXN7intron0.9921.045610.01550.004167
rs731170873:63948696A/GATXN7intron0.9930.956760.01560.0045257
rs731170923:63958418T/GATXN7intron0.8240.974920.01890.17997
rs731171023:63964213T/CATXN7intron0.8181.076590.03730.047626
rs731190183:63975328A/GATXN7intron0.9760.942990.01560.00017087
rs731190223:63979834T/CATXN7intron0.9930.950560.01530.00090855
rs731305343:63859813A/GATXN7intron0.9970.949140.01560.00078436
rs731305443:63868596A/GATXN7intron0.9961.051800.01550.0011525
rs731305543:63875566A/GATXN7intron0.7991.057390.05380.29935
rs731305653:63887135T/CATXN7intron0.9980.950560.01550.0010527
rs731305763:63890875T/CATXN7intron0.9980.950850.01550.0011196
rs743225293:63929361A/GATXN7intron0.9880.946580.05390.30827
rs748226283:63941618C/GATXN7intron0.9820.946490.05340.30335
rs752327273:63977452A/GATXN7intron0.9571.032000.03120.31286
rs755478333:63979212A/CATXN7intron0.9570.968990.03120.31195
rs756861363:63921224C/GATXN7intron0.9651.046660.03570.20187
rs757916793:63940782A/GATXN7intron0.9880.946580.05390.30835
rs762014833:63859375C/GATXN7intron0.9501.032930.03140.3027
rs76215443:63928681A/CATXN7intron0.9841.045190.01390.0015217
rs76276903:63900477A/CATXN7intron0.9961.062160.01141.318E-75
rs763725993:63980475T/CATXN7intron0.9861.056860.05370.30317
rs768375713:63883394T/CATXN7intron,near-gene-50.9871.059290.05360.28196
rs769777253:63965154A/GATXN7intron0.9840.946110.05360.30165
rs770523973:63905726T/GATXN7intron0.8781.031490.03960.43395
rs772037943:63985316A/GATXN7untranslated-30.8270.917500.04860.076155
rs772427623:63909699A/GATXN7intron0.8781.031790.03960.42967
rs775079383:63977542A/GATXN7intron0.9861.057280.05370.29927
rs775895163:63923091T/CATXN7intron0.9870.946670.05380.3096
rs776383353:63964996A/TATXN7intron0.9840.946110.05360.30163a
rs777960483:63864160A/TATXN7intron0.9521.066410.05330.22716
rs779176753:63889842A/CATXN7intron0.9810.931000.05800.21767
rs779851503:63953333T/CATXN7intron,near-gene-50.9551.031380.03130.32214
rs783223593:63914335C/GATXN7intron0.8770.967050.03960.39715
rs783373133:63857902A/GATXN7intron0.7711.017960.02810.52575
rs787345583:63945644A/TATXN7intron0.9580.973850.02960.36956
rs787812783:63953289T/GATXN7intron,near-gene-50.9550.969570.03130.32296
rs788666423:63905710T/CATXN7intron0.9860.953610.05390.37897
rs791444493:63918892T/CATXN7intron0.9860.946580.05380.30814
rs796615303:63912999C/GATXN7intron0.9861.056430.05380.30777
rs797017723:63872951A/GATXN7intron0.9520.934260.03830.075817
rs798960763:63987013T/CATXN7untranslated-30.9880.947150.05370.31235
rs799547013:63968863T/CATXN7intron0.9680.922650.05660.1557
rs8321923:63853423T/CATXN7intron0.9891.065240.01540.000038727
rs8321933:63854445T/CATXN7intron0.9900.944410.01440.000075496
rs8321943:63857071A/GATXN7intron0.9860.945160.01440.000092147
rs8321953:63864612T/CATXN7intron0.9891.063860.01157.127E-82b
rs8321973:63884292T/CATXN7intron0.9920.946960.01121.122E-67
rs8321983:63870352T/GATXN7intron0.9720.974430.01330.051667
rs8321993:63865531A/GATXN7intron0.9841.057920.01450.00010256
rs8546223:63862842A/GATXN7intron0.9931.061520.01129.164E-86
rs8649753:63885615T/CATXN7intron0.9831.066950.01550.000027456
rs98205383:63940509T/CATXN7intron0.9911.060460.01530.00012616
rs98705763:63891105T/CATXN7intron0.9290.942900.01640.00034667
rs98828843:63890130A/GATXN7intron0.9970.942900.01132.046E-76
SNPPositionAlelleGeneAnnotationInfoOrSeP-valueeQTLScore*

  Note: RegulomeDB score*
score supporting data score supporting data
1aeQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak6other
2aTF binding + matched TF motif + matched DNase Footprint + DNase peak5TF binding or DNase peak
1beQTL + TF binding + any motif + DNase Footprint + DNase peak4TF binding + DNase peak
2bTF binding + any motif + DNase Footprint + DNase peak3bTF binding + matched TF motif
1ceQTL + TF binding + matched TF motif + DNase peak1feQTL + TF binding / DNase peak
2cTF binding + matched TF motif + DNase peak3aTF binding + any motif + DNase peak
1deQTL + TF binding + any motif + DNase peak1eeQTL + TF binding + matched TF motif
CNV Information

The gene is not affected by CNV!

eQTL Information

There is no eQTL snp about this gene!

KEGG annotation

There is no pathway information about this gene!

GO annotation
GO pathway annotationGO:0000226; microtubule cytoskeleton organization
GO pathway annotationGO:0003682; chromatin binding
GO pathway annotationGO:0005515; protein binding
GO pathway annotationGO:0005634; nucleus
GO pathway annotationGO:0005654; nucleoplasm
GO pathway annotationGO:0005730; nucleolus
GO pathway annotationGO:0005737; cytoplasm
GO pathway annotationGO:0006325; chromatin organization
GO pathway annotationGO:0006351; transcription, DNA-templated
GO pathway annotationGO:0006997; nucleus organization
GO pathway annotationGO:0007601; visual perception
GO pathway annotationGO:0015630; microtubule cytoskeleton
GO pathway annotationGO:0016363; nuclear matrix
GO pathway annotationGO:0016578; histone deubiquitination
GO pathway annotationGO:0030914; STAGA complex
GO pathway annotationGO:0042326; negative regulation of phosphorylation
GO pathway annotationGO:0043569; negative regulation of insulin-like growth factor receptor signaling pathway
GO pathway annotationGO:0045944; positive regulation of transcription from RNA polymerase II promoter
Co-expression Information

There is no gene co-express this gene!

Expression pattern
Note: Avg - average expression of all genes
Description Age Description Age Description Age
Embryonic4-8 PCWEarly fetal18-10 PCWEarly fetal210-13 PCW
Early mid-fetal113-16 PCWEarly mid-fetal216-19 PCWLate mid-fetal19-24 PCW
Late fetal24-38 PCWNeonatal & early infancy0-6 MLate infancy6-12 M
Early childhood1-6 YMiddle and late childhood6-12 YAdolescence12-20 Y
Young adulthood20-40 YMiddle adulthood40-60 YLate adulthood60 Y+
Protein-protein interaction