Author Year PMID Exome Capture Kit Sequence Platform Case Number Control Number Sample Description Familial or Sporadic Ancestry Amino Acid Change Mutation Type Annotation De novo? PoluPhen-2 Gene Position SIFT Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.C30S SNV missense de novo Probably damaging PLCL2 chr3:17051253; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.R1081H SNV missense de novo Probably damaging WDR11 chr10:122664879; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.G539R SNV missense de novo Probably damaging DPYD chr1:97981407; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.G202R SNV missense de novo Probably damaging OR4C46 chr11:51515885; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.L32M SNV missense de novo Probably damaging UGT1A3 chr2:234637866; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.Y147C SNV missense de novo Probably damaging FAM3D chr3:58622886; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.S45C SNV missense de novo Probably damaging KLF12 chr13:74289537; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.S1020G SNV missense de novo Probably damaging ADCY7 chr16:50349011; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.T102I SNV missense de novo Probably damaging GPR153 chr1:6314661; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.T75M SNV missense de novo Probably damaging PML chr15:74290439; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.E512K SNV missense de novo Probably damaging SLC26A8 chr6:35927251; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.N105S SNV missense de novo Probably damaging CCDC108 chr2:219900235; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.H678R SNV missense de novo Probably damaging TRAK1 chr3:42261055; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.A413G SNV missense de novo Probably damaging FASTKD5 chr20:3128479; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.P429R SNV missense de novo Probably damaging DGCR2 chr22:1902868; absent in 1000 Genomes Project - Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.Y170C SNV missense de novo Probably damaging ACOT6 chr14:74086428; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.R217W SNV missense/splice de novo Probably damaging PITPNM1 chr11:67267884; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.G231S SNV missense/splice de novo Possibly damaging NPRL2 chr3:50385987; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.T256S SNV missense de novo Unknown MAGEC1 chrX:140993957; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.I295F SNV missense de novo Unknown TRRAP chr7:98498329; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.S152F SNV missense/splice de novo Unknown COL3A1 chr2:189851792; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.V294I SNV missense de novo Benign GIF chr11:59603474; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.I237T SNV missense de novo Benign TEKT5 chr16:10783119; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.E605K SNV missense de novo Benign THBS1 chr15:39881442; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.V29I SNV missense de novo Benign PAG1 chr8:81905378; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.P518L SNV missense de novo Benign RGS12 chr4:3429844; absent in 1000 Genomes Project Damaging Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.G274S SNV missense de novo Benign SAP30BP chr17:73702542; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.S410N SNV missense de novo Benign ZNF530 chr19:58118122; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.N796S SNV missense de novo Benign MTOR chr1:11293489; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.A80V SNV missense de novo Benign INPP5A chr10:134463942; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.Y469H SNV missense de novo Benign EDEM2 chr20:33703457; absent in 1000 Genomes Project Tolerated Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European - SNV splice de novo - VPS35 chr16:46705610; absent in 1000 Genomes Project - Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European - SNV splice de novo - ADAMTS3 chr4:73185683; absent in 1000 Genomes Project - Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European p.L625N SNV missense de novo Probably damaging GPR115 chr6:47682855; absent in 1000 Genomes Project - Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European - Indel amino acid deletion de novo Damaging SPATA5 chr4:123855728; absent in 1000 Genomes Project - Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European - Indel frameshift deletion de novo Damaging RB1CC1 chr8:53568705; absent in 1000 Genomes Project - Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European - Indel frameshift deletion de novo Damaging LAMA2 chr6:129835668; absent in 1000 Genomes Project - Xu 2011 21822266 Agilent SureSelect Human All Exon Target Enrichment System Illumina paired-end 53 trios 22 trios proband diagnosed with schizophrenia with unaffected parents Sporadic family European - Indel frameshift deletion de novo Damaging ESAM chr11:124626163; absent in 1000 Genomes Project - Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R628C SNV missense NA benign KL chr13:33635098; 5/2780 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.G404R SNV missense NA Probably damaging ZNF554 chr19:2834443; 4/2780 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.H20R SNV missense NA benign EPB41L1 chr20:34782170; 4/2777 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Tolerated Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.T134M SNV missense NA Probably damaging RAB17 chr2:238485934; 4/2781 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.D624Y SNV missense NA Probably damaging TRPM2 chr21:45815372; 4/2780 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R194W SNV missense NA Probably damaging PCSK9 chr1:55518007; 3/2782 in cases; 0/2119 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R52X SNV nonsense NA - BCDO2 chr11:112050168; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort - Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R106H SNV missense NA - SLC1A2 chr11:35333962; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R97H SNV missense NA Probably damaging GPRC5A chr12:13061473; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European - SNV splice NA - SERINC4 chr15:44087935; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort - Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.Y179X SNV nonsense NA - C1QTNF8 chr16:1143723; 3/2777 in cases; 0/2120 in controls; 0/5368 in NHLBI Exome-Sequenced Cohort Tolerated Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R254H SNV missense NA Probably damaging STX4 chr16:31050920; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Tolerated Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.G2114R SNV missense NA Probably damaging HYDIN chr16:70986368; 3/2782 in cases; 0/2120 in controls; 0/4650 in NHLBI Exome-Sequenced Cohort Tolerated Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R170X SNV nonsense NA - KCNAB3 chr17:7829031; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Tolerated Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R138Q SNV missense NA Probably damaging YJEFN3 chr19:19645937; 3/2782 in cases; 0/2120 in controls; 0/5167 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.Q110X SNV nonsense NA - KIR3DL3 chr19:55349288; 3/2775 in cases; 0/2116 in controls; 0/5264 in NHLBI Exome-Sequenced Cohort - Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.E2833Q SNV missense NA Probably damaging BIRC6 chr2:32724726; 3/2758 in cases; 0/2091 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R707H SNV missense NA Probably damaging BOC chr3:112998770; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R109C SNV missense NA benign HHATL chr3:42739729; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.M2023L SNV missense NA Probably damaging ROS1 chr6:117638356; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.R305X SNV nonsense NA - GUSB chr7:65439688; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Tolerated Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.V2803I SNV missense NA - PCLO chr7:82581655; 3/2727 in cases; 0/2071 in controls; 0/5032 in NHLBI Exome-Sequenced Cohort Damaging Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.G723V SNV missense NA benign ABCB4 chr7:87053265; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Tolerated Need 2012 22863191 Agilent SureSelect Human All Exon Illumina GAII or HiSeq 166 + 2617 307 +1800 schziophrenia with treatment-resistant or strong family history Sporadic mainly African and European p.A1221D SNV missense NA Probably damaging ZNF804B chr7:88965958; 3/2782 in cases; 0/2120 in controls; 0/5379 in NHLBI Exome-Sequenced Cohort Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - KLHL17 chr1:899318 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - TMEM201 chr1:9661297 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - EPHA2 chr1:16458218 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R398X SNV missense de novo - NIPAL3 chr1:24795646 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV codon-insertion de novo - EPB41 chr1:29344918 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q934X SNV missense de novo - HIVEP3 chr1:42049410 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R803X SNV missense de novo - LPHN2 chr1:82433818 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R80X SNV missense de novo - TAF13 chr1:109607282 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - TAF13 chr1:109617626 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - MOV10 chr1:113242568 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - POGZ chr1:151377574 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - DARC chr1:159175611 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - PIK3C2B chr1:204438839 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - RASSF5 chr1:206757974 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV codon-deletion de novo - EML6 chr2:54952277 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R2884X SNV missense de novo - ALMS1 chr2:73717739 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y639X SNV missense de novo - NEB chr2:152548856 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV splice de novo - SCN2A chr2:166187838 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - TLK1 chr2:171902751 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - NCKIPSD chr3:48719561 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R38X SNV missense de novo - PHF7 chr3:52448529 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV splice de novo - CNTN3 chr3:74334644 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R119X SNV missense de novo - TRH chr3:129695685 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.W47X SNV missense de novo - PAQR9 chr3:142682039 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - YTHDC1 chr4:69202841 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV nonsense de novo - NIPBL chr5:37064898 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - ATG12 chr5:115173428 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV nonsense de novo - PCDHAC2 chr5:140346499 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - PRRC2A chr6:31605070 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.W65X SNV missense de novo - BTNL2 chr6:32372949 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K446X SNV missense de novo - UFL1 chr6:96990826 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - AKD1 chr6:109954110 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.W2788X SNV missense de novo - TNRC18 chr7:5415815 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R385X SNV missense de novo - DAGLB chr7:6452471 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV codon-insertion de novo - NUPL2 chr7:23221811 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - CLCN1 chr7:143013326 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - KIAA1429 chr8:95523667 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV codon-insertion de novo - ARRDC1 chr9:140509155 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - ZMYND11 chr10:294362 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R936X SNV missense de novo - ZEB1 chr10:31815671 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M1V SNV missense de novo - PSAP chr10:73610978 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y527X SNV missense de novo - CUZD1 chr10:124593258 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R372X SNV missense de novo - MKI67 chr10:129909975 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E648X SNV missense de novo - ZDHHC5 chr11:57466850 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV codon-deletion de novo - PCNXL3 chr11:65391969 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV splice de novo - DLG2 chr11:83194295 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.X488X SNV missense de novo - HSPA8 chr11:122929399 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - BCAT1 chr12:24989507 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV codon-insertion de novo - SLC4A8 chr12:51844742 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - SMARCC2 chr12:56566768 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - XPOT chr12:64841907 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R188X SNV missense de novo - EPYC chr12:91365717 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R374X SNV missense de novo - PSPC1 chr13:20356705 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV codon-insertion de novo - ITM2B chr13:48830432 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - KLHDC1 chr14:50159920 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - HSP90AA1 chr14:102550757 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - DUOXA2 chr15:45406827 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - VPS13C chr15:62266509 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - NR2E3 chr15:72104389 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV codon-deletion de novo - C17orf97 chr17:263585 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - DNAH9 chr17:11806168 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R166X SNV missense de novo - TP53I13 chr17:27899058 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV codon-deletion de novo - BAIAP2 chr17:79089626 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - ZNF407 chr18:72775784 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - GTPBP3 chr19:17450270 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E617X SNV missense de novo - ZNF607 chr19:38189180 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV splice de novo - MARK4 chr19:45800933 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - SHANK1 chr19:51171670 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K253X SNV missense de novo - MGME1 chr20:17968834 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV splice de novo - MYH7B chr20:33588493 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R368X SNV missense de novo - ITSN1 chr21:35144424 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - MIF chr22:24236689 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E1108X SNV missense de novo - TTC28 chr22:28497254 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian - SNV frameshift de novo - NAP1L2 chrX:72434103 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R351W SNV missense de novo Probably damaging DVL1 chr1:1274965 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.H743Y SNV missense de novo benign ESPN chr1:6512058 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T975I SNV missense de novo Probably damaging EMC1 chr1:19545852 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D708G SNV missense de novo Possibly damaging LUZP1 chr1:23418632 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V172M SNV missense de novo Probably damaging NIPAL3 chr1:24795646 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E533K SNV missense de novo Possibly damaging EXTL1 chr1:26360265 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R86W SNV missense de novo Probably damaging NR0B2 chr1:27240176 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A258G SNV missense de novo benign PTAFR chr1:28476760 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M104T SNV missense de novo Probably damaging YARS chr1:33276261 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M247T SNV missense de novo benign PHC2 chr1:33794548 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V440M SNV missense de novo benign PHC2 chr1:33820513 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D2110G SNV missense de novo benign CSMD2 chr1:34071483 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T272M SNV missense de novo benign CLSPN chr1:36228012 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V270M SNV missense de novo Probably damaging THRAP3 chr1:36752639 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I733M SNV missense de novo benign CCDC30 chr1:43119546 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S1585P SNV missense de novo Probably damaging PTPRF chr1:44085065 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V328I SNV missense de novo benign PIK3R3 chr1:46512257 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R199Q SNV missense de novo Possibly damaging TTC4 chr1:55194020 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P570L SNV missense de novo benign DNAJC6 chr1:65858354 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P372R SNV missense de novo Probably damaging LPHN2 chr1:82433818 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M300T SNV missense de novo Probably damaging LPAR3 chr1:85279692 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.C12S SNV missense de novo Probably damaging ZNF326 chr1:90463687 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R279W SNV missense de novo Possibly damaging RPL5 chr1:93307363 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G79S SNV missense de novo Possibly damaging MYBPHL chr1:109840239 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A277T SNV missense de novo benign SLC6A17 chr1:110719326 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I194S SNV missense de novo - PDE4DIP chr1:144931128 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L574S SNV missense de novo Probably damaging DCST1 chr1:155020573 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R164H SNV missense de novo benign ASH1L chr1:155452170 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R36C SNV missense de novo Probably damaging INSRR chr1:156824075 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R608C SNV missense de novo Probably damaging ARHGEF11 chr1:156918274 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V216A SNV missense de novo benign FCGR3B chr1:161594360 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T88I SNV missense de novo Possibly damaging PBX1 chr1:164532546 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R1555P SNV missense de novo Probably damaging PRRC2C chr1:171511275 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R226C SNV missense de novo Probably damaging KLHL20 chr1:173720981 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.N48S SNV missense de novo benign SOAT1 chr1:179304780 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T1720A SNV missense de novo Probably damaging TPR chr1:186303481 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D245G SNV missense de novo benign KIF14 chr1:200587118 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D979G SNV missense de novo benign CACNA1S chr1:201031189 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V83I SNV missense de novo Probably damaging PLEKHA6 chr1:204236636 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q31R SNV missense de novo Probably damaging PIK3C2B chr1:204438839 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.C408R SNV missense de novo Probably damaging NFASC chr1:204942490 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P539A SNV missense de novo Probably damaging CR1L chr1:207891009 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P850L SNV missense de novo Possibly damaging TLR5 chr1:223283825 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R233C SNV missense de novo Probably damaging NVL chr1:224482030 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P272S SNV missense de novo Probably damaging PRSS38 chr1:228033742 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R2280Q SNV missense de novo Possibly damaging OBSCN chr1:228465539 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M196V SNV missense de novo Probably damaging CAPN9 chr1:230903336 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A119G SNV missense de novo Possibly damaging TSNAX chr1:231678346 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L399M SNV missense de novo Possibly damaging ZP4 chr1:238048581 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A288V SNV missense de novo benign WDR64 chr1:241850816 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P449L SNV missense de novo benign CMPK2 chr2:6989985 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R595W SNV missense de novo Probably damaging GTF3C2 chr2:27552340 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E888G SNV missense de novo Probably damaging NRXN1 chr2:50724807 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A315T SNV missense de novo Probably damaging CTNNA2 chr2:80136810 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A169V SNV missense de novo Probably damaging ASTL chr2:96798410 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T591N SNV missense de novo benign CNNM3 chr2:97493918 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M381I SNV missense de novo benign SLC5A7 chr2:108626717 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y230H SNV missense de novo Probably damaging TMEM87B chr2:112838945 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R382T SNV missense de novo Probably damaging ZC3H6 chr2:113080284 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R36C SNV missense de novo Probably damaging IL36B chr2:113788640 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E11K SNV missense de novo Possibly damaging GLI2 chr2:121554927 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q1852R SNV missense de novo Possibly damaging RIF1 chr2:152321589 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R1113H SNV missense de novo Probably damaging TANC1 chr2:160074125 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.H214Q SNV missense de novo benign XIRP2 chr2:168067324 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L426F SNV missense de novo benign SLC25A12 chr2:172666145 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M275T SNV missense de novo benign CDCA7 chr2:174229647 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R2354H SNV missense de novo Probably damaging TTN chr2:179638834 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G1006E SNV missense de novo Probably damaging AOX1 chr2:201515866 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V1150I SNV missense de novo benign FN1 chr2:216262472 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D1729Y SNV missense de novo benign SPEG chr2:220344705 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E686Q SNV missense de novo Probably damaging CUL3 chr2:225339015 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T158M SNV missense de novo Probably damaging ITM2C chr2:231742167 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.N1709K SNV missense de novo Possibly damaging KIF1A chr2:241658510 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S809L SNV missense de novo Possibly damaging ITPR1 chr3:4715041 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R194Q SNV missense de novo Possibly damaging RPUSD3 chr3:9881966 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V1497I SNV missense de novo benign NUP210 chr3:13368735 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M84V SNV missense de novo benign LSM3 chr3:14239557 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R733H SNV missense de novo Possibly damaging STT3B chr3:31674437 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P49L SNV missense de novo Probably damaging ZNF445 chr3:44496896 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T375R SNV missense de novo benign LIMD1 chr3:45637495 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V1277M SNV missense de novo Probably damaging CELSR3 chr3:48694701 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R440Q SNV missense de novo Possibly damaging RAD54L2 chr3:51669785 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R357C SNV missense de novo Probably damaging ALAS1 chr3:52240671 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.W2385L SNV missense de novo Possibly damaging DNAH1 chr3:52409424 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P31S SNV missense de novo Possibly damaging PHF7 chr3:52448529 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G180E SNV missense de novo benign KCTD6 chr3:58487184 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T1105S SNV missense de novo Probably damaging PTPRG chr3:62258752 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.F283I SNV missense de novo Probably damaging GXYLT2 chr3:73004495 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E2599D SNV missense de novo Possibly damaging CRYBG3 chr3:97617822 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P316L SNV missense de novo benign TFG chr3:100467119 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.N489I SNV missense de novo Probably damaging ALCAM chr3:105269062 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q1439H SNV missense de novo Probably damaging KIAA2018 chr3:113376212 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M1401L SNV missense de novo benign PLXNA1 chr3:126741090 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E266K SNV missense de novo benign HPS3 chr3:148858887 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K299E SNV missense de novo Probably damaging SHOX2 chr3:157815881 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M729V SNV missense de novo benign PSMD2 chr3:184025295 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G357S SNV missense de novo Possibly damaging DLG1 chr3:196863463 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R198H SNV missense de novo benign ZNF721 chr4:437663 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.C482R SNV missense de novo benign PSAPL1 chr4:7435163 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S549G SNV missense de novo benign ZNF518B chr4:10446308 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y281C SNV missense de novo Probably damaging SULT1B1 chr4:70592855 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R929H SNV missense de novo Probably damaging ADAMTS3 chr4:73156717 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I35N SNV missense de novo benign PARM1 chr4:75937695 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P814T SNV missense de novo benign SEC31A chr4:83770019 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T657S SNV missense de novo Probably damaging GRID2 chr4:94411901 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S399L SNV missense de novo benign METTL14 chr4:119631282 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K146N SNV missense de novo Probably damaging MYOZ2 chr4:120085427 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L971S SNV missense de novo benign ANKRD50 chr4:125590983 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q859H SNV missense de novo Probably damaging FAT4 chr4:126240143 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L201M SNV missense de novo Probably damaging PCDH10 chr4:134071896 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G2898A SNV missense de novo Possibly damaging DCHS2 chr4:155155746 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A212T SNV missense de novo Possibly damaging CBR4 chr4:169911381 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q621H SNV missense de novo Probably damaging SORBS2 chr4:186544420 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A219T SNV missense de novo benign TLR3 chr4:187003495 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P1137H SNV missense de novo Probably damaging PDZD2 chr5:32074622 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I871V SNV missense de novo benign ZFR chr5:32385644 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T1075N SNV missense de novo benign ADAMTS6 chr5:64466464 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A243V SNV missense de novo Possibly damaging TAF9 chr5:68660837 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L560P SNV missense de novo Probably damaging SHROOM1 chr5:132159674 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V152M SNV missense de novo Probably damaging CD14 chr5:140012115 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L27M SNV missense de novo Possibly damaging CD14 chr5:140012490 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L575M SNV missense de novo Probably damaging SH3TC2 chr5:148407572 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L522P SNV missense de novo Probably damaging STK10 chr5:171517356 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R1045H SNV missense de novo benign NSD1 chr5:176638534 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A5V SNV missense de novo Probably damaging GFOD1 chr6:13365825 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G597S SNV missense de novo Probably damaging JARID2 chr6:15501497 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R369C SNV missense de novo benign ALDH5A1 chr6:24523085 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S39Y SNV missense de novo Possibly damaging HIST1H2BE chr6:26184139 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A34T SNV missense de novo Probably damaging HIST1H4I chr6:27107187 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.C124S SNV missense de novo Probably damaging FKBPL chr6:32097187 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D68N SNV missense de novo benign RGL2 chr6:33264213 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V316I SNV missense de novo benign C6orf222 chr6:36294377 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.H423Q SNV missense de novo benign KIF6 chr6:39513377 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T397S SNV missense de novo benign TFAP2D chr6:50740408 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G54S SNV missense de novo Probably damaging PAQR8 chr6:52268171 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L14W SNV missense de novo - RIMS1 chr6:72926932 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K408Q SNV missense de novo benign KCNQ5 chr6:73839517 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.H334N SNV missense de novo benign TTK chr6:80724195 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y1750C SNV missense de novo benign AKD1 chr6:109954110 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A1469T SNV missense de novo Probably damaging LAMA4 chr6:112443287 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R480C SNV missense de novo Probably damaging KIAA1244 chr6:138584058 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K1875R SNV missense de novo benign KIAA1244 chr6:138655607 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R2772C SNV missense de novo benign UTRN chr6:145073047 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E7077A SNV missense de novo Probably damaging SYNE1 chr6:152545708 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M1004T SNV missense de novo benign ARID1B chr6:157495166 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D469N SNV missense de novo benign AMZ1 chr7:2752420 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q642H SNV missense de novo benign FBXL18 chr7:5530936 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R103S SNV missense de novo benign CDCA7L chr7:21948018 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P300T SNV missense de novo Probably damaging SCRN1 chr7:29976179 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A37V SNV missense de novo Probably damaging NME8 chr7:37890249 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K119R SNV missense de novo benign YAE1D1 chr7:39611980 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R325C SNV missense de novo Possibly damaging GLI3 chr7:42079692 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T751M SNV missense de novo Probably damaging POM121C chr7:75051283 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G228D SNV missense de novo benign RUNDC3B chr7:87399950 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I1770F SNV missense de novo Possibly damaging AKAP9 chr7:91674467 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q128K SNV missense de novo benign PEX1 chr7:92147545 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D247A SNV missense de novo Probably damaging GNB2 chr7:100276061 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S2157T SNV missense de novo benign MUC17 chr7:100681167 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y1981C SNV missense de novo Probably damaging RELN chr7:103194134 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y395C SNV missense de novo Probably damaging C7orf60 chr7:112461833 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G6R SNV missense de novo benign C7orf60 chr7:112579790 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V235M SNV missense de novo benign SLC13A1 chr7:122787322 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D337G SNV missense de novo benign SND1 chr7:127347673 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T433I SNV missense de novo benign CCDC136 chr7:128446791 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R300W SNV missense de novo benign TAS2R3 chr7:141464856 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G1686C SNV missense de novo Probably damaging SSPO chr7:149489224 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S941A SNV missense de novo Probably damaging NOS3 chr7:150707820 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P1620L SNV missense de novo benign MLL3 chr7:151884496 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R77W SNV missense de novo Possibly damaging TNKS chr8:9413678 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R255G SNV missense de novo Possibly damaging XKR6 chr8:11058086 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E682G SNV missense de novo Possibly damaging XPO7 chr8:21849382 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R613Q SNV missense de novo benign FAM160B2 chr8:21959349 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K225E SNV missense de novo Probably damaging PTK2B chr8:27288396 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R232C SNV missense de novo Possibly damaging ESCO2 chr8:27634519 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.N336S SNV missense de novo Probably damaging KIF13B chr8:29025041 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.F896L SNV missense de novo benign TEX15 chr8:30703848 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S1146L SNV missense de novo Probably damaging WRN chr8:31004622 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S597R SNV missense de novo Probably damaging ANK1 chr8:41571683 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.F127V SNV missense de novo Possibly damaging TTPA chr8:63978636 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G87R SNV missense de novo Probably damaging XKR9 chr8:71593552 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A85V SNV missense de novo Probably damaging PI15 chr8:75737738 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V6A SNV missense de novo Possibly damaging FABP4 chr8:82395386 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K115R SNV missense de novo benign YWHAZ chr8:101937218 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A351T SNV missense de novo benign TRHR chr8:110131538 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A470G SNV missense de novo Probably damaging SQLE chr8:126030934 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A411S SNV missense de novo Probably damaging ASAP1 chr8:131140302 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G448R SNV missense de novo Probably damaging PUF60 chr8:144898899 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R2179Q SNV missense de novo benign EPPK1 chr8:144940886 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R214H SNV missense de novo Probably damaging TONSL chr8:145667733 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T78I SNV missense de novo benign RANBP6 chr9:6014319 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R175T SNV missense de novo benign HAUS6 chr9:19089470 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V463M SNV missense de novo Possibly damaging ACO1 chr9:32427337 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P207L SNV missense de novo Probably damaging PAX5 chr9:36966706 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D519E SNV missense de novo Probably damaging PRUNE2 chr9:79325633 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q2658H SNV missense de novo benign VPS13A chr9:79974304 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R189Q SNV missense de novo Probably damaging COL15A1 chr9:101748312 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q183L SNV missense de novo benign FSD1L chr9:108246745 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L272M SNV missense de novo Probably damaging ACTL7B chr9:111617397 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q402K SNV missense de novo benign PTPN3 chr9:112172670 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S1846T SNV missense de novo Possibly damaging COL27A1 chr9:117072928 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D501E SNV missense de novo benign PHF19 chr9:123620462 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G146R SNV missense de novo Probably damaging LHX6 chr9:124979560 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D37A SNV missense de novo Possibly damaging C9orf114 chr9:131591112 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R388C SNV missense de novo Probably damaging POMT1 chr9:134388705 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L98F SNV missense de novo Possibly damaging EGFL7 chr9:139564152 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R302L SNV missense de novo benign MAMDC4 chr9:139749099 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R109Q SNV missense de novo Possibly damaging EXD3 chr9:140267493 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A329D SNV missense de novo benign EPC1 chr10:32576192 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G171S SNV missense de novo Probably damaging MAPK8 chr10:49628258 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R252H SNV missense de novo benign LIPK chr10:90497477 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A138T SNV missense de novo Possibly damaging ANKRD22 chr10:90583123 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G368R SNV missense de novo Probably damaging ACTA2 chr10:90695012 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P1371S SNV missense de novo Probably damaging MYOF chr10:95107512 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A557V SNV missense de novo Probably damaging TM9SF3 chr10:98287002 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G34E SNV missense de novo benign POLL chr10:103347017 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R964H SNV missense de novo benign PDCD11 chr10:105184868 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G47D SNV missense de novo Probably damaging ACSL5 chr10:114154676 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V128M SNV missense de novo Probably damaging FAM160B1 chr10:116595383 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L1049V SNV missense de novo Possibly damaging MUC6 chr11:1024924 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R926Q SNV missense de novo Probably damaging MUC6 chr11:1025827 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P1935S SNV missense de novo benign MUC5B chr11:1263913 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R725C SNV missense de novo benign PDE3B chr11:14854346 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V507I SNV missense de novo benign IGSF22 chr11:18736991 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V188I SNV missense de novo Possibly damaging KIF18A chr11:28112982 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P20L SNV missense de novo Probably damaging KIF18A chr11:28119436 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T33M SNV missense de novo benign ACCSL chr11:44069684 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G907R SNV missense de novo Probably damaging LRP4 chr11:46903348 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R300W SNV missense de novo Probably damaging PTPRJ chr11:48146543 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R340W SNV missense de novo Probably damaging SMTNL1 chr11:57313454 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.F218L SNV missense de novo benign FADS2 chr11:61615666 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R335H SNV missense de novo Probably damaging SYVN1 chr11:64898233 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R98H SNV missense de novo Possibly damaging SPDYC chr11:64939751 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A899T SNV missense de novo Possibly damaging NUMA1 chr11:71725854 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A311G SNV missense de novo benign ARAP1 chr11:72423331 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R402Q SNV missense de novo benign GDPD5 chr11:75152811 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R496Q SNV missense de novo benign CAPN5 chr11:76831955 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M125V SNV missense de novo benign CLNS1A chr11:77336107 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S471L SNV missense de novo benign MAML2 chr11:95825783 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I8V SNV missense de novo Probably damaging CEP164 chr11:117209324 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G565R SNV missense de novo Probably damaging PHLDB1 chr11:118499232 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q473R SNV missense de novo benign HSPA8 chr11:122929444 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T429S SNV missense de novo benign HSPA8 chr11:122929804 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K33R SNV missense de novo Possibly damaging FOXRED1 chr11:126141344 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G218A SNV missense de novo - IQSEC3 chr12:234828 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y642F SNV missense de novo benign CD163L1 chr12:7548816 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.N454D SNV missense de novo Probably damaging CD163 chr12:7647737 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I149T SNV missense de novo Probably damaging SLCO1B7 chr12:21175889 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K182N SNV missense de novo Probably damaging STK38L chr12:27467465 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.N860S SNV missense de novo benign ARID2 chr12:46244485 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R26Q SNV missense de novo benign KRT82 chr12:52799985 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R428C SNV missense de novo Probably damaging ZC3H10 chr12:56515628 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T318M SNV missense de novo Probably damaging MDM1 chr12:68709981 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S673C SNV missense de novo Possibly damaging CEP290 chr12:88508231 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R121H SNV missense de novo benign IKBIP chr12:99008054 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I36V SNV missense de novo benign NUP37 chr12:102512191 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D817G SNV missense de novo Probably damaging ALDH1L2 chr12:105424168 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S73P SNV missense de novo benign TCP11L2 chr12:106708195 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.N74T SNV missense de novo Probably damaging TCP11L2 chr12:106708199 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K463E SNV missense de novo benign ANAPC5 chr12:121756326 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I65V SNV missense de novo benign PSPC1 chr13:20356705 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V931I SNV missense de novo Possibly damaging STARD13 chr13:33684161 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V564I SNV missense de novo benign NBEA chr13:35683436 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M208R SNV missense de novo Probably damaging HTR2A chr13:47409765 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I255L SNV missense de novo Probably damaging INTS6 chr13:51961614 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S1264L SNV missense de novo Probably damaging NALCN chr13:101733972 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L394V SNV missense de novo Probably damaging TINF2 chr14:24709311 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R1040W SNV missense de novo Probably damaging NYNRIN chr14:24884073 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.F92V SNV missense de novo Probably damaging C14orf28 chr14:45369912 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R197W SNV missense de novo Probably damaging ESR2 chr14:64735576 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.F505L SNV missense de novo benign PLEKHH1 chr14:68038547 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.H437R SNV missense de novo Probably damaging ACTN1 chr14:69352217 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K376E SNV missense de novo Possibly damaging DICER1 chr14:95590783 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T196M SNV missense de novo Probably damaging WARS chr14:100820162 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R370H SNV missense de novo Probably damaging AKT1 chr14:105239278 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I902F SNV missense de novo benign TRPM1 chr15:31327796 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V2205M SNV missense de novo Probably damaging RYR3 chr15:33999249 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I4730T SNV missense de novo Probably damaging RYR3 chr15:34151822 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D577N SNV missense de novo Probably damaging DLL4 chr15:41228914 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R277H SNV missense de novo Probably damaging INO80 chr15:41377610 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T2920A SNV missense de novo benign SPTBN5 chr15:42148742 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S73C SNV missense de novo Probably damaging DUOXA1 chr15:45413408 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I307V SNV missense de novo benign GNB5 chr15:52416801 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R123H SNV missense de novo Probably damaging CLPX chr15:65459114 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T1331I SNV missense de novo benign UACA chr15:70957083 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y655C SNV missense de novo Probably damaging CHSY1 chr15:101718038 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R103H SNV missense de novo Possibly damaging RHBDF1 chr16:113739 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R207C SNV missense de novo Probably damaging MPG chr16:135513 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K131E SNV missense de novo benign SOLH chr16:597229 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P158L SNV missense de novo benign DNASE1L2 chr16:2287532 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M78T SNV missense de novo benign CDIP1 chr16:4563705 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I1295T SNV missense de novo Probably damaging GRIN2A chr16:9857517 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D233N SNV missense de novo Probably damaging CLEC16A chr16:11066893 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E1137K SNV missense de novo Probably damaging MYH11 chr16:15829341 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E383K SNV missense de novo benign EEF2K chr16:22269932 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S368N SNV missense de novo benign COG7 chr16:23430055 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T169I SNV missense de novo benign TMEM219 chr16:29979496 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G491R SNV missense de novo Probably damaging TBC1D10B chr16:30370664 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R590H SNV missense de novo Probably damaging FBXL19 chr16:30958132 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V126G SNV missense de novo Probably damaging PYCARD chr16:31213117 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.W167R SNV missense de novo Probably damaging AKTIP chr16:53528433 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L36F SNV missense de novo Probably damaging NLRC5 chr16:57054730 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S975N SNV missense de novo Possibly damaging NLRC5 chr16:57074615 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I336L SNV missense de novo benign CDH5 chr16:66426075 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R461M SNV missense de novo Probably damaging CES4A chr16:67043035 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D91N SNV missense de novo Probably damaging DPEP2 chr16:68026532 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V426M SNV missense de novo Possibly damaging SLC7A6 chr16:68330536 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Q543R SNV missense de novo benign PMFBP1 chr16:72162581 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R136K SNV missense de novo benign CLEC3A chr16:78064707 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L549M SNV missense de novo Possibly damaging TAF1C chr16:84213434 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A157T SNV missense de novo benign COX4I1 chr16:85840439 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I489L SNV missense de novo benign FBXO31 chr16:87365049 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R913C SNV missense de novo Probably damaging SGSM2 chr17:2281220 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V53A SNV missense de novo benign ALOX15 chr17:4542904 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S1380R SNV missense de novo Probably damaging NLRP1 chr17:5418224 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V176M SNV missense de novo Possibly damaging FBXO39 chr17:6683713 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A625V SNV missense de novo Possibly damaging ARHGEF15 chr17:8222069 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R584Q SNV missense de novo benign NOS2 chr17:26097997 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R98Q SNV missense de novo benign TNFAIP1 chr17:26667422 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R1219H SNV missense de novo Probably damaging MYO18A chr17:27425968 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S601N SNV missense de novo Possibly damaging GIT1 chr17:27902699 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E493K SNV missense de novo Probably damaging SSH2 chr17:27963690 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E912D SNV missense de novo - SRCIN1 chr17:36707617 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E3K SNV missense de novo Probably damaging STAC2 chr17:37381749 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V1098I SNV missense de novo benign ERBB2 chr17:37883770 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E276K SNV missense de novo Possibly damaging KRT25 chr17:38907422 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T222I SNV missense de novo Probably damaging KRT20 chr17:39036479 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I167N SNV missense de novo Probably damaging KRT15 chr17:39673416 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E372D SNV missense de novo benign EFTUD2 chr17:42942362 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S1252N SNV missense de novo benign SPAG9 chr17:49048133 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S42R SNV missense de novo Possibly damaging CA10 chr17:50149689 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P1743R SNV missense de novo benign BZRAP1 chr17:56383196 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.K143Q SNV missense de novo benign MRC2 chr17:60742217 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A794V SNV missense de novo Probably damaging TANC2 chr17:61457099 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A556S SNV missense de novo benign KCNH6 chr17:61615590 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L295P SNV missense de novo Probably damaging CCDC47 chr17:61833664 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S162G SNV missense de novo benign SLC9A3R1 chr17:72758193 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R222C SNV missense de novo benign LLGL2 chr17:73559230 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L1223V SNV missense de novo Probably damaging TNRC6C chr17:76083048 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S110L SNV missense de novo Probably damaging CBX8 chr17:77769275 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.F486L SNV missense de novo benign BAIAP2 chr17:79089626 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L203P SNV missense de novo Probably damaging MYADML2 chr17:79899010 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T65A SNV missense de novo Probably damaging FN3KRP chr17:80676833 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P215A SNV missense de novo benign SMAD7 chr18:46474778 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T1160I SNV missense de novo Possibly damaging ZNF532 chr18:56651271 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.N605K SNV missense de novo Possibly damaging AP3D1 chr19:2117265 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R257W SNV missense de novo Probably damaging ZNF77 chr19:2934356 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G123A SNV missense de novo Probably damaging TBXA2R chr19:3600265 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E580D SNV missense de novo Probably damaging SAFB2 chr19:5598846 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.Y240F SNV missense de novo Probably damaging EMR1 chr19:6904119 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V182I SNV missense de novo Probably damaging EVI5L chr19:7914023 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E517K SNV missense de novo Probably damaging ADAMTS10 chr19:8657685 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G109E SNV missense de novo benign ZNF426 chr19:9641743 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V419L SNV missense de novo Possibly damaging FARSA chr19:13035281 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R70G SNV missense de novo Possibly damaging IER2 chr19:13264208 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R322Q SNV missense de novo Probably damaging ILVBL chr19:15230063 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R382C SNV missense de novo Probably damaging WIZ chr19:15536517 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L401V SNV missense de novo benign HAUS8 chr19:17160712 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M1256I SNV missense de novo benign UNC13A chr19:17738735 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S6L SNV missense de novo Possibly damaging KXD1 chr19:18672883 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R380L SNV missense de novo Probably damaging ZNF536 chr19:30935608 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P56L SNV missense de novo Possibly damaging MED29 chr19:39882166 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S553C SNV missense de novo Probably damaging SHKBP1 chr19:41096218 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L611V SNV missense de novo Possibly damaging AXL chr19:41758804 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R487H SNV missense de novo Probably damaging ERF chr19:42752804 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.H264R SNV missense de novo Probably damaging CIC chr19:42791987 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T639A SNV missense de novo benign ALDH16A1 chr19:49971767 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A2V SNV missense de novo Probably damaging TSKS chr19:50266500 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G143S SNV missense de novo benign LENG1 chr19:54660649 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G46E SNV missense de novo Probably damaging BRSK1 chr19:55798375 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.H290R SNV missense de novo benign ZNF551 chr19:58198596 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G269R SNV missense de novo Probably damaging ZBTB45 chr19:59028236 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.M103I SNV missense de novo Probably damaging CHMP2A chr19:59063665 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A382T SNV missense de novo Possibly damaging ZNF133 chr20:18296642 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T214M SNV missense de novo Probably damaging ABHD12 chr20:25290190 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T4K SNV missense de novo Probably damaging DUSP15 chr20:30450489 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T1267N SNV missense de novo benign ASXL1 chr20:31024315 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L534V SNV missense de novo benign FAM83C chr20:33874982 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.E634K SNV missense de novo Probably damaging EPB41L1 chr20:34797641 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T556M SNV missense de novo Probably damaging TGM2 chr20:36760851 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G517R SNV missense de novo benign SULF2 chr20:46300969 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I229V SNV missense de novo Probably damaging DPM1 chr20:49551767 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R970Q SNV missense de novo Probably damaging TSHZ2 chr20:51872915 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I119T SNV missense de novo Possibly damaging SLMO2 chr20:57611545 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R123H SNV missense de novo benign C20orf197 chr20:58645950 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S371L SNV missense de novo Probably damaging GTPBP5 chr20:60776024 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P381L SNV missense de novo Probably damaging ADAMTS1 chr21:28214245 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S2204N SNV missense de novo benign URB1 chr21:33688800 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I196L SNV missense de novo benign IFNAR2 chr21:34625012 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G1319A SNV missense de novo benign SON chr21:34925493 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R541H SNV missense de novo Possibly damaging TSPEAR chr21:45947268 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G484R SNV missense de novo Probably damaging COL6A2 chr21:47541029 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R1855G SNV missense de novo Probably damaging PCNT chr21:47831550 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.T258R SNV missense de novo Possibly damaging CCT8L2 chr22:17072668 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A968V SNV missense de novo benign CABIN1 chr22:24479335 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R1535C SNV missense de novo Probably damaging MYO18B chr22:26291182 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P602Q SNV missense de novo Possibly damaging EIF4ENIF1 chr22:31844182 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.G206E SNV missense de novo Possibly damaging APOL5 chr22:36122732 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.V1285M SNV missense de novo Possibly damaging MYH9 chr22:36714348 - Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.P886A SNV missense de novo benign EP300 chr22:41546041 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.D189G SNV missense de novo Probably damaging CERK chr22:47106986 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.L216H SNV missense de novo benign ARSE chrX:2867552 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R296C SNV missense de novo Probably damaging TLR7 chrX:12904513 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S290R SNV missense de novo Possibly damaging DMD chrX:32716053 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R289H SNV missense de novo Probably damaging TSPYL2 chrX:53113785 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R4237C SNV missense de novo Probably damaging HUWE1 chrX:53561599 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.A326G SNV missense de novo Probably damaging HUWE1 chrX:53655840 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.I52N SNV missense de novo benign MAGT1 chrX:77150849 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.C279R SNV missense de novo benign NXF3 chrX:102337238 Tolerated Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.R529C SNV missense de novo Probably damaging ACSL4 chrX:108904872 Damaging Fromer 2014 24463507 Agilent + NimbleGen array Illumina HiSeq paired-end sequencing 623 trios - - Sporadic family Bulgarian p.S84N SNV missense de novo benign HTATSF1 chrX:135581821 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V294I SNV missense de novo - GIF chr11:59603474 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.C13S SNV missense de novo Probably damaging PLCL2 chr3:17051253 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-donor_7 de novo - VPS35 chr16:46705610 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A68V SNV missense de novo Possibly damaging VN1R4 chr19:53770716 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.T256S SNV missense de novo benign MAGEC1 chrX:140993957 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V489L SNV missense de novo benign RFX3 chr9:3263075 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Gln1001HisfsX47 indel framshift(insertion) de novo - KIAA0467 chr1:43891777 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.W191S SNV missense de novo benign HLA-C chr6:31238897 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.I237T SNV missense de novo - TEKT5 chr16:10783119 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R1081H SNV missense de novo Probably damaging WDR11 chr10:122664879 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A1717D SNV missense de novo - UBR5 chr8:103298653 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.G198D SNV missense de novo benign PPP1R14D chr15:41107855 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Y1740H SNV missense de novo - LCT chr2:136548345 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.E605K SNV missense de novo benign THBS1 chr15:39881442 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.G539R SNV missense de novo Probably damaging DPYD chr1:97981407 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/canonical splice-donor_2 de novo - CELF2 chr10:11356223 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V122M SNV missense de novo benign TEP1 chr14:20876235 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/canonical splice-acceptor_-1 de novo - SYNGAP1 chr6:33414351 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.G202R SNV missense de novo Probably damaging OR4C46 chr11:51515885 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Lys186GlufsX9 indel framshift(deletion) de novo - HIST1H1E chr6:26157173 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V29I SNV missense de novo benign PAG1 chr8:81905378 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.E719K SNV missense de novo - IRS1 chr2:227661300 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-donor_-6 de novo - COG1 chr17:71196155 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-acceptor_-3 de novo - ADAMTS3 chr4:73185683 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - indel No_frameshift (deletion) de novo - SPATA5 chr4:123855728 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.L32M SNV missense de novo Probably damaging UGT1A3 chr2:234637866 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.G231S SNV missense de novo - NPRL2 chr3:50385987 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Y147C SNV missense de novo - FAM3D chr3:58622886 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Asp350_Glu351del indel No_frameshift(deletion) de novo - TAF7L chrX:100531413 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Glu1228ThrfsX7 indel framshift(deletion) de novo - RB1CC1 chr8:53568705 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.P407L SNV missense de novo - CSPG4 chr15:75982186 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Ser447GlyfsX3 indel framshift(deletion) de novo - DDHD2 chr8:38107312 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R417S SNV missense de novo Possibly damaging INTS10 chr8:19688027 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-donor_10 de novo - KRT4 chr12:53204530 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.S332C SNV missense de novo Probably damaging KLF12 chr13:74289537 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.I295F SNV missense de novo Probably damaging TRRAP chr7:98498329 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A1180T SNV missense de novo benign SYNM chr15:99673042 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R57K SNV missense de novo Possibly damaging TUB chr11:8061206 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.E254K SNV missense de novo - PHF23 chr17:7139486 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.L3217P SNV missense de novo benign AHNAK2 chr14:105412138 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.S1020G SNV missense de novo Probably damaging ADCY7 chr16:50349011 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R217W SNV missense de novo - PITPNM1 chr11:67267884 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.T102I SNV missense de novo - GPR153 chr1:6314661 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.P1120L SNV missense de novo benign RGS12 chr4:3429844 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.P223S SNV missense de novo benign PAPPA2 chr1:176526125 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Val56ArgfsX48 indel framshift(insertion) de novo - ESAM chr11:124626163 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.G104C SNV missense de novo - CLIC5 chr6:46047670 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.T75M SNV missense de novo Probably damaging PML chr15:74290439 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R26C SNV missense de novo Probably damaging P2RY2 chr11:72945280 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A54G SNV missense de novo - C16orf62 chr16:19566945 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.F416L SNV missense de novo benign DHX8 chr17:41573584 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-donor_3 de novo - COMMD9 chr11:36297684 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Y170C SNV missense de novo Possibly damaging ACOT6 chr14:74086428 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.G290S SNV missense de novo Probably damaging SAP30BP chr17:73702542 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R1105W SNV missense de novo Probably damaging ZBTB40 chr1:22850725 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-acceptor_-3 de novo - LAMA2 chr6:129687361 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Glu122del indel No_frameshift(deletion) de novo - SMCHD1 chr6:27101212 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.S238L SNV missense de novo - FAM13C chr10:61029749 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R490C SNV missense de novo Probably damaging HMGCR chr5:74650427 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R134Q SNV missense de novo - SPATA22 chr17:3352372 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.E1334X SNV Nonsense de novo - URB2 chr1:229783350 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.L110P SNV missense de novo - STAC2 chr17:37374188 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V4900M SNV missense de novo - MUC5B chr11:1272808 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A683V SNV missense de novo Probably damaging SLC4A8 chr12:51868866 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R98W SNV missense de novo - TREM2 chr6:41129100 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A983V SNV missense de novo benign DAB2IP chr9:124536603 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.M112V SNV missense de novo benign ABCG4 chr11:119024831 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Q484E SNV missense de novo benign MYH10 chr17:8445550 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.D305V SNV missense de novo Probably damaging RRP1B chr21:45104456 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R472Q SNV missense de novo - TOP3B chr22:22316911 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A40T SNV missense de novo benign SPIB chr19:50925796 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.S3309F SNV missense de novo Probably damaging BIRC6 chr2:32733272 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.N46D SNV missense de novo - CYTH1 chr17:76704313 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.E78D SNV missense de novo benign ARHGEF38 chr4:106510442 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/canonical splice-acceptor_-1 de novo - BRPF1 chr3:9786691 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R81H SNV missense de novo - H2AFV chr7:44875211 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V138M SNV missense de novo Probably damaging AP2A2 chr11:972194 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.S410N SNV missense de novo Possibly damaging ZNF530 chr19:58118122 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R665S SNV missense de novo benign TGM6 chr20:2413163 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.E617K SNV missense de novo - SLC26A8 chr6:35927251 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.S299N SNV missense de novo benign SMAP2 chr1:40882500 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.I248F SNV missense de novo benign LARP7 chr4:113568450 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.I389F SNV missense de novo Probably damaging BCORL1 chrX:129147913 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.L625H DNV missense de novo - GPR115 chr6:47682854 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.N796S SNV missense de novo - MTOR chr1:11293489 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.N105S SNV missense de novo - CCDC108 chr2:219900235 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V1284F SNV missense de novo Probably damaging UNC13C chr15:54586124 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R327H SNV missense de novo - SLC19A2 chr1:169439252 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.P41S SNV missense de novo benign FBXO7 chr22:32875203 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.H678R SNV missense de novo Probably damaging TRAK1 chr3:42261055 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R341Q SNV missense de novo - RASGRP1 chr15:38800147 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.K209X SNV Nonsense de novo - RARG chr12:53608241 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A328S SNV missense de novo - EVC2 chr4:5642489 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R328W SNV missense de novo benign ZNF229 chr19:44933974 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.N322I SNV missense de novo Probably damaging UBQLN1 chr9:86292782 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A413G SNV missense de novo Probably damaging FASTKD5 chr20:3128479 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.S152F SNV missense de novo Possibly damaging COL3A1 chr2:189851792 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Ile592AlafsX13 indel framshift(insertion) de novo - XPR1 chr1:180843041 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.P388R SNV missense de novo Probably damaging DGCR2 chr22:19028681 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-donor_7 de novo - PLK3 chr1:45269925 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Ser3050ThrfsX27 indel framshift(deletion) de novo - LAMA2 chr6:129835668 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A80V SNV missense de novo benign INPP5A chr10:134463942 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Y469H SNV missense de novo - EDEM2 chr20:33703457 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-acceptor_6 de novo - DOCK1 chr10:128840894 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.S21R SNV missense de novo benign PLA2G12B chr10:74714381 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-donor_6 de novo - TRRAP chr7:98564791 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.D170N SNV missense de novo - AC040977.1 chr17:6920327 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Q34X SNV Nonsense de novo - SSBP3 chr1:54870560 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A33V SNV missense de novo - SSBP3 chr1:54870562 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V177I SNV missense de novo benign GPRIN3 chr4:90170733 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.I466T SNV missense de novo Probably damaging TBC1D14 chr4:7008404 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/canonical splice-donor_1 de novo - NLRC5 chr16:57095444 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R59K SNV missense de novo benign C1orf185 chr1:51584391 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.D506Y SNV missense de novo - FCGBP chr19:40430427 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Y4950D SNV missense de novo Probably damaging KIAA1109 chr4:123283232 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A227T SNV missense de novo Probably damaging GNAO1 chr16:56370728 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.M287I SNV missense de novo benign SLC17A1 chr6:25813095 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Gln17ValfsX6 indel framshift(deletion) de novo - CCDC39 chr3:180334391 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.A514S SNV missense de novo benign PRKCB chr16:24196438 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R200S SNV missense de novo - PSG2 chr19:43579615 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.T223S SNV missense de novo Probably damaging STAG1 chr3:136240064 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/canonical splice-acceptor_-2 de novo - PRDX6 chr1:173450463 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.P80S SNV missense de novo benign IGFL2 chr19:46664002 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R4033W SNV missense de novo Probably damaging MACF1 chr1:39904999 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.K112E SNV missense de novo benign CEACAM18 chr19:51983685 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R121L SNV missense de novo Probably damaging ANO9 chr11:432043 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.D238N SNV missense de novo benign ARHGEF10 chr8:1824769 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R69Q SNV missense de novo Probably damaging RECK chr9:36058870 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R461X SNV Nonsense de novo - NUP54 chr4:77038831 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R1214Q SNV missense de novo Possibly damaging PTPRM chr18:8379193 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R790C SNV missense de novo - VPS39 chr15:42454322 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Ile171SerfsX8 indel framshift(deletion) de novo - KDM5C chrX:53245325 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Y80H SNV missense de novo - CIT chr12:120306864 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-acceptor_-3 de novo - C2CD3 chr11:73811724 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R120H SNV missense de novo benign IFT81 chr12:110566865 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.W621X SNV Nonsense de novo - DPYD chr1:97915657 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - splice/consensus splice-donor_8 de novo - VPS39 chr15:42479948 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V93A SNV missense de novo - HECTD1 chr14:31647323 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.T574K SNV missense de novo - DSCAM chr21:41710090 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.Y22X SNV Nonsense de novo - STAP2 chr19:4338685 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.K410E SNV missense de novo Possibly damaging DDX10 chr11:108577470 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.K430N SNV missense de novo benign CARD6 chr5:40852724 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R288W SNV missense de novo Probably damaging CAMK4 chr5:110818516 Damaging Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.K210R SNV missense de novo benign CANX chr5:179136974 Tolerated Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.E790K SNV missense de novo - IFT140 chr16:1607967 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.R404Q SNV missense de novo Possibly damaging HTR7 chr10:92508680 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.V282A SNV missense de novo Probably damaging CCDC84 chr11:118886056 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.S552F SNV missense de novo Probably damaging MBTPS1 chr16:84104320 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) p.L380M SNV missense de novo Probably damaging EMR3 chr19:14752341 - Xu 2012 23042115 Agilent SureSelect v2 + NimbleGen SeqCap EZ v2 Illumina HiSeq 2000 231 trios 34 trios absence of disease in first- or second degree relatives Sporadic family European (from South Africa and America) - Indel No_frameshift (deletion) de novo - ITGA6 chr2:173368885 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L208fs Indel frameshift_variant NA - PLEKHN1 chr1:906272 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D356H SNV missense NA Probably damaging PLEKHN1 chr1:907712 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter381LextX? SNV stop_lost NA - C1orf159 chr1:1018274 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P275fs Indel frameshift_variant NA - C1orf159 chr1:1019518 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G196fs Indel frameshift_variant NA - B3GALT6 chr1:1168239 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R197fs Indel frameshift_variant NA - B3GALT6 chr1:1168246 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P73A SNV missense NA Probably damaging AURKAIP1 chr1:1309661 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E794X SNV stop_gained NA - C1orf222 chr1:1854546 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I78N SNV missense NA Probably damaging GABRD chr1:1956824 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter453SextX? SNV stop_lost NA Probably damaging GABRD chr1:1961720 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q64X SNV stop_gained NA - PRKCZ chr1:2066750 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SKI chr1:2237457 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W43R SNV missense NA Probably damaging MORN1 chr1:2321385 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T161M SNV missense NA Probably damaging RER1 chr1:2333762 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W401X SNV stop_gained NA - TP73 chr1:3649316 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y85X SNV stop_gained NA - RPL22 chr1:6246864 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RPL22 chr1:6257818 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R8fs Indel frameshift_variant NA - HES3 chr1:6304438 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R8H SNV missense NA Probably damaging HES3 chr1:6304448 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E350fs Indel frameshift_variant NA - ACOT7 chr1:6324752 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - ACOT7 chr1:6341341 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A105T SNV missense NA Probably damaging ACOT7 chr1:6399628 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA Probably damaging ACOT7 chr1:6409921 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K53N SNV missense NA Probably damaging HES2 chr1:6479383 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E45fs Indel frameshift_variant NA - VAMP3 chr1:7837273 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L188P SNV missense NA Probably damaging GPR157 chr1:9171369 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y285X SNV stop_gained NA - C1orf127 chr1:11015167 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - MTOR-AS1 chr1:11204723 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S69fs Indel frameshift_variant NA - UBIAD1 chr1:11333788 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L251P SNV missense NA Probably damaging UBIAD1 chr1:11345923 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G252_A253insARRG Indel disruptive_inframe_insertion NA - PTCHD2 chr1:11561791 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y619fs Indel frameshift_variant NA - PTCHD2 chr1:11577621 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R417fs Indel frameshift_variant NA - PRAMEF6 chr1:13109019 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I185fs Indel frameshift_variant NA - PRDM2 chr1:14099610 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R736W SNV missense NA Probably damaging PRDM2 chr1:14106496 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R1609W SNV missense NA Probably damaging PRDM2 chr1:14109115 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W229R SNV missense NA Probably damaging CTRC chr1:15772137 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R193H SNV missense NA Probably damaging CASP9 chr1:15833446 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A118D SNV missense NA Probably damaging SLC25A34 chr1:16063333 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G304S SNV missense NA Probably damaging FBXO42 chr1:16579602 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P173S SNV missense NA Probably damaging FBXO42 chr1:16583240 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D30N SNV missense NA - SZRD1 chr1:16719769 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T700fs Indel frameshift_variant NA - TAS1R2 chr1:19166501 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TAS1R2 chr1:19168222 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N326I SNV missense NA Probably damaging AKR7A2 chr1:19630822 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y173S SNV missense NA Probably damaging AKR7A2 chr1:19634725 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y411C SNV missense NA Probably damaging TMCO4 chr1:20063897 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E339D SNV missense NA Probably damaging TMCO4 chr1:20067295 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S242L SNV missense NA Probably damaging TMCO4 chr1:20072981 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P107R SNV missense NA Probably damaging TMCO4 chr1:20097835 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y29fs Indel frameshift_variant NA - FAM43B chr1:20879547 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R411W SNV missense NA Probably damaging DDOST chr1:20979012 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - CDC42 chr1:22405075 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D75N SNV missense NA Probably damaging ID3 chr1:23885695 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R307C SNV missense NA Probably damaging FUCA1 chr1:24180900 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S483fs Indel frameshift_variant NA - IL22RA1 chr1:24447571 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R326del Indel disruptive_inframe_deletion NA - SRRM1 chr1:24979453 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K826fs Indel frameshift_variant NA - SRRM1 chr1:24997911 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y401X SNV stop_gained NA - RHD chr1:25648429 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q26X SNV stop_gained NA - PAQR7 chr1:26190255 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R163X SNV stop_gained NA - PDIK1L chr1:26448529 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M225K SNV missense NA Probably damaging PDIK1L chr1:26448716 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A102V SNV missense NA Probably damaging ZNF593 chr1:26497107 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G136D SNV missense NA - ZNF593 chr1:26497115 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T73fs Indel frameshift_variant NA - C1orf172 chr1:27278655 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P18fs Indel frameshift_variant NA - FCN3 chr1:27701258 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D87N SNV missense NA Probably damaging PPP1R8 chr1:28165351 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - ATPIF1 chr1:28562696 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A147D SNV missense NA Probably damaging TAF12 chr1:28931894 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H71fs Indel frameshift_variant NA - GMEB1 chr1:29016668 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T326fs Indel frameshift_variant NA - YTHDF2 chr1:29069755 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H466R SNV missense NA Probably damaging YTHDF2 chr1:29070179 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - MECR chr1:29520545 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E326X SNV stop_gained NA - MECR chr1:29520680 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C263Y SNV missense NA Probably damaging MECR chr1:29527070 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - IQCC chr1:32671753 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q161X SNV stop_gained NA - IQCC chr1:32672164 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R34L SNV missense NA Probably damaging HDAC1 chr1:32768273 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging HDAC1 chr1:32768335 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S69R SNV missense NA Probably damaging HDAC1 chr1:32782310 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R323X SNV stop_gained NA - SYNC chr1:33160732 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M587fs Indel frameshift_variant NA - RNF19B chr1:33402845 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S404X SNV stop_gained NA - ZNF362 chr1:33764595 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L419fs Indel frameshift_variant NA - ZNF362 chr1:33764633 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G385R SNV missense NA Probably damaging COL8A2 chr1:36564129 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G162fs Indel frameshift_variant NA Probably damaging COL8A2 chr1:36564798 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging COL8A2 chr1:36565650 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I12fs Indel frameshift_variant NA - LSM10 chr1:36859696 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R263X SNV stop_gained NA - DNALI1 chr1:38027826 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L136del Indel disruptive_inframe_deletion NA - C1orf122 chr1:38274730 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P2S SNV missense NA Probably damaging NDUFS5 chr1:39494400 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R275X SNV stop_gained NA - COL9A2 chr1:40775633 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G208R SNV missense NA Probably damaging COL9A2 chr1:40776773 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E171fs Indel frameshift_variant NA - EXO5 chr1:40980723 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H289fs Indel frameshift_variant NA - ZNF684 chr1:41012856 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R219C SNV missense NA Probably damaging KCNQ4 chr1:41284299 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R219H SNV missense NA Probably damaging KCNQ4 chr1:41284300 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y556X SNV stop_gained NA - KCNQ4 chr1:41300693 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M615_R618del Indel inframe_deletion NA - KCNQ4 chr1:41303431 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - KCNQ4 chr1:41303468 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I318fs Indel frameshift_variant NA - CCDC30 chr1:43042783 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q412fs Indel frameshift_variant NA - CCDC30 chr1:43055003 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - CCDC30 chr1:43103048 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L720fs Indel frameshift_variant NA - CCDC30 chr1:43119503 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q777X SNV stop_gained NA - CCDC30 chr1:43119676 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L71R SNV missense NA Probably damaging CLDN19 chr1:43205523 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W27X SNV stop_gained NA - TMEM125 chr1:43738474 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R175fs Indel frameshift_variant NA - ARTN chr1:44402239 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I109N SNV missense NA Probably damaging IPO13 chr1:44415330 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A328P SNV missense NA Probably damaging DPH2 chr1:44437556 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T154M SNV missense NA Probably damaging ERI3 chr1:44804745 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R306L SNV missense NA Probably damaging RNF220 chr1:45098025 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A434T SNV missense NA Probably damaging RNF220 chr1:45110743 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E95X SNV stop_gained NA - TMEM53 chr1:45120782 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R300X SNV stop_gained NA - PLK3 chr1:45268775 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y478X SNV stop_gained NA - PLK3 chr1:45270102 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PLK3 chr1:45270320 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F326L SNV missense NA Probably damaging HPDL chr1:45793796 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S215P SNV missense NA Probably damaging AKR1A1 chr1:46034247 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K240N SNV missense NA Probably damaging AKR1A1 chr1:46034324 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S446fs Indel frameshift_variant NA - LRRC41 chr1:46751193 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A356E SNV missense NA Probably damaging FAAH chr1:46874246 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P168fs Indel frameshift_variant NA - DMBX1 chr1:46976756 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S337fs Indel frameshift_variant NA - DMBX1 chr1:46978020 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - EFCAB14 chr1:47181966 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P254L SNV missense NA Probably damaging SPATA6 chr1:48865042 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A223fs Indel frameshift_variant NA - BEND5 chr1:49224649 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R1120C SNV missense NA Probably damaging NRD1 chr1:52256219 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F1070V SNV missense NA Probably damaging NRD1 chr1:52256619 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging NRD1 chr1:52277665 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P315L SNV missense NA Probably damaging NRD1 chr1:52299815 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SCP2 chr1:53446216 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SCP2 chr1:53446217 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - SCP2 chr1:53513556 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G539fs Indel frameshift_variant NA - GLIS1 chr1:53974883 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L27R SNV missense NA Probably damaging TTC22 chr1:55266757 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E315fs Indel frameshift_variant NA - BSND chr1:55474276 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y12fs Indel frameshift_variant NA - FGGY chr1:59787254 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P98L SNV missense NA Probably damaging FGGY chr1:59805721 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G138A SNV missense NA Probably damaging FGGY chr1:59812018 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G138E SNV missense NA Probably damaging FGGY chr1:59812018 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H345R SNV missense NA Probably damaging FGGY chr1:60091682 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E390fs Indel frameshift_variant NA - L1TD1 chr1:62675611 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N70delinsKY Indel disruptive_inframe_insertion NA - USP1 chr1:62907196 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y143X SNV stop_gained NA - USP1 chr1:62908862 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M583R SNV missense NA Probably damaging USP1 chr1:62916042 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y271fs Indel frameshift_variant NA - FOXD3 chr1:63789541 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R351fs Indel frameshift_variant NA - EFCAB7 chr1:64017495 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L204fs Indel frameshift_variant NA - RAVER2 chr1:65243596 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K510fs Indel frameshift_variant NA - RAVER2 chr1:65273003 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter860SextX? SNV stop_lost NA - SGIP1 chr1:67208777 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - INSL5 chr1:67263929 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C41S SNV missense NA Probably damaging INSL5 chr1:67266784 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q343X SNV stop_gained NA - C1orf141 chr1:67558864 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter230RextX? SNV stop_lost NA - DIRAS3 chr1:68512293 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S348del Indel disruptive_inframe_deletion NA - SRSF11 chr1:70715653 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R359W SNV missense NA - SRSF11 chr1:70715687 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - HHLA3 chr1:70832222 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y7X SNV stop_gained NA - PTGER3 chr1:71513240 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C15S SNV missense NA Possibly damaging ZRANB2 chr1:71546635 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q84X SNV stop_gained NA - FPGT chr1:74665476 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M201fs Indel frameshift_variant NA - TYW3 chr1:75229617 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R263X SNV stop_gained NA - AK5 chr1:77806149 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y64H SNV missense NA Probably damaging DNAJB4 chr1:78470984 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R307H SNV missense NA Probably damaging DNAJB4 chr1:78481837 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G308fs Indel frameshift_variant NA Probably damaging DNAJB4 chr1:78481838 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M37V SNV missense NA Probably damaging PTGFR chr1:78958537 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C186R SNV missense NA Probably damaging PTGFR chr1:78958984 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S838X SNV stop_gained NA - TTLL7 chr1:84348676 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - TTLL7 chr1:84386767 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SPATA1 chr1:85014469 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R376X SNV stop_gained NA - SSX2IP chr1:85122120 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S167fs Indel frameshift_variant NA - BCL10 chr1:85733512 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K267N SNV missense NA Probably damaging DDAH1 chr1:85787192 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L430S SNV missense NA Probably damaging ZNHIT6 chr1:86123613 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S425fs Indel frameshift_variant NA Probably damaging ZNHIT6 chr1:86123628 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N325fs Indel frameshift_variant NA Probably damaging ZNHIT6 chr1:86167882 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T349fs Indel frameshift_variant NA - ODF2L chr1:86836711 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G147E SNV missense NA Probably damaging CLCA4 chr1:87026033 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C308R SNV missense NA Probably damaging CLCA4 chr1:87031671 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R246H SNV missense NA Possibly damaging SH3GLB1 chr1:87200775 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T254A SNV missense NA Probably damaging HS2ST1 chr1:87569188 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - RP5-1052I5.2 chr1:87599400 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K784fs Indel frameshift_variant NA - PKN2 chr1:89289993 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N391fs Indel frameshift_variant NA - GBP4 chr1:89655743 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L272P SNV missense NA Probably damaging GBP4 chr1:89657045 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E105X SNV stop_gained NA - GBP6 chr1:89835227 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N300fs Indel frameshift_variant NA - ZNF326 chr1:90478762 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R320P SNV missense NA Probably damaging ZNF326 chr1:90482908 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K348E SNV missense NA Probably damaging ZNF326 chr1:90482991 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R404H SNV missense NA Probably damaging FNBP1L chr1:94009710 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T591M SNV missense NA Probably damaging FNBP1L chr1:94016624 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q206fs Indel frameshift_variant NA - GCLM chr1:94360209 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D306dup Indel disruptive_inframe_insertion NA - CNN3 chr1:95363367 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K46N SNV missense NA Probably damaging TMEM56 chr1:95609595 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T178I SNV missense NA - LPPR5 chr1:99418714 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L174F SNV missense NA Probably damaging SLC35A3 chr1:100472641 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y306C SNV missense NA Probably damaging SLC35A3 chr1:100483275 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter368YextX? SNV stop_lost NA Probably damaging SLC35A3 chr1:100488032 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G353R SNV missense NA Probably damaging DBT chr1:100672153 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G68X SNV stop_gained NA - RTCA chr1:100733724 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L191S SNV missense NA - RTCA chr1:100740439 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - DPH5 chr1:101456103 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TAF13 chr1:109618542 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D251_Q254del Indel disruptive_inframe_deletion NA - SYPL2 chr1:110022085 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y138fs Indel frameshift_variant NA - GSTM2 chr1:110213956 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q41X SNV stop_gained NA - UBL4B chr1:110655277 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A156fs Indel frameshift_variant NA - RBM15 chr1:110882488 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y416fs Indel frameshift_variant NA - RBM15 chr1:110883273 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G918R SNV missense NA Probably damaging RBM15 chr1:110884779 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S355P SNV missense NA Probably damaging KCNA10 chr1:111060347 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C234F SNV missense NA Probably damaging KCNA10 chr1:111060709 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C234R SNV missense NA Probably damaging KCNA10 chr1:111060710 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - RAP1A chr1:112246971 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A80fs Indel frameshift_variant NA - DDX20 chr1:112298782 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CAPZA1 chr1:113189830 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - RHOC chr1:113245298 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - RHOC chr1:113246263 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T61I SNV missense NA - RP11-426L16.10 chr1:113253445 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E47D SNV missense NA Probably damaging FAM19A3 chr1:113265663 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C71Y SNV missense NA Probably damaging FAM19A3 chr1:113265734 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R56C SNV missense NA Probably damaging BCL2L15 chr1:114429242 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V192D SNV missense NA Probably damaging HIPK1 chr1:114483580 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P988S SNV missense NA Probably damaging HIPK1 chr1:114512768 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C230W SNV missense NA Probably damaging SYT6 chr1:114680498 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter72YextX? SNV stop_lost NA Probably damaging SYT6 chr1:114682450 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R795Q SNV missense NA Probably damaging CSDE1 chr1:115261337 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L556S SNV missense NA Probably damaging CSDE1 chr1:115268943 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V252del Indel disruptive_inframe_deletion NA Probably damaging CSDE1 chr1:115276703 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D31fs Indel frameshift_variant NA - SIKE1 chr1:115323137 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T282fs Indel frameshift_variant NA - ATP1A1 chr1:116932148 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R385W SNV missense NA Probably damaging ATP1A1 chr1:116932964 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R266L SNV missense NA Probably damaging IGSF3 chr1:117156422 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P593fs Indel frameshift_variant NA - WDR3 chr1:118493485 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F858L SNV missense NA Probably damaging WDR3 chr1:118499809 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V80A SNV missense NA Probably damaging RBM8A chr1:145508508 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R156X SNV stop_gained NA - PEX11B chr1:145522605 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W92_L93delinsTer Indel stop_gained NA - CD160 chr1:145698885 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F44del Indel disruptive_inframe_deletion NA - GPR89B chr1:147410852 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - NBPF14 chr1:148004793 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G100W SNV missense NA Probably damaging APH1A chr1:150240176 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G467A SNV missense NA Probably damaging PRPF3 chr1:150315902 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P470L SNV missense NA Probably damaging PRPF3 chr1:150315911 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P190L SNV missense NA Probably damaging HORMAD1 chr1:150679264 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R32S SNV missense NA Probably damaging HORMAD1 chr1:150689696 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C408fs Indel frameshift_variant NA - FAM63A chr1:150970652 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C406X SNV stop_gained NA - FAM63A chr1:150970657 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I193F SNV missense NA Probably damaging FAM63A chr1:150974661 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F239Y SNV missense NA Probably damaging BNIPL chr1:151015907 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T263R SNV missense NA Probably damaging BNIPL chr1:151016140 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q277fs Indel frameshift_variant NA - C1orf56 chr1:151021151 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q220X SNV stop_gained NA - LYSMD1 chr1:151133384 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - TMOD4 chr1:151143537 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - TMOD4 chr1:151144017 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L140P SNV missense NA Probably damaging TMOD4 chr1:151144812 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A121fs Indel frameshift_variant NA Probably damaging TMOD4 chr1:151146011 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R17W SNV missense NA Probably damaging PSMD4 chr1:151234659 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V171E SNV missense NA Probably damaging PSMD4 chr1:151237943 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q289R SNV missense NA Probably damaging PSMD4 chr1:151238877 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R362P SNV missense NA Probably damaging SELENBP1 chr1:151338124 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q97X SNV stop_gained NA - SELENBP1 chr1:151341929 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C262Y SNV missense NA Probably damaging LINGO4 chr1:151774396 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G178R SNV missense NA Probably damaging LINGO4 chr1:151774649 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H152L SNV missense NA Probably damaging THEM4 chr1:151860851 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SPRR1B chr1:153004978 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E93X SNV stop_gained NA - S100A8 chr1:153362584 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R140X SNV stop_gained NA - CHTOP chr1:153615717 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E193G SNV missense NA Probably damaging CREB3L4 chr1:153945254 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RAB13 chr1:153954653 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TDRD10 chr1:154515299 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W476X SNV stop_gained NA - KCNN3 chr1:154744472 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G438R SNV missense NA Probably damaging KCNN3 chr1:154744587 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D380V SNV missense NA Probably damaging PYGO2 chr1:154931337 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D380Y SNV missense NA Probably damaging PYGO2 chr1:154931338 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T120fs Indel frameshift_variant NA Probably damaging PYGO2 chr1:154932117 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q81fs Indel frameshift_variant NA - EFNA1 chr1:155103964 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W163C SNV missense NA Probably damaging MTX1 chr1:155179084 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RUSC1-AS1 chr1:155287797 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N104S SNV missense NA Probably damaging SSR2 chr1:155984804 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging SSR2 chr1:155988060 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R574C SNV missense NA Probably damaging UBQLN4 chr1:156006855 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P20R SNV missense NA Probably damaging UBQLN4 chr1:156023434 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q124H SNV missense NA Probably damaging SLC25A44 chr1:156170010 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging SLC25A44 chr1:156170020 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging SLC25A44 chr1:156170021 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y193H SNV missense NA Probably damaging SLC25A44 chr1:156170215 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A382G SNV missense NA Probably damaging SMG5 chr1:156236442 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L125H SNV missense NA Probably damaging SMG5 chr1:156246956 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H102fs Indel frameshift_variant NA Probably damaging SMG5 chr1:156247025 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y74C SNV missense NA Probably damaging SMG5 chr1:156247792 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y368X SNV stop_gained NA - RHBG chr1:156351984 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L346P SNV missense NA Probably damaging ISG20L2 chr1:156693166 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R315Q SNV missense NA - RRNAD1 chr1:156704108 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E233fs Indel frameshift_variant NA - HDGF chr1:156713509 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E233fs Indel frameshift_variant NA - HDGF chr1:156713510 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y1145fs Indel frameshift_variant NA - INSRR chr1:156811548 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V929fs Indel frameshift_variant NA - INSRR chr1:156814025 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I13fs Indel frameshift_variant NA - OR6K2 chr1:158670406 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S62fs Indel frameshift_variant NA - DARC chr1:159175405 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E11fs Indel frameshift_variant NA - OR10J3 chr1:159284418 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E61X SNV stop_gained NA - VSIG8 chr1:159828571 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TAGLN2 chr1:159890118 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L394F SNV missense NA Probably damaging PIGM chr1:160000348 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A146T SNV missense NA Probably damaging PIGM chr1:160001094 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P567fs Indel frameshift_variant NA - IGSF8 chr1:160062096 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V343fs Indel frameshift_variant NA - IGSF8 chr1:160062999 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q112X SNV stop_gained NA - DCAF8 chr1:160249632 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PEX19 chr1:160252205 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H58D SNV missense NA Probably damaging NCSTN chr1:160314598 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I338F SNV missense NA Probably damaging NCSTN chr1:160322692 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N200Y SNV missense NA Probably damaging CD48 chr1:160651046 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E274fs Indel frameshift_variant NA - ITLN2 chr1:160917723 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R335X SNV stop_gained NA - DEDD chr1:161091981 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - UFC1 chr1:161126788 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G62R SNV missense NA Probably damaging UFC1 chr1:161126800 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F121V SNV missense NA Probably damaging UFC1 chr1:161127939 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R254X SNV stop_gained NA - USP21 chr1:161132159 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - USP21 chr1:161134926 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D256A SNV missense NA Possibly damaging NDUFS2 chr1:161179965 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SDHC chr1:161326631 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P76fs Indel frameshift_variant NA - C1orf192 chr1:161335436 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - FCGR2A chr1:161480622 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - HSPA6 chr1:161495154 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - C1orf110 chr1:162829434 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N135H SNV missense NA Probably damaging LRRC52 chr1:165513936 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y65C SNV missense NA Probably damaging UCK2 chr1:165859535 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R146Q SNV missense NA Probably damaging UCK2 chr1:165865507 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter435SextX? SNV stop_lost NA - MAEL chr1:166991091 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y122fs Indel frameshift_variant NA - CREG1 chr1:167517349 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R173X SNV stop_gained NA - RCSD1 chr1:167666378 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D142H SNV missense NA Probably damaging MPZL1 chr1:167741677 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A57P SNV missense NA Probably damaging XCL2 chr1:168511238 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y484X SNV stop_gained NA - MROH9 chr1:170965762 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - MYOC chr1:171605511 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A182T SNV missense NA Probably damaging PIGC chr1:172411219 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - C1orf105 chr1:172414299 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R95fs Indel frameshift_variant NA - C1orf105 chr1:172431327 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L149fs Indel frameshift_variant NA - TNFSF18 chr1:173010657 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RP4-798P15.3 chr1:177930079 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R17fs Indel frameshift_variant NA - TEX35 chr1:178482367 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q137fs Indel frameshift_variant NA - TEX35 chr1:178489876 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A433T SNV missense NA Probably damaging ANGPTL1 chr1:178820443 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - GLUL chr1:182353644 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E203D SNV missense NA Probably damaging GLUL chr1:182354686 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G200V SNV missense NA Probably damaging NMNAT2 chr1:183247740 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R66H SNV missense NA Probably damaging NMNAT2 chr1:183261970 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P50H SNV missense NA Probably damaging NMNAT2 chr1:183262865 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A214V SNV missense NA Probably damaging SMG7 chr1:183498111 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D369N SNV missense NA Probably damaging SMG7 chr1:183502909 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T444fs Indel frameshift_variant NA Probably damaging SMG7 chr1:183510150 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N684fs Indel frameshift_variant NA Probably damaging SMG7 chr1:183514265 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H132R SNV missense NA Probably damaging ARPC5 chr1:183599603 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G103fs Indel frameshift_variant NA - APOBEC4 chr1:183617609 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E625fs Indel frameshift_variant NA - COLGALT2 chr1:183907894 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y401C SNV missense NA - COLGALT2 chr1:183914633 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y115X SNV stop_gained NA - COLGALT2 chr1:183947573 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y113S SNV missense NA - COLGALT2 chr1:183947580 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S148fs Indel frameshift_variant NA - TSEN15 chr1:184041377 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L517S SNV missense NA Probably damaging PTGS2 chr1:186643750 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E150X SNV stop_gained NA - RGS18 chr1:192150586 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RGS13 chr1:192627330 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L141fs Indel frameshift_variant NA - RGS13 chr1:192628590 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y183fs Indel frameshift_variant NA - CFHR4 chr1:196876099 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S310fs Indel frameshift_variant NA - CFHR4 chr1:196879540 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - CRB1 chr1:197237610 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CRB1 chr1:197446792 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L85H SNV missense NA Probably damaging NEK7 chr1:198231760 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H56fs Indel frameshift_variant NA - NR5A2 chr1:200008888 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R160Q SNV missense NA Probably damaging NR5A2 chr1:200017315 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S130C SNV missense NA Probably damaging TNNI1 chr1:201380552 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R114H SNV missense NA Probably damaging TNNI1 chr1:201380600 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging TNNI1 chr1:201386248 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R320X SNV stop_gained NA - ADIPOR1 chr1:202911194 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P59L SNV missense NA Probably damaging BTG2 chr1:203276265 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R272W SNV missense NA Probably damaging RBBP5 chr1:205069131 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D311N SNV missense NA Probably damaging TMCC2 chr1:205238261 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P454fs Indel frameshift_variant NA Probably damaging TMCC2 chr1:205238690 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N180S SNV missense NA Probably damaging NUAK2 chr1:205277324 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P355A SNV missense NA - ELK4 chr1:205589111 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L155fs Indel frameshift_variant NA - ELK4 chr1:205589709 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - RAB7L1 chr1:205744084 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G154D SNV missense NA Probably damaging PM20D1 chr1:205814481 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y375C SNV missense NA Probably damaging DYRK3 chr1:206821667 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D416A SNV missense NA Probably damaging DYRK3 chr1:206821790 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L165R SNV missense NA Probably damaging IL20 chr1:207041872 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C107F SNV missense NA Probably damaging IL24 chr1:207074852 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C53X SNV stop_gained NA - FCAMR chr1:207140407 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A48V SNV missense NA Probably damaging PFKFB2 chr1:207235355 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging PFKFB2 chr1:207236767 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L304S SNV missense NA Probably damaging PFKFB2 chr1:207241578 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E547X SNV stop_gained NA - C4BPA chr1:207317907 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - CR1 chr1:207785388 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E326X SNV stop_gained NA - CD34 chr1:208061265 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q284R SNV missense NA Probably damaging CD34 chr1:208062148 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C25X SNV stop_gained NA - CD34 chr1:208073202 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L26fs Indel frameshift_variant NA - CD34 chr1:208084348 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I208F SNV missense NA Probably damaging CAMK1G chr1:209781265 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - HSD11B1 chr1:209880138 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S146I SNV missense NA Probably damaging HSD11B1 chr1:209880393 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L159_P160insGL Indel inframe_insertion NA - SLC30A1 chr1:211751477 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q662X SNV stop_gained NA - INTS7 chr1:212141881 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P279R SNV missense NA - MARC2 chr1:220953533 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E109A SNV missense NA - MARC1 chr1:220964883 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R332Q SNV missense NA Probably damaging HLX chr1:221057574 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C451X SNV stop_gained NA - HLX chr1:221057932 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F258fs Indel frameshift_variant NA - AIDA chr1:222843524 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P22del Indel inframe_deletion NA - FAM177B chr1:222919948 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - FAM177B chr1:222923261 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L181F SNV missense NA Probably damaging FBXO28 chr1:224340870 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G257V SNV missense NA Probably damaging DEGS1 chr1:224377966 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K264M SNV missense NA Probably damaging WNT3A chr1:228246898 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W369C SNV missense NA Probably damaging TAF5L chr1:229730707 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R248X SNV stop_gained NA - TAF5L chr1:229738172 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q422X SNV stop_gained NA - PGBD5 chr1:230468689 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A121V SNV missense NA Probably damaging C1orf198 chr1:230991436 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - FAM89A chr1:231155873 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R59delinsPG Indel disruptive_inframe_insertion NA - NTPCR chr1:233091443 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T143A SNV missense NA - NTPCR chr1:233105787 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G303V SNV missense NA Probably damaging SLC35F3 chr1:234452427 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P121H SNV missense NA - COA6 chr1:234510125 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q181X SNV stop_gained NA - B3GALNT2 chr1:235647652 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - EDARADD chr1:236557745 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W2X SNV stop_gained NA - ZP4 chr1:238053930 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C517S SNV missense NA Probably damaging CHRM3 chr1:240072301 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q46X SNV stop_gained NA - GREM2 chr1:240656640 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - KMO chr1:241712199 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L66F SNV missense NA Probably damaging KMO chr1:241713050 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W415X SNV stop_gained NA - KMO chr1:241753550 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q1017X SNV stop_gained NA - CEP170 chr1:243328213 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D521G SNV missense NA Probably damaging CEP170 chr1:243349085 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q60H SNV missense NA Probably damaging AKT3 chr1:243828178 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P470S SNV missense NA Probably damaging HNRNPU chr1:245021399 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E279dup Indel disruptive_inframe_insertion NA Probably damaging HNRNPU chr1:245025800 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K744del Indel inframe_deletion NA - AHCTF1 chr1:247053284 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S431fs Indel frameshift_variant NA - ZNF669 chr1:247263780 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L7fs Indel frameshift_variant NA - ZNF669 chr1:247267482 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F215fs Indel frameshift_variant NA - ZNF124 chr1:247320279 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ZNF124 chr1:247322307 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E299X SNV stop_gained NA - OR11L1 chr1:248004304 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P58S SNV missense NA Probably damaging OR2W3 chr1:248059060 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P79S SNV missense NA Probably damaging OR2W3 chr1:248059123 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L101V SNV missense NA Probably damaging OR2W3 chr1:248059189 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L113fs Indel frameshift_variant NA Probably damaging OR2W3 chr1:248059220 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R303fs Indel frameshift_variant NA Probably damaging OR2W3 chr1:248059795 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S20X SNV stop_gained NA - OR2L5 chr1:248185308 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y276fs Indel frameshift_variant NA - OR14C36 chr1:248512902 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T210fs Indel frameshift_variant NA - OR2T1 chr1:248569921 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C291fs Indel frameshift_variant NA - OR2T1 chr1:248570164 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L162fs Indel frameshift_variant NA - OR2T3 chr1:248637133 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y225C SNV missense NA Probably damaging SH3BP5L chr1:249107225 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y25fs Indel frameshift_variant NA - ZNF672 chr1:249141546 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K326X SNV stop_gained NA - ZNF692 chr1:249149656 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F219del Indel inframe_deletion NA - FAM110C chr2:45728 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S195fs Indel frameshift_variant NA - SNTG2 chr2:1168858 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A271fs Indel frameshift_variant NA - SNTG2 chr2:1241748 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G172fs Indel frameshift_variant NA - RPS7 chr2:3627852 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G306fs Indel frameshift_variant NA - SOX11 chr2:5833767 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E57G SNV missense NA Probably damaging RNF144A chr2:7154619 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C214Y SNV missense NA Probably damaging RNF144A chr2:7164631 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q140X SNV stop_gained NA - YWHAQ chr2:9731521 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - RRM2 chr2:10264892 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R248H SNV missense NA Probably damaging ATP6V1C2 chr2:10915115 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L366P SNV missense NA Probably damaging ATP6V1C2 chr2:10922404 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D95H SNV missense NA Probably damaging C2orf50 chr2:11280661 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PQLC3 chr2:11312050 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W150G SNV missense NA Probably damaging PQLC3 chr2:11312144 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C120X SNV stop_gained NA - FAM84A chr2:14774463 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R32X SNV stop_gained NA - FAM49A chr2:16747012 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y15C SNV missense NA Probably damaging LAPTM4A chr2:20251238 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y299H SNV missense NA Probably damaging SDC1 chr2:20402565 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E283K SNV missense NA Probably damaging SDC1 chr2:20402613 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N44fs Indel frameshift_variant NA - FKBP1B chr2:24283726 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H1418R SNV missense NA Probably damaging ASXL2 chr2:25964953 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A1406V SNV missense NA Probably damaging ASXL2 chr2:25964989 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R39W SNV missense NA - DRC1 chr2:26624972 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E270K SNV missense NA - DRC1 chr2:26654794 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R130G SNV missense NA Probably damaging CENPA chr2:27016112 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L310fs Indel frameshift_variant NA - DPYSL5 chr2:27157582 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M311fs Indel frameshift_variant NA - DPYSL5 chr2:27157586 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F93V SNV missense NA Probably damaging UCN chr2:27530487 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R104H SNV missense NA Probably damaging NRBP1 chr2:27656640 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - KRTCAP3 chr2:27665473 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter55QextX? SNV stop_lost NA - MRPL33 chr2:28002421 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - RBKS chr2:28113155 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P61L SNV missense NA Probably damaging BRE chr2:28152752 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W375fs Indel frameshift_variant NA Probably damaging BRE chr2:28550173 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K140T SNV missense NA Probably damaging PPP1CB chr2:29004607 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SPDYA chr2:29041973 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P113L SNV missense NA Probably damaging YIPF4 chr2:32517350 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q499X SNV stop_gained NA - FAM98A chr2:33809905 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N208K SNV missense NA Probably damaging FAM98A chr2:33811725 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G186del Indel disruptive_inframe_deletion NA - GPATCH11 chr2:37319346 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G124V SNV missense NA - NDUFAF7 chr2:37464973 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q264X SNV stop_gained NA - NDUFAF7 chr2:37471114 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q227fs Indel frameshift_variant NA - RMDN2 chr2:38179036 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q297fs Indel frameshift_variant NA - RMDN2 chr2:38179246 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M216K SNV missense NA - TMEM178A chr2:39934321 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P240S SNV missense NA - TMEM178A chr2:39944215 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G60V SNV missense NA Probably damaging HAAO chr2:43010988 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C23Y SNV missense NA Probably damaging HAAO chr2:43019609 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L135del Indel disruptive_inframe_deletion NA - ZFP36L2 chr2:43452538 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E19X SNV stop_gained NA - ZFP36L2 chr2:43452888 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R180W SNV missense NA Probably damaging SIX2 chr2:45235712 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K132M SNV missense NA Probably damaging SIX2 chr2:45235855 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L66F SNV missense NA Probably damaging SIX2 chr2:45236054 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G53W SNV missense NA Probably damaging RHOQ chr2:46770907 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G170V SNV missense NA Probably damaging RHOQ chr2:46808113 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L88R SNV missense NA Probably damaging MCFD2 chr2:47134995 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - C2orf61 chr2:47382309 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - EPCAM chr2:47602439 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K246I SNV missense NA Probably damaging EPCAM chr2:47606189 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R448W SNV missense NA Probably damaging FBXO11 chr2:48059544 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P191_G192insGP Indel disruptive_inframe_insertion NA - TSPYL6 chr2:54482716 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K118fs Indel frameshift_variant NA - C2orf73 chr2:54570973 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P246fs Indel frameshift_variant NA - CCDC85A chr2:56420069 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - FANCL chr2:58390069 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P184del Indel disruptive_inframe_deletion NA - FANCL chr2:58425715 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y330fs Indel frameshift_variant NA - PEX13 chr2:61275680 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E954G SNV missense NA Probably damaging XPO1 chr2:61709626 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y381H SNV missense NA Probably damaging XPO1 chr2:61721133 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G105R SNV missense NA Probably damaging MEIS1 chr2:66667048 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q124X SNV stop_gained NA - C1D chr2:68273128 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G86R SNV missense NA Probably damaging WDR92 chr2:68374627 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S248X SNV stop_gained NA - PNO1 chr2:68401918 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E101K SNV missense NA - RP11-474G23.1 chr2:68413734 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter138fs Indel frameshift_variant NA - CNRIP1 chr2:68544206 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H392Y SNV missense NA Probably damaging APLF chr2:68772332 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E166X SNV stop_gained NA - GKN1 chr2:69207183 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G132V SNV missense NA Probably damaging AAK1 chr2:69769794 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D2H SNV missense NA Probably damaging PCBP1 chr2:70314879 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - TIA1 chr2:70475561 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L286P SNV missense NA Probably damaging CYP26B1 chr2:72361894 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V28fs Indel frameshift_variant NA Probably damaging CYP26B1 chr2:72374886 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q197fs Indel frameshift_variant NA - DGUOK chr2:74177853 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R369H SNV missense NA Probably damaging DCTN1 chr2:74597614 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M2del Indel disruptive_inframe_deletion NA Probably damaging DCTN1 chr2:74601472 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q206H SNV missense NA Probably damaging TLX2 chr2:74742977 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P576S SNV missense NA Probably damaging DQX1 chr2:74746763 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T195A SNV missense NA Probably damaging HTRA2 chr2:74757820 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging HTRA2 chr2:74758830 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E133Q SNV missense NA - EVA1A chr2:75720424 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I232fs Indel frameshift_variant NA - TGOLN2 chr2:85554165 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K103fs Indel frameshift_variant NA - TGOLN2 chr2:85554546 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S98X SNV stop_gained NA - TGOLN2 chr2:85554562 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S55fs Indel frameshift_variant NA - GNLY chr2:85924635 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G201R SNV missense NA Probably damaging ST3GAL5 chr2:86075045 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H28R SNV missense NA - CHMP3 chr2:86847502 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L363P SNV missense NA Probably damaging RMND5A chr2:86998811 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S10Y SNV missense NA Probably damaging KRCC1 chr2:88328054 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C68Y SNV missense NA Probably damaging SMYD1 chr2:88383900 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging SMYD1 chr2:88384012 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W34X SNV stop_gained NA - RPIA chr2:88991317 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G115D SNV missense NA Probably damaging MRPS5 chr2:95775720 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T25fs Indel frameshift_variant NA - ANKRD39 chr2:97523652 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y139C SNV missense NA Probably damaging SEMA4C chr2:97531407 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V299A SNV missense NA Probably damaging FAHD2B chr2:97749541 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - ANKRD36B chr2:98169705 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D70fs Indel frameshift_variant NA - MITD1 chr2:99790422 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M69T SNV missense NA Probably damaging MITD1 chr2:99790425 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P539L SNV missense NA Probably damaging LONRF2 chr2:100910832 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging LONRF2 chr2:100919381 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T333N SNV missense NA Probably damaging CHST10 chr2:101009924 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V115D SNV missense NA Probably damaging PDCL3 chr2:101186159 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y115fs Indel frameshift_variant NA - IL1R2 chr2:102632341 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y204C SNV missense NA Probably damaging IL1R2 chr2:102636197 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y301X SNV stop_gained NA - IL1RL1 chr2:102959808 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S17fs Indel frameshift_variant NA - IL18R1 chr2:102979166 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - IL18R1 chr2:102979179 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T263I SNV missense NA Probably damaging GPR45 chr2:105859103 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - LIMS1 chr2:109297224 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q39fs Indel frameshift_variant NA - EDAR chr2:109546635 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q47X SNV stop_gained NA - FBLN7 chr2:112917316 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E227X SNV stop_gained NA - FBLN7 chr2:112940376 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C240fs Indel frameshift_variant NA - FBLN7 chr2:112940414 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C14G SNV missense NA Probably damaging IL1A chr2:113541308 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E40X SNV stop_gained NA - IL1F10 chr2:113832299 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C111R SNV missense NA Probably damaging INSIG2 chr2:118860859 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N379K SNV missense NA Probably damaging EN1 chr2:119600556 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - C2orf76 chr2:120097401 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A102fs Indel frameshift_variant NA - TMEM177 chr2:120438729 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P197R SNV missense NA Probably damaging TMEM177 chr2:120439019 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y242C SNV missense NA Probably damaging TMEM177 chr2:120439154 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - PTPN4 chr2:120725513 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W179S SNV missense NA Probably damaging INHBB chr2:121106762 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H119D SNV missense NA Probably damaging GLI2 chr2:121708919 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R720S SNV missense NA Probably damaging GLI2 chr2:121744055 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y265fs Indel frameshift_variant NA - TFCP2L1 chr2:121997200 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H170Y SNV missense NA Probably damaging TFCP2L1 chr2:122004543 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D127N SNV missense NA Probably damaging TFCP2L1 chr2:122006576 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K179N SNV missense NA - NIFK chr2:122488496 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W134fs Indel frameshift_variant NA - NIFK chr2:122488632 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R927H SNV missense NA Probably damaging SAP130 chr2:128707538 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L236fs Indel frameshift_variant NA - RAB6C chr2:130738392 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W511X SNV stop_gained NA - AMER3 chr2:131521177 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P516fs Indel frameshift_variant NA - AMER3 chr2:131521190 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S75fs Indel frameshift_variant NA - FAM168B chr2:131813200 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L63P SNV missense NA - MZT2A chr2:132249580 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S793del Indel inframe_deletion NA - ZEB2 chr2:145156374 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N434fs Indel frameshift_variant NA - STAM2 chr2:152980327 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y6C SNV missense NA Probably damaging GALNT13 chr2:154801027 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R141H SNV missense NA Probably damaging GALNT13 chr2:155098653 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter46CextX? SNV stop_lost NA Probably damaging GALNT13 chr2:155295231 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L91fs Indel frameshift_variant NA - CD302 chr2:160637417 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y65fs Indel frameshift_variant NA - PSMD14 chr2:162224365 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G56D SNV missense NA Probably damaging GCG chr2:163003950 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P849S SNV missense NA Probably damaging KCNH7 chr2:163253318 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D730N SNV missense NA Probably damaging KCNH7 chr2:163256918 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V662L SNV missense NA Probably damaging KCNH7 chr2:163280016 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G651S SNV missense NA Probably damaging KCNH7 chr2:163291711 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G586R SNV missense NA Probably damaging KCNH7 chr2:163291906 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S55C SNV missense NA Probably damaging KCNH7 chr2:163693190 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M351fs Indel frameshift_variant NA - FIGN chr2:164467290 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G278V SNV missense NA Probably damaging FIGN chr2:164467509 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E68G SNV missense NA - KLHL41 chr2:170366491 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y307X SNV stop_gained NA - SP5 chr2:171573638 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F326fs Indel frameshift_variant NA - SP5 chr2:171573694 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P98Q SNV missense NA Probably damaging GORASP2 chr2:171806161 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging GORASP2 chr2:171806801 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q266fs Indel frameshift_variant NA Probably damaging GORASP2 chr2:171813004 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L321R SNV missense NA Probably damaging TLK1 chr2:171906405 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K315del Indel disruptive_inframe_deletion NA - CIR1 chr2:175213631 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W112C SNV missense NA Probably damaging CHRNA1 chr2:175622377 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - KIAA1715 chr2:176829099 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D22G SNV missense NA Probably damaging KIAA1715 chr2:176857914 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A510V SNV missense NA Probably damaging NFE2L2 chr2:178095802 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I20T SNV missense NA Probably damaging NFE2L2 chr2:178098986 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R353H SNV missense NA Probably damaging AGPS chr2:178333205 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L276Q SNV missense NA Probably damaging PRKRA chr2:179296939 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TTN-AS1 chr2:179395788 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - UBE2E3 chr2:181922553 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H607dup Indel inframe_insertion NA - ZSWIM2 chr2:187692790 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C258Y SNV missense NA Probably damaging ZSWIM2 chr2:187698728 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F87fs Indel frameshift_variant NA Probably damaging ZSWIM2 chr2:187709468 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging ZSWIM2 chr2:187712445 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E89fs Indel frameshift_variant NA - MSTN chr2:190927051 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L191fs Indel frameshift_variant NA - HIBCH chr2:191116980 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T51K SNV missense NA - NABP1 chr2:192543776 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter426RextX? SNV stop_lost NA - SDPR chr2:192700651 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S241C SNV missense NA Probably damaging SDPR chr2:192701206 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S234C SNV missense NA Probably damaging SDPR chr2:192701226 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R289H SNV missense NA Probably damaging SF3B1 chr2:198274532 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R154L SNV missense NA Probably damaging C2orf69 chr2:200789912 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R73del Indel disruptive_inframe_deletion NA - CLK1 chr2:201726493 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F343C SNV missense NA - ORC2 chr2:201791513 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D13fs Indel frameshift_variant NA - ALS2CR12 chr2:202216090 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P175S SNV missense NA - TMEM237 chr2:202496804 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V438D SNV missense NA Probably damaging MPP4 chr2:202519628 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P320R SNV missense NA Probably damaging MPP4 chr2:202539965 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D274fs Indel frameshift_variant NA Probably damaging MPP4 chr2:202545668 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V203M SNV missense NA Probably damaging MPP4 chr2:202547607 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I182fs Indel frameshift_variant NA Probably damaging MPP4 chr2:202549812 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G141R SNV missense NA - CDK15 chr2:202677258 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L238F SNV missense NA - CDK15 chr2:202698676 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P342fs Indel frameshift_variant NA - CDK15 chr2:202737014 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N38D SNV missense NA Probably damaging WDR12 chr2:203772612 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L2428fs Indel frameshift_variant NA - NBEAL1 chr2:204066394 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E265del Indel inframe_deletion NA - RAPH1 chr2:204341816 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - RAPH1 chr2:204359955 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q216X SNV stop_gained NA - CTLA4 chr2:204737509 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ICOS chr2:204801597 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q60fs Indel frameshift_variant NA - ICOS chr2:204820471 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H70fs Indel frameshift_variant NA - ZDBF2 chr2:207169460 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R134X SNV stop_gained NA - ZDBF2 chr2:207169652 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E1089X SNV stop_gained NA - ZDBF2 chr2:207172517 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S1158X SNV stop_gained NA - ZDBF2 chr2:207172725 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q1375X SNV stop_gained NA - ZDBF2 chr2:207173375 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V1798dup Indel disruptive_inframe_insertion NA - ZDBF2 chr2:207174642 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y145X SNV stop_gained NA - CRYGB chr2:209007455 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G41A SNV missense NA Probably damaging CRYGA chr2:209028058 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G300V SNV missense NA Probably damaging IDH1 chr2:209104679 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V1105fs Indel frameshift_variant NA - MAP2 chr2:210560202 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K1104delinsMKE Indel disruptive_inframe_insertion NA - MAP2 chr2:210560204 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E122K SNV missense NA Probably damaging ACADL chr2:211082696 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R87M SNV missense NA Probably damaging ACADL chr2:211082800 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H420R SNV missense NA Probably damaging IKZF2 chr2:213872424 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N131K SNV missense NA Probably damaging IKZF2 chr2:213921588 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I33F SNV missense NA Possibly damaging IKZF2 chr2:214012492 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N107S SNV missense NA Probably damaging PECR chr2:216930139 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N723T SNV missense NA Probably damaging CCDC108 chr2:219892415 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SLC23A3 chr2:220026927 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W166X SNV stop_gained NA - SLC23A3 chr2:220033769 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E87X SNV stop_gained NA - DES chr2:220283443 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - KCNE4 chr2:223917550 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E133fs Indel frameshift_variant NA - KCNE4 chr2:223917786 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R154_Ter155insCTer Indel disruptive_inframe_insertion NA - AP1S3 chr2:224629894 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I31N SNV missense NA Possibly damaging AP1S3 chr2:224642498 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R15G SNV missense NA Probably damaging AP1S3 chr2:224642547 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y264N SNV missense NA Probably damaging RHBDD1 chr2:227779001 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - COL4A4 chr2:227895158 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - COL4A4 chr2:227896660 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - COL4A4 chr2:227896773 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - MFF chr2:228205045 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SP110 chr2:231050709 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K276_G277delinsR Indel splice_donor_variant NA - SP110 chr2:231074644 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S163L SNV missense NA Probably damaging CAB39 chr2:231663533 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging CAB39 chr2:231674993 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M246V SNV missense NA Probably damaging CAB39 chr2:231682511 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging CAB39 chr2:231682577 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S76fs Indel frameshift_variant NA - ITM2C chr2:231738235 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R90X SNV stop_gained NA - ITM2C chr2:231740341 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T381I SNV missense NA Probably damaging HTR2B chr2:231973535 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R691X SNV stop_gained NA - NCL chr2:232319964 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y346S SNV missense NA Probably damaging NMUR1 chr2:232389998 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T138M SNV missense NA Probably damaging NMUR1 chr2:232393319 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A80dup Indel inframe_insertion NA - COPS7B chr2:232658971 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P185S SNV missense NA Probably damaging SAG chr2:234237164 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y254C SNV missense NA Probably damaging SAG chr2:234240313 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A311T SNV missense NA Probably damaging SAG chr2:234243732 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K1156fs Indel frameshift_variant NA - USP40 chr2:234394251 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W460X SNV stop_gained NA - USP40 chr2:234442249 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L157S SNV missense NA Probably damaging USP40 chr2:234465613 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging USP40 chr2:234468455 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D240fs Indel frameshift_variant NA - UGT1A6 chr2:234602362 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - UGT1A1 chr2:234669799 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K350X SNV stop_gained NA - HJURP chr2:234750378 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R277C SNV missense NA Probably damaging GBX2 chr2:237074775 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E276G SNV missense NA Probably damaging GBX2 chr2:237074777 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W139C SNV missense NA Probably damaging RAMP1 chr2:238820395 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G146C SNV missense NA Probably damaging RAMP1 chr2:238820414 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G107S SNV missense NA Probably damaging SCLY chr2:238976798 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q126X SNV stop_gained NA - SCLY chr2:238977986 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D308V SNV missense NA Probably damaging ILKAP chr2:239082208 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R155X SNV stop_gained NA - TRAF3IP1 chr2:239237435 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E258fs Indel frameshift_variant NA - TRAF3IP1 chr2:239237836 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K259fs Indel frameshift_variant NA - TRAF3IP1 chr2:239237838 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P469A SNV missense NA Probably damaging TRAF3IP1 chr2:239258003 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging TRAF3IP1 chr2:239307393 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S716L SNV missense NA Probably damaging HDAC4 chr2:240024543 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T653M SNV missense NA Probably damaging HDAC4 chr2:240033227 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P522fs Indel frameshift_variant NA Probably damaging HDAC4 chr2:240036959 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R132W SNV missense NA Probably damaging HDAC4 chr2:240098205 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L276F SNV missense NA Probably damaging NDUFA10 chr2:240951047 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P241L SNV missense NA Probably damaging NDUFA10 chr2:240954223 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - KIF1A chr2:241705133 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T221M SNV missense NA Probably damaging ING5 chr2:242662668 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H164fs Indel frameshift_variant NA - AC026202.1 chr3:5229492 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W481X SNV stop_gained NA - ARPC4-TTLL3 chr3:9870785 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C38fs Indel frameshift_variant NA - FANCD2OS chr3:10146346 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T23fs Indel frameshift_variant NA - FANCD2OS chr3:10146390 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V7fs Indel frameshift_variant NA - GHRL chr3:10331845 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A334T SNV missense NA Probably damaging SLC6A1 chr3:11067967 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E306K SNV missense NA Probably damaging MKRN2 chr3:12618188 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W379L SNV missense NA Probably damaging MKRN2 chr3:12623637 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter417SextX? SNV stop_lost NA Probably damaging MKRN2 chr3:12623751 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel frameshift_variant NA - IQSEC1 chr3:12940888 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q62X SNV stop_gained NA - IQSEC1 chr3:12983205 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - HDAC11 chr3:13544481 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I359fs Indel frameshift_variant NA - SLC6A6 chr3:14509693 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - GRIP2 chr3:14555172 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - GRIP2 chr3:14581775 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - FGD5-AS1 chr3:14963913 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L740del Indel disruptive_inframe_deletion NA - ZFYVE20 chr3:15115424 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q499X SNV stop_gained NA - ZFYVE20 chr3:15116149 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L485P SNV missense NA Probably damaging ZFYVE20 chr3:15116190 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S222fs Indel frameshift_variant NA Probably damaging ZFYVE20 chr3:15124049 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N401dup Indel inframe_insertion NA - SH3BP5 chr3:15297757 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter58WextX? SNV stop_lost NA - SH3BP5 chr3:15300355 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R381W SNV missense NA Probably damaging TGFBR2 chr3:30713741 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S13L SNV missense NA Probably damaging GPD1L chr3:32148241 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging GPD1L chr3:32188227 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y135X SNV stop_gained NA - CMTM7 chr3:32491017 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q646X SNV stop_gained NA - DCLK3 chr3:36756830 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R110fs Indel frameshift_variant NA - DCLK3 chr3:36779823 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I111T SNV missense NA Probably damaging CTDSPL chr3:38006126 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - ACVR2B chr3:38519864 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C319Y SNV missense NA Probably damaging CX3CR1 chr3:39307141 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A106G SNV missense NA Probably damaging CX3CR1 chr3:39307780 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - EIF1B chr3:40353063 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W47X SNV stop_gained NA - ZNF662 chr3:42949564 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E126del Indel disruptive_inframe_deletion NA - ABHD5 chr3:43743944 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N306K SNV missense NA Probably damaging SACM1L chr3:45765032 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y481C SNV missense NA Probably damaging SACM1L chr3:45780129 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W168C SNV missense NA Probably damaging CCRL2 chr3:46450038 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P122L SNV missense NA Probably damaging CCDC12 chr3:46964834 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I112F SNV missense NA Possibly damaging CCDC12 chr3:46965108 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CSPG5 chr3:47604253 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L97fs Indel frameshift_variant NA - ZNF589 chr3:48309468 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S141fs Indel frameshift_variant NA - NME6 chr3:48336288 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N306fs Indel frameshift_variant NA - ATRIP chr3:48500841 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A223fs Indel frameshift_variant NA - SHISA5 chr3:48510562 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E379Q SNV missense NA Probably damaging PFKFB4 chr3:48561221 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D352N SNV missense NA Probably damaging PFKFB4 chr3:48563036 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M304T SNV missense NA Possibly damaging PFKFB4 chr3:48573021 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q169X SNV stop_gained NA - NCKIPSD chr3:48719571 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q240X SNV stop_gained NA - IP6K2 chr3:48727033 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W100fs Indel frameshift_variant NA - ARIH2 chr3:48999085 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R756W SNV missense NA Probably damaging QRICH1 chr3:49067950 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R511X SNV stop_gained NA - QRICH1 chr3:49083998 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S228X SNV stop_gained NA - QRICH1 chr3:49094950 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q210del Indel inframe_deletion NA - QRICH1 chr3:49095002 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E205X SNV stop_gained NA - CCDC36 chr3:49292903 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L196del Indel inframe_deletion NA - GPX1 chr3:49394844 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R265C SNV missense NA Probably damaging AMT chr3:49456488 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C660Y SNV missense NA Probably damaging MST1 chr3:49721784 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K481X SNV stop_gained NA - MST1 chr3:49722798 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K115X SNV stop_gained NA - MST1 chr3:49724689 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P56S SNV missense NA Probably damaging AMIGO3 chr3:49756733 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q441X SNV stop_gained NA - IP6K1 chr3:49764560 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R282fs Indel frameshift_variant NA - IP6K1 chr3:49765036 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R202X SNV stop_gained NA - IP6K1 chr3:49770236 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R41H SNV missense NA Possibly damaging IP6K1 chr3:49785352 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S28fs Indel frameshift_variant NA - CDHR4 chr3:49836835 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D95H SNV missense NA - FAM212A chr3:49841839 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L237_A238insV Indel disruptive_inframe_insertion NA - FAM212A chr3:49842265 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - SEMA3B chr3:50313275 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - LSMEM2 chr3:50324103 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E330del Indel inframe_deletion NA - HYAL3 chr3:50330940 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D321fs Indel frameshift_variant NA - HYAL3 chr3:50331085 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q77X SNV stop_gained NA - HYAL3 chr3:50332805 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M360fs Indel frameshift_variant NA - NPRL2 chr3:50385103 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G231C SNV missense NA - NPRL2 chr3:50385987 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter58YextX? SNV stop_lost NA - NPRL2 chr3:50386922 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K112del Indel inframe_deletion NA - MANF chr3:51425272 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R280H SNV missense NA Probably damaging PCBP4 chr3:51992953 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging PCBP4 chr3:51993117 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P145fs Indel frameshift_variant NA Probably damaging PCBP4 chr3:51994054 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T387I SNV missense NA - POC1A chr3:52109967 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - POC1A chr3:52172319 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - TWF2 chr3:52269072 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C1244F SNV missense NA Probably damaging PBRM1 chr3:52598210 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C1233S SNV missense NA Probably damaging PBRM1 chr3:52598243 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R78Q SNV missense NA Probably damaging PBRM1 chr3:52712519 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L131fs Indel frameshift_variant NA - SPCS1 chr3:52741707 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C508S SNV missense NA Probably damaging RFT1 chr3:53126022 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - RP11-894J14.5 chr3:53126383 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M147fs Indel frameshift_variant NA Probably damaging RFT1 chr3:53156405 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G47S SNV missense NA Probably damaging CHDH chr3:53857897 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q8X SNV stop_gained NA - SELK chr3:53922508 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A161T SNV missense NA Probably damaging HESX1 chr3:57232302 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T113I SNV missense NA Probably damaging HESX1 chr3:57232800 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E81fs Indel frameshift_variant NA Probably damaging HESX1 chr3:57232897 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - ASB14 chr3:57310757 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W189X SNV stop_gained NA - DNAH12 chr3:57494244 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G73W SNV missense NA Probably damaging FAM3D chr3:58631282 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P71S SNV missense NA Probably damaging FEZF2 chr3:62358333 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L146S SNV missense NA Probably damaging THOC7 chr3:63821040 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F34C SNV missense NA Probably damaging THOC7 chr3:63825368 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T238I SNV missense NA Probably damaging SUCLG2 chr3:67559275 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G94S SNV missense NA Probably damaging SUCLG2 chr3:67579557 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - MITF chr3:69988334 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R438L SNV missense NA Probably damaging FOXP1 chr3:71027020 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R363C SNV missense NA Probably damaging FOXP1 chr3:71037210 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q58_Q59del Indel disruptive_inframe_deletion NA Probably damaging FOXP1 chr3:71247356 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C115Y SNV missense NA Probably damaging PROK2 chr3:71821921 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S223X SNV stop_gained NA - EBLN2 chr3:73111900 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G309X SNV stop_gained NA - VGLL3 chr3:87017752 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T291I SNV missense NA Probably damaging VGLL3 chr3:87017805 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L299fs Indel frameshift_variant NA - HTR1F chr3:88040793 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G336R SNV missense NA Probably damaging HTR1F chr3:88040905 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H47del Indel inframe_deletion NA - ZNF654 chr3:88188596 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R526fs Indel frameshift_variant NA - ZNF654 chr3:88190035 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F92C SNV missense NA Probably damaging PROS1 chr3:93629534 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E57V SNV missense NA Probably damaging PROS1 chr3:93646158 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F92S SNV missense NA Probably damaging ARL6 chr3:97503819 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging ARL6 chr3:97506833 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C239W SNV missense NA Probably damaging OR5K3 chr3:98110226 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K270X SNV stop_gained NA - CMSS1 chr3:99897200 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R249X SNV stop_gained NA - SENP7 chr3:101090903 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G19X SNV stop_gained NA - SENP7 chr3:101219949 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K792N SNV missense NA Probably damaging ZBTB11 chr3:101371716 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M785T SNV missense NA Probably damaging ZBTB11 chr3:101371738 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R764X SNV stop_gained NA - ZBTB11 chr3:101373567 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C571Y SNV missense NA Probably damaging ZBTB11 chr3:101383470 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - HHLA2 chr3:108070633 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q235X SNV stop_gained NA - HHLA2 chr3:108076708 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter299WextX? SNV stop_lost NA - DPPA2 chr3:109019241 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C224Y SNV missense NA Probably damaging DPPA2 chr3:109023505 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G253D SNV missense NA Probably damaging DPPA4 chr3:109047857 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y68C SNV missense NA Probably damaging ABHD10 chr3:111700691 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q1517X SNV stop_gained NA - KIAA2018 chr3:113375980 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - NAA50 chr3:113442320 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T133I SNV missense NA Probably damaging GRAMD1C chr3:113595046 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N301D SNV missense NA Probably damaging GRAMD1C chr3:113627916 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K392fs Indel frameshift_variant NA - DRD3 chr3:113847589 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I124T SNV missense NA Probably damaging DRD3 chr3:113878614 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A15fs Indel frameshift_variant NA - TIMMDC1 chr3:119217623 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - CD80 chr3:119276575 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R341X SNV stop_gained NA - GSK3B chr3:119582380 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S95I SNV missense NA Probably damaging GPR156 chr3:119912221 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S95R SNV missense NA Probably damaging GPR156 chr3:119912222 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C42G SNV missense NA Probably damaging FBXO40 chr3:121340400 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S315R SNV missense NA Probably damaging ILDR1 chr3:121712651 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H167fs Indel frameshift_variant NA Probably damaging ILDR1 chr3:121720591 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L163V SNV missense NA Probably damaging ILDR1 chr3:121720604 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C45S SNV missense NA Probably damaging ILDR1 chr3:121725933 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F38Y SNV missense NA Probably damaging ILDR1 chr3:121725954 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D205H SNV missense NA Probably damaging KPNA1 chr3:122170863 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PARP15 chr3:122334705 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - HSPBAP1 chr3:122487730 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T229A SNV missense NA Probably damaging PDIA5 chr3:122842988 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L14dup Indel inframe_insertion NA - ROPN1 chr3:123699285 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S672dup Indel disruptive_inframe_insertion NA - HEG1 chr3:124732407 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T493fs Indel frameshift_variant NA - ZXDC chr3:126181027 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W215X SNV stop_gained NA - TPRA1 chr3:127294313 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P53S SNV missense NA Probably damaging TPRA1 chr3:127298684 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N332fs Indel frameshift_variant NA - KIAA1257 chr3:128694645 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - KIAA1257 chr3:128707569 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E506X SNV stop_gained NA - EFCC1 chr3:128755886 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P246L SNV missense NA - ISY1-RAB43 chr3:128849406 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K200_I201del Indel inframe_deletion NA - EFCAB12 chr3:129137174 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S143fs Indel frameshift_variant NA - COL6A5 chr3:130095437 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A463S SNV missense NA Probably damaging ATP2C1 chr3:130686240 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A516V SNV missense NA Probably damaging ATP2C1 chr3:130694207 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - NUDT16 chr3:131101160 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S156fs Indel frameshift_variant NA - NUDT16 chr3:131101214 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S317fs Indel frameshift_variant NA - TMEM108 chr3:133099502 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P77fs Indel frameshift_variant NA - C3orf36 chr3:133647417 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q460X SNV stop_gained NA - KY chr3:134323029 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K434fs Indel frameshift_variant NA - KY chr3:134323105 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G248A SNV missense NA Probably damaging KY chr3:134329193 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R362X SNV stop_gained NA - MSL2 chr3:135870639 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - ARMC8 chr3:137940772 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R159fs Indel frameshift_variant NA - ARMC8 chr3:137947798 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R78W SNV missense NA Probably damaging MRAS chr3:138116204 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H104del Indel inframe_deletion NA - TRIM42 chr3:140397379 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C345Y SNV missense NA Probably damaging ZBTB38 chr3:141162261 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q70fs Indel frameshift_variant NA - RNF7 chr3:141462383 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K91E SNV missense NA Probably damaging PFN2 chr3:149686199 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - EIF2A chr3:150276250 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K298T SNV missense NA Possibly damaging EIF2A chr3:150289826 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V343fs Indel frameshift_variant NA Possibly damaging EIF2A chr3:150289957 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q98fs Indel frameshift_variant NA - P2RY12 chr3:151056339 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D257V SNV missense NA Probably damaging AADAC chr3:151545530 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R355Q SNV missense NA Probably damaging AADAC chr3:151545824 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q90H SNV missense NA Probably damaging MBNL1 chr3:152132825 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I361fs Indel frameshift_variant NA - P2RY1 chr3:152554652 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E685del Indel inframe_deletion NA - DHX36 chr3:154002752 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R357X SNV stop_gained NA - DHX36 chr3:154022661 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G230fs Indel frameshift_variant NA - DHX36 chr3:154027565 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S40F SNV missense NA Probably damaging SSR3 chr3:156272760 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N105fs Indel frameshift_variant NA - TIPARP chr3:156395794 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K578del Indel inframe_deletion NA - TIPARP chr3:156422674 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M202fs Indel frameshift_variant NA - PTX3 chr3:157160224 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L277_D278insQL Indel inframe_insertion NA - SHOX2 chr3:157816052 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E45X SNV stop_gained NA - SHOX2 chr3:157823681 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R239W SNV missense NA Probably damaging IL12A chr3:159713299 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D22H SNV missense NA Probably damaging ARL14 chr3:160395198 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q154R SNV missense NA Probably damaging ARL14 chr3:160395595 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L272fs Indel frameshift_variant NA - PPM1L chr3:160786675 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S70R SNV missense NA Probably damaging SLITRK3 chr3:164908411 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G155A SNV missense NA - ACTRT3 chr3:169485875 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K155fs Indel frameshift_variant NA - MYNN chr3:169496746 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D364V SNV missense NA Probably damaging MYNN chr3:169498408 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T466fs Indel frameshift_variant NA Probably damaging MYNN chr3:169500428 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C501X SNV stop_gained NA - MYNN chr3:169502429 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K380N SNV missense NA Probably damaging SAMD7 chr3:169654225 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y225D SNV missense NA Probably damaging SEC62 chr3:169706090 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R139H SNV missense NA Probably damaging NCEH1 chr3:172365723 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V126G SNV missense NA Probably damaging NCEH1 chr3:172365762 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y516H SNV missense NA Probably damaging ECT2 chr3:172501610 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R639Q SNV missense NA Probably damaging ECT2 chr3:172520673 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - TBL1XR1 chr3:176750908 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H300Y SNV missense NA Probably damaging B3GNT5 chr3:182988484 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - HTR3D chr3:183754334 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F46del Indel inframe_deletion NA - DVL3 chr3:183873552 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G495S SNV missense NA Probably damaging DVL3 chr3:183885838 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P523L SNV missense NA Possibly damaging DVL3 chr3:183887863 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P671fs Indel frameshift_variant NA Possibly damaging DVL3 chr3:183888399 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G158X SNV stop_gained NA - THPO chr3:184090891 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R87X SNV stop_gained NA - IGF2BP2 chr3:185416116 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G289V SNV missense NA Probably damaging TBCCD1 chr3:186272867 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q186fs Indel frameshift_variant NA - FETUB chr3:186362667 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E163X SNV stop_gained NA - HRG chr3:186389507 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I156del Indel inframe_deletion NA - EIF4A2 chr3:186503784 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W212X SNV stop_gained NA - ADIPOQ chr3:186572393 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C607S SNV missense NA Probably damaging BCL6 chr3:187443307 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R28X SNV stop_gained NA - BCL6 chr3:187451400 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y125N SNV missense NA Probably damaging TPRG1 chr3:188956592 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T250I SNV missense NA Probably damaging TPRG1 chr3:189038530 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - HRASLS chr3:192973439 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S489fs Indel frameshift_variant NA - LRRC15 chr3:194080324 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q230X SNV stop_gained NA - LRRC15 chr3:194081103 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G76D SNV missense NA Probably damaging FAM43A chr3:194407782 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T235fs Indel frameshift_variant NA - SLC51A chr3:195956854 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R328_S329insSP Indel disruptive_inframe_insertion NA - PCYT1A chr3:195965679 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_acceptor_variant NA - PCYT1A chr3:195966607 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L158fs Indel frameshift_variant NA - PCYT1A chr3:195974251 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T152M SNV missense NA Probably damaging PCYT1A chr3:195974269 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T125M SNV missense NA Probably damaging PCYT1A chr3:195974350 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D2fs Indel frameshift_variant NA Probably damaging PCYT1A chr3:195997390 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R372fs Indel frameshift_variant NA - UBXN7 chr3:196089278 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R245H SNV missense NA Probably damaging FBXO45 chr3:196311062 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L186P SNV missense NA - NRROS chr3:196387071 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P552S SNV missense NA - NRROS chr3:196388168 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R17G SNV missense NA Probably damaging PAK2 chr3:196509566 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging PAK2 chr3:196539723 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V335del Indel disruptive_inframe_deletion NA Probably damaging PAK2 chr3:196541385 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K307fs Indel frameshift_variant NA - PIGG chr4:509780 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CPLX1 chr4:786237 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E27K SNV missense NA Probably damaging MAEA chr4:1305776 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G232R SNV missense NA Probably damaging WHSC1 chr4:1906039 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K531del Indel inframe_deletion NA - NELFA chr4:1985072 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E518fs Indel frameshift_variant NA - NELFA chr4:1985113 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E466K SNV missense NA - NELFA chr4:1985362 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T458M SNV missense NA - NELFA chr4:1985385 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G64R SNV missense NA Probably damaging DOK7 chr4:3475222 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R451fs Indel frameshift_variant NA Probably damaging DOK7 chr4:3495062 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R452fs Indel frameshift_variant NA Probably damaging DOK7 chr4:3495066 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - C4orf6 chr4:5527942 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I121F SNV missense NA - BLOC1S4 chr4:6718297 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A159T SNV missense NA - BLOC1S4 chr4:6718411 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P165R SNV missense NA Probably damaging GRPEL1 chr4:7062749 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ABLIM2 chr4:8009785 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R478X SNV stop_gained NA - ABLIM2 chr4:8010821 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q473X SNV stop_gained NA - ABLIM2 chr4:8021351 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A314T SNV missense NA Probably damaging ABLIM2 chr4:8037983 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging ABLIM2 chr4:8090012 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - HTRA3 chr4:8284163 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W352X SNV stop_gained NA - HTRA3 chr4:8304194 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C30X SNV stop_gained NA - GPR78 chr4:8582799 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CLNK chr4:10509661 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F297S SNV missense NA Probably damaging HS3ST1 chr4:11400740 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E118X SNV stop_gained NA - HS3ST1 chr4:11401278 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C840Y SNV missense NA Probably damaging CPEB2 chr4:15060102 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L401P SNV missense NA Probably damaging FBXL5 chr4:15627523 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E196fs Indel frameshift_variant NA - FGFBP1 chr4:15937670 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W70R SNV missense NA Probably damaging FGFBP1 chr4:15938048 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y70X SNV stop_gained NA - FGFBP2 chr4:15964543 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - GBA3 chr4:22694639 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P143L SNV missense NA Probably damaging ANAPC4 chr4:25390181 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K332N SNV missense NA Probably damaging ANAPC4 chr4:25396462 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter383GextX? SNV stop_lost NA - RBPJ chr4:26432419 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S1132X SNV stop_gained NA - PCDH7 chr4:31144098 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P556T SNV missense NA Probably damaging TLR10 chr4:38775546 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L225fs Indel frameshift_variant NA - TLR6 chr4:38830422 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V8M SNV missense NA Probably damaging RHOH chr4:40245028 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T28fs Indel frameshift_variant NA Probably damaging RHOH chr4:40245087 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S183X SNV stop_gained NA - NSUN7 chr4:40776341 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L398F SNV missense NA Probably damaging NSUN7 chr4:40796403 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - UCHL1 chr4:41258995 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - UCHL1 chr4:41259000 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y173C SNV missense NA Probably damaging UCHL1 chr4:41265300 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R461del Indel disruptive_inframe_deletion NA - KCTD8 chr4:44176844 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F229I SNV missense NA Probably damaging KCTD8 chr4:44449856 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L381fs Indel frameshift_variant NA - GUF1 chr4:44691363 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R416Q SNV missense NA Probably damaging GUF1 chr4:44691904 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E336K SNV missense NA Probably damaging GABRA4 chr4:46967115 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R137X SNV stop_gained NA - COMMD8 chr4:47455198 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SLAIN2 chr4:48372016 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q317K SNV missense NA Probably damaging SLAIN2 chr4:48384671 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R165W SNV missense NA Probably damaging NMU chr4:56465345 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L161fs Indel frameshift_variant NA Probably damaging NMU chr4:56466695 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q407X SNV stop_gained NA - TMPRSS11A chr4:68777107 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K255X SNV stop_gained NA - TMPRSS11A chr4:68784889 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F92S SNV missense NA Probably damaging TMPRSS11A chr4:68797765 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F332V SNV missense NA Probably damaging TMPRSS11F chr4:68930424 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K528del Indel disruptive_inframe_deletion NA - UGT2B15 chr4:69512831 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W118fs Indel frameshift_variant NA - UGT2B15 chr4:69535984 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K212X SNV stop_gained NA - UGT2B11 chr4:70079807 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W117X SNV stop_gained NA - UGT2B28 chr4:70146569 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W256X SNV stop_gained NA - UGT2B28 chr4:70148278 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L27fs Indel frameshift_variant NA - STATH chr4:70865504 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - HTN3 chr4:70896509 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - IGJ chr4:71527933 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D140G SNV missense NA Probably damaging UTP3 chr4:71554813 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R447I SNV missense NA Probably damaging UTP3 chr4:71555734 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C148F SNV missense NA Probably damaging AFP chr4:74306491 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F531L SNV missense NA Probably damaging AFP chr4:74318282 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S349X SNV stop_gained NA - SOWAHB chr4:77817957 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L174R SNV missense NA Probably damaging SEPT11 chr4:77933040 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H277R SNV missense NA Probably damaging SEPT11 chr4:77941670 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L226R SNV missense NA Possibly damaging CCNI chr4:77976316 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W27R SNV missense NA Probably damaging CCNI chr4:77987437 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L12F SNV missense NA Probably damaging CCNI chr4:77987480 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q178X SNV stop_gained NA - NAA11 chr4:80246500 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SLC10A6 chr4:87754458 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N72fs Indel frameshift_variant NA - MEPE chr4:88766135 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P285fs Indel frameshift_variant NA - MEPE chr4:88766779 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P148fs Indel frameshift_variant NA - SPP1 chr4:88902851 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D68Y SNV missense NA Probably damaging PPM1K chr4:89199534 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W67X SNV stop_gained NA - PPM1K chr4:89199535 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ADH1B chr4:100237053 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - ADH1C chr4:100261869 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K211N SNV missense NA Probably damaging C4orf17 chr4:100460324 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K15N SNV missense NA Probably damaging INTS12 chr4:106621118 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - AIMP1 chr4:107268685 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R186C SNV missense NA Probably damaging CYP2U1 chr4:108866191 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R488W SNV missense NA Probably damaging CYP2U1 chr4:108871406 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F128V SNV missense NA Probably damaging PLA2G12A chr4:110638773 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P73T SNV missense NA Probably damaging PLA2G12A chr4:110639907 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G48A SNV missense NA Probably damaging GAR1 chr4:110737463 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y326H SNV missense NA Probably damaging LRIT3 chr4:110790881 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D649fs Indel frameshift_variant NA Probably damaging LRIT3 chr4:110791845 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F111fs Indel frameshift_variant NA - ELOVL6 chr4:110980799 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R80Q SNV missense NA Probably damaging ELOVL6 chr4:110980893 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K56fs Indel frameshift_variant NA Probably damaging ELOVL6 chr4:111026706 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K80T SNV missense NA Probably damaging C4orf32 chr4:113107934 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SLC25A31 chr4:128690033 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N255S SNV missense NA Probably damaging ELF2 chr4:139983061 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging ELF2 chr4:140058783 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L282S SNV missense NA Probably damaging ELMOD2 chr4:141471492 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P2S SNV missense NA Probably damaging ZNF330 chr4:142143529 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S185L SNV missense NA Probably damaging ZNF330 chr4:142152623 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter63WextX? SNV stop_lost NA - GYPB chr4:144918698 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L68fs Indel frameshift_variant NA - GYPB chr4:144918759 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter203CextX? SNV stop_lost NA - C4orf51 chr4:146653712 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L265fs Indel frameshift_variant NA - ZNF827 chr4:146823616 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y984X SNV stop_gained NA - NR3C2 chr4:149002510 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P705fs Indel frameshift_variant NA - NR3C2 chr4:149075965 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P702_P703insTADMQVGTP Indel inframe_insertion NA - NR3C2 chr4:149075972 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V427fs Indel frameshift_variant NA - SH3D19 chr4:152065400 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W153X SNV stop_gained NA - PRSS48 chr4:152203542 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y252X SNV stop_gained NA - TIGD4 chr4:153691401 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K26N SNV missense NA Probably damaging TIGD4 chr4:153692079 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L196P SNV missense NA Probably damaging ARFIP1 chr4:153802290 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q221E SNV missense NA Probably damaging ARFIP1 chr4:153803902 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L245S SNV missense NA Probably damaging ARFIP1 chr4:153803975 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A103T SNV missense NA Probably damaging TRIM2 chr4:154197136 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging TRIM2 chr4:154197284 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V519fs Indel frameshift_variant NA Probably damaging TRIM2 chr4:154236676 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T666P SNV missense NA Probably damaging TRIM2 chr4:154245274 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging TRIM2 chr4:154249681 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H66Q SNV missense NA Probably damaging SFRP2 chr4:154709790 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I420T SNV missense NA Probably damaging FGG chr4:155526113 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - TDO2 chr4:156831336 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q253X SNV stop_gained NA - TDO2 chr4:156835505 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PDGFC chr4:157732104 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q133X SNV stop_gained NA - FAM218A chr4:165878571 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G232R SNV missense NA Probably damaging ANXA10 chr4:169100433 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L390fs Indel frameshift_variant NA - CLCN3 chr4:170618489 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A535V SNV missense NA Probably damaging CLCN3 chr4:170625189 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E850fs Indel frameshift_variant NA Probably damaging CLCN3 chr4:170641159 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q333fs Indel frameshift_variant NA - MFAP3L chr4:170912761 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C106Y SNV missense NA Probably damaging HMGB2 chr4:174254126 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A101T SNV missense NA Probably damaging HMGB2 chr4:174254142 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A29_A30del Indel inframe_deletion NA - SAP30 chr4:174292411 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I19fs Indel frameshift_variant NA - GPM6A chr4:176622901 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V55fs Indel frameshift_variant NA - CLDN24 chr4:184243415 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D169G SNV missense NA Probably damaging CASP3 chr4:185552289 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K156R SNV missense NA Probably damaging CASP3 chr4:185552935 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V81A SNV missense NA Probably damaging HELT chr4:185940623 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G32E SNV missense NA Probably damaging TRIML1 chr4:189060807 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C56F SNV missense NA Probably damaging TRIML1 chr4:189060879 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E439X SNV stop_gained NA - TRIML1 chr4:189068434 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y218X SNV stop_gained NA - CCDC127 chr5:205541 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R192H SNV missense NA Probably damaging TPPP chr5:665302 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D238fs Indel frameshift_variant NA - TRIP13 chr5:908140 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V248fs Indel frameshift_variant NA - IRX4 chr5:1878901 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P210dup Indel inframe_insertion NA - IRX4 chr5:1879722 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R145L SNV missense NA Probably damaging IRX4 chr5:1879920 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A114V SNV missense NA - PAPD7 chr5:6742685 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G416R SNV missense NA Probably damaging FASTKD3 chr5:7866951 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K290fs Indel frameshift_variant NA - TAS2R1 chr5:9629275 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G161V SNV missense NA Probably damaging FAM173B chr5:10235336 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q11L SNV missense NA Probably damaging ROPN1L chr5:10442311 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q11H SNV missense NA Probably damaging ROPN1L chr5:10442312 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L228P SNV missense NA Probably damaging FAM105B chr5:14690236 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P269S SNV missense NA Probably damaging FAM105B chr5:14690358 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y287C SNV missense NA Probably damaging MARCH11 chr5:16091024 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R717fs Indel frameshift_variant NA - ZFR chr5:32388774 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R2152Q SNV missense NA Probably damaging NIPBL chr5:37045656 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I2453T SNV missense NA Probably damaging NIPBL chr5:37057382 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D242H SNV missense NA Probably damaging WDR70 chr5:37479973 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R94W SNV missense NA Probably damaging GDNF chr5:37816160 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P1078fs Indel frameshift_variant NA - LIFR chr5:38481758 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R812X SNV stop_gained NA - LIFR chr5:38485984 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W13fs Indel frameshift_variant NA - LIFR chr5:38530710 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter263RextX? SNV stop_lost NA - TTC33 chr5:40716249 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M512fs Indel frameshift_variant NA - HCN1 chr5:45303784 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y407X SNV stop_gained NA - HCN1 chr5:45396603 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W281X SNV stop_gained NA - HCN1 chr5:45645293 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PARP8 chr5:50074393 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C250Y SNV missense NA Probably damaging FST chr5:52780854 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C77S SNV missense NA Probably damaging ESM1 chr5:54281116 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C57X SNV stop_gained NA - ESM1 chr5:54281175 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K113X SNV stop_gained NA - CDC20B chr5:54442474 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L161fs Indel frameshift_variant NA - CCNO chr5:54528273 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T644I SNV missense NA Probably damaging PLK2 chr5:57750537 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I634del Indel inframe_deletion NA Probably damaging PLK2 chr5:57750565 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y71C SNV missense NA Probably damaging ELOVL7 chr5:60067773 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W60X SNV stop_gained NA - RNF180 chr5:63507936 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L178X SNV stop_gained NA - RNF180 chr5:63509686 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R11fs Indel frameshift_variant NA - RGS7BP chr5:63802475 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - SREK1IP1 chr5:64064343 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G70V SNV missense NA - CWC27 chr5:64077817 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S375fs Indel frameshift_variant NA - CWC27 chr5:64267606 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G658S SNV missense NA Probably damaging ADAMTS6 chr5:64522008 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L444F SNV missense NA Probably damaging TNPO1 chr5:72183933 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K55N SNV missense NA Probably damaging FCHO2 chr5:72285293 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G259V SNV missense NA Probably damaging FCHO2 chr5:72313115 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E786Q SNV missense NA Possibly damaging FCHO2 chr5:72383526 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V298M SNV missense NA Probably damaging UTP15 chr5:72872781 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y220C SNV missense NA Probably damaging ENC1 chr5:73931652 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E141G SNV missense NA Probably damaging ENC1 chr5:73931889 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R344Q SNV missense NA Probably damaging GCNT4 chr5:74324832 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L143Q SNV missense NA Probably damaging OTP chr5:76932665 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R876X SNV stop_gained NA - AP3B1 chr5:77335050 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H16del Indel disruptive_inframe_deletion NA - PAPD4 chr5:78915514 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PAPD4 chr5:78915908 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R412C SNV missense NA Probably damaging PAPD4 chr5:78975427 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - DHFR chr5:79945292 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A57_A62dup Indel inframe_insertion NA - MSH3 chr5:79950708 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - MSH3 chr5:79966129 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E474fs Indel frameshift_variant NA - MSH3 chr5:80021349 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A505G SNV missense NA Probably damaging MSH3 chr5:80024730 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P783H SNV missense NA Probably damaging MSH3 chr5:80074568 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K210X SNV stop_gained NA - ATG10 chr5:81549209 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F337I SNV missense NA Probably damaging HAPLN1 chr5:82937371 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A310V SNV missense NA Probably damaging HAPLN1 chr5:82937451 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W296L SNV missense NA Probably damaging HAPLN1 chr5:82937493 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V160A SNV missense NA Probably damaging HAPLN1 chr5:82940478 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K293del Indel disruptive_inframe_deletion NA - CCNH chr5:86690913 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y86S SNV missense NA Probably damaging CCNH chr5:86705164 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I81F SNV missense NA Probably damaging CETN3 chr5:89701529 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G169S SNV missense NA Probably damaging MBLAC2 chr5:89757319 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L126X SNV stop_gained NA - POU5F2 chr5:93076893 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V173fs Indel frameshift_variant NA - KIAA0825 chr5:93856401 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K58fs Indel frameshift_variant NA - KIAA0825 chr5:93859757 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - EFNA5 chr5:106763143 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N55S SNV missense NA Possibly damaging EFNA5 chr5:106763172 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P526T SNV missense NA Probably damaging PJA2 chr5:108698617 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q297X SNV stop_gained NA - PJA2 chr5:108714299 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P47S SNV missense NA Probably damaging PJA2 chr5:108717297 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - SRP19 chr5:112200217 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G138fs Indel frameshift_variant NA - SRP19 chr5:112203204 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q288X SNV stop_gained NA - DCP2 chr5:112339694 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G524fs Indel frameshift_variant NA - CCDC112 chr5:114603589 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P509fs Indel frameshift_variant NA - CCDC112 chr5:114604601 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R141X SNV stop_gained NA - CDO1 chr5:115142198 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q129X SNV stop_gained NA - CDO1 chr5:115146876 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G100V SNV missense NA Probably damaging CDO1 chr5:115146962 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H92P SNV missense NA Probably damaging CDO1 chr5:115146986 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T59S SNV missense NA Probably damaging CDO1 chr5:115148950 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - ATG12 chr5:115173423 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F103S SNV missense NA Probably damaging TNFAIP8 chr5:118728751 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V170A SNV missense NA Probably damaging TNFAIP8 chr5:118728952 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H214Y SNV missense NA Probably damaging PRR16 chr5:120022129 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q209fs Indel frameshift_variant NA - LOX chr5:121413055 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - ZNF474 chr5:121487686 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T174I SNV missense NA Probably damaging ZNF474 chr5:121488206 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - CSNK1G3 chr5:122888806 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - CSNK1G3 chr5:122888842 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - CSNK1G3 chr5:122893246 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S246C SNV missense NA Probably damaging CSNK1G3 chr5:122923824 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K360del Indel disruptive_inframe_deletion NA Probably damaging CSNK1G3 chr5:122927099 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W370X SNV stop_gained NA - CSNK1G3 chr5:122930756 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A200T SNV missense NA Probably damaging GRAMD3 chr5:125813450 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T189I SNV missense NA Probably damaging MARCH3 chr5:126213914 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E76Q SNV missense NA Probably damaging MARCH3 chr5:126250789 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M248fs Indel frameshift_variant NA - PRRC1 chr5:126866072 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q62X SNV stop_gained NA - HINT1 chr5:130498297 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S910fs Indel frameshift_variant NA - FNIP1 chr5:131007407 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - FNIP1 chr5:131008619 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R309C SNV missense NA Probably damaging PDLIM4 chr5:131607854 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - C5orf56 chr5:131755634 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V108G SNV missense NA Probably damaging IRF1 chr5:131822687 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V690G SNV missense NA Probably damaging SHROOM1 chr5:132159099 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E359fs Indel frameshift_variant NA Probably damaging SHROOM1 chr5:132160470 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K28N SNV missense NA Probably damaging VDAC1 chr5:133328030 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D75E SNV missense NA Probably damaging SAR1B chr5:133948400 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L427_L428dup Indel disruptive_inframe_insertion NA - DDX46 chr5:134120167 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N187fs Indel frameshift_variant NA - C5orf24 chr5:134191149 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y148dup Indel disruptive_inframe_insertion NA - TXNDC15 chr5:134223719 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y60X SNV stop_gained NA - CXCL14 chr5:134914150 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V460fs Indel frameshift_variant NA - SIL1 chr5:138282835 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SRA1 chr5:139931771 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D255H SNV missense NA Probably damaging CD14 chr5:140011806 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter102CextX? SNV stop_lost NA - TMCO6 chr5:140021344 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E416X SNV stop_gained NA - TMCO6 chr5:140024185 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F71fs Indel frameshift_variant NA - NDUFA2 chr5:140025262 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S680del Indel disruptive_inframe_deletion NA - PCDHA4 chr5:140188804 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G629fs Indel frameshift_variant NA - PCDHA6 chr5:140209559 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y810X SNV stop_gained NA - PCDHA8 chr5:140223336 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S547fs Indel frameshift_variant NA - PCDHA9 chr5:140229713 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V134fs Indel frameshift_variant NA - PCDHA10 chr5:140236032 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S509X SNV stop_gained NA - PCDHA13 chr5:140263379 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H67fs Indel frameshift_variant NA - PCDHB5 chr5:140515214 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G63fs Indel frameshift_variant NA - PCDHB15 chr5:140625330 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R236fs Indel frameshift_variant NA - SLC25A2 chr5:140682727 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D225N SNV missense NA Probably damaging TAF7 chr5:140698939 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T84fs Indel frameshift_variant NA Probably damaging TAF7 chr5:140699361 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y522X SNV stop_gained NA - PCDHGA2 chr5:140720104 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q640X SNV stop_gained NA - PCDHGA2 chr5:140720456 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E789X SNV stop_gained NA - PCDHGA6 chr5:140756015 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q454X SNV stop_gained NA - PCDHGB6 chr5:140789129 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q685X SNV stop_gained NA - PCDHGB6 chr5:140789822 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V236fs Indel frameshift_variant NA - PCDHGA10 chr5:140793444 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A700fs Indel frameshift_variant NA - PCDHGA10 chr5:140794840 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q6X SNV stop_gained NA - PCDHGA11 chr5:140800810 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D480fs Indel frameshift_variant NA - PCDHGA12 chr5:140811759 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E78X SNV stop_gained NA - PCDHGC3 chr5:140855915 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T353fs Indel frameshift_variant NA - PCDHGC3 chr5:140856738 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K444_H445delinsN Indel disruptive_inframe_deletion NA - RNF14 chr5:141364461 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H445Q SNV missense NA Probably damaging RNF14 chr5:141364466 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V267E SNV missense NA Probably damaging SPRY4 chr5:141693943 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K36fs Indel frameshift_variant NA - SPINK7 chr5:147693680 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C53fs Indel frameshift_variant NA - SPINK9 chr5:147718047 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R60X SNV stop_gained NA - GRPEL2 chr5:148727935 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ARHGEF37 chr5:148989260 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R171M SNV missense NA - ARHGEF37 chr5:148996183 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y395X SNV stop_gained NA - ARHGEF37 chr5:149001475 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I377fs Indel frameshift_variant NA - TIGD6 chr5:149374783 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R407X SNV stop_gained NA - CAMK2A chr5:149607773 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K215X SNV stop_gained NA - TCOF1 chr5:149751572 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A905G SNV missense NA Probably damaging SYNPO chr5:150029819 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q39X SNV stop_gained NA - SLC36A1 chr5:150838468 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L419P SNV missense NA Probably damaging SLC36A1 chr5:150867640 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F85C SNV missense NA Probably damaging NMUR2 chr5:151784421 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S293I SNV missense NA Probably damaging MFAP3 chr5:153433062 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - GALNT10 chr5:153709256 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y276X SNV stop_gained NA - GALNT10 chr5:153760081 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - GALNT10 chr5:153795487 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K167M SNV missense NA Probably damaging HAND1 chr5:153857069 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S112C SNV missense NA Probably damaging HAND1 chr5:153857235 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M117T SNV missense NA Probably damaging MRPL22 chr5:154336705 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y191X SNV stop_gained NA - MRPL22 chr5:154346331 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P203fs Indel frameshift_variant NA - MRPL22 chr5:154346361 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q221fs Indel frameshift_variant NA - MRPL22 chr5:154346418 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R176X SNV stop_gained NA - THG1L chr5:157161741 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L220W SNV missense NA Probably damaging THG1L chr5:157164926 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging THG1L chr5:157165003 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R269W SNV missense NA Probably damaging THG1L chr5:157166398 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T289fs Indel frameshift_variant NA - CCNJL chr5:159682578 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T316M SNV missense NA Probably damaging C1QTNF2 chr5:159776221 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N302K SNV missense NA Probably damaging C1QTNF2 chr5:159776262 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G106A SNV missense NA Probably damaging C1QTNF2 chr5:159781837 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E345X SNV stop_gained NA - C5orf54 chr5:159821465 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P61S SNV missense NA Probably damaging SLU7 chr5:159841469 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I59T SNV missense NA Probably damaging SLU7 chr5:159841474 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M199V SNV missense NA Probably damaging GABRG2 chr5:161528287 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y211X SNV stop_gained NA - GABRG2 chr5:161530896 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R227X SNV stop_gained NA - FBXW11 chr5:171318581 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H257Q SNV missense NA Probably damaging DUSP1 chr5:172196098 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - ATP6V0E1 chr5:172410865 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P447T SNV missense NA Probably damaging PDLIM7 chr5:176910680 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R165C SNV missense NA Probably damaging PDLIM7 chr5:176918053 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - NHP2 chr5:177580563 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - ZNF354B chr5:178293244 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R458X SNV stop_gained NA - ZNF354B chr5:178310825 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T229fs Indel frameshift_variant NA - ZNF454 chr5:178392089 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H262R SNV missense NA Probably damaging ZNF454 chr5:178392190 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L592del Indel disruptive_inframe_deletion NA - GRM6 chr5:178413479 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D1274fs Indel frameshift_variant NA - FLT4 chr5:180036041 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - FLT4 chr5:180058681 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W150X SNV stop_gained NA - OR2V1 chr5:180551855 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E46del Indel inframe_deletion NA - IRF4 chr6:393284 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E46K SNV missense NA Probably damaging IRF4 chr6:393288 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - LY86 chr6:6626534 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P487L SNV missense NA Probably damaging RREB1 chr6:7229792 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C792W SNV missense NA Probably damaging RREB1 chr6:7230708 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F1604L SNV missense NA Probably damaging RREB1 chr6:7248784 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L568X SNV stop_gained NA - CAGE1 chr6:7373349 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - BLOC1S5-TXNDC5 chr6:8026599 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TFAP2A chr6:10415173 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - TMEM14B chr6:10756698 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - RP11-637O19.3 chr6:10906289 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y161X SNV stop_gained NA - ERVFRD-1 chr6:11105061 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G211E SNV missense NA - ADTRP chr6:11723608 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S221fs Indel frameshift_variant NA - RNF182 chr6:13978009 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - JARID2 chr6:15468798 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E802K SNV missense NA Probably damaging JARID2 chr6:15501596 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M833I SNV missense NA Probably damaging JARID2 chr6:15504781 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y1184X SNV stop_gained NA - JARID2 chr6:15517493 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S171F SNV missense NA Probably damaging GMPR chr6:16274692 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y125X SNV stop_gained NA - FAM8A1 chr6:17601015 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I378S SNV missense NA Probably damaging FAM8A1 chr6:17608461 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V407L SNV missense NA Probably damaging FAM8A1 chr6:17608547 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y21X SNV stop_gained NA - NRSN1 chr6:24134618 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E118G SNV missense NA Probably damaging GMNN chr6:24784393 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - FAM65B chr6:24850029 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C218F SNV missense NA Probably damaging FAM65B chr6:24852822 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R216L SNV missense NA Probably damaging FAM65B chr6:24852828 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R173W SNV missense NA Probably damaging FAM65B chr6:24865576 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - HIST1H2BB chr6:26043883 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q126X SNV stop_gained NA - HIST1H3C chr6:26046014 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P39fs Indel frameshift_variant NA - HIST1H1E chr6:26156726 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K140del Indel inframe_deletion NA - HIST1H1E chr6:26157032 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K200fs Indel frameshift_variant NA - HIST1H1E chr6:26157214 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P201fs Indel frameshift_variant NA - HIST1H1E chr6:26157215 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E114fs Indel frameshift_variant NA - HIST1H2BE chr6:26184361 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C97X SNV stop_gained NA - HIST1H3D chr6:26197188 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y84X SNV stop_gained NA - HIST1H2BH chr6:26252130 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A145fs Indel frameshift_variant NA - BTN3A3 chr6:26444530 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K10X SNV stop_gained NA - HIST1H2AH chr6:27114935 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W85X SNV stop_gained NA - PRSS16 chr6:27216896 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter93CextX? SNV stop_lost NA - PRSS16 chr6:27216920 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y186F SNV missense NA Probably damaging PRSS16 chr6:27218551 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging PRSS16 chr6:27222653 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q492X SNV stop_gained NA - PRSS16 chr6:27222908 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q509X SNV stop_gained NA - PRSS16 chr6:27223074 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C97X SNV stop_gained NA - HIST1H3H chr6:27778142 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R3X SNV stop_gained NA - HIST1H3I chr6:27840087 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E106fs Indel frameshift_variant NA - HIST1H2BO chr6:27861557 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R20X SNV stop_gained NA - OR2B6 chr6:27925076 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D203fs Indel frameshift_variant NA - ZSCAN31 chr6:28294556 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - GPX6 chr6:28473478 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P157S SNV missense NA Probably damaging GPX5 chr6:28501747 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging GPX5 chr6:28501840 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S232X SNV stop_gained NA - ZNF311 chr6:28964084 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R122fs Indel frameshift_variant NA - OR2B3 chr6:29054661 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E6X SNV stop_gained NA - OR2B3 chr6:29055010 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q98X SNV stop_gained NA - OR12D3 chr6:29342773 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y58X SNV stop_gained NA - OR12D3 chr6:29342891 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D288fs Indel frameshift_variant NA - MAS1L chr6:29454816 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C131Y SNV missense NA Probably damaging GABBR1 chr6:29598318 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V428fs Indel frameshift_variant NA - ZFP57 chr6:29640604 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S390fs Indel frameshift_variant NA - ZFP57 chr6:29640715 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q99X SNV stop_gained NA - TRIM31 chr6:30080288 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TRIM40 chr6:30105159 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L289fs Indel frameshift_variant NA - TRIM39 chr6:30308110 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S256C SNV missense NA Probably damaging GNL1 chr6:30521168 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - MUC21 chr6:30951737 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S405fs Indel frameshift_variant NA - CDSN chr6:31084178 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q22X SNV stop_gained NA - PSORS1C1 chr6:31106453 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T29fs Indel frameshift_variant NA - PSORS1C1 chr6:31106471 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L120fs Indel frameshift_variant NA - C6orf25 chr6:31691707 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A131fs Indel frameshift_variant NA - C6orf25 chr6:31691743 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y54X SNV stop_gained NA - C6orf48 chr6:31807374 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q362X SNV stop_gained NA - NEU1 chr6:31827660 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - NEU1 chr6:31830553 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E1073G SNV missense NA Probably damaging EHMT2 chr6:31850734 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q1046H SNV missense NA Probably damaging EHMT2 chr6:31851166 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q188X SNV stop_gained NA - STK19 chr6:31940529 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - C4B chr6:31997116 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H86fs Indel frameshift_variant NA - PRRT1 chr6:32118446 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y42H SNV missense NA Probably damaging PPT2 chr6:32122477 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y248C SNV missense NA Probably damaging PPT2 chr6:32130359 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M77fs Indel frameshift_variant NA - EGFL8 chr6:32134482 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R219X SNV stop_gained NA - EGFL8 chr6:32135180 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H248fs Indel frameshift_variant NA - AGER chr6:32150658 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P152fs Indel frameshift_variant NA - PBX2 chr6:32156121 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E373del Indel disruptive_inframe_deletion NA - BTNL2 chr6:32362759 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R75X SNV stop_gained NA - HLA-DRA chr6:32410365 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D175N SNV missense NA Probably damaging B3GALT4 chr6:33245719 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P285S SNV missense NA Probably damaging WDR46 chr6:33255158 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S184G SNV missense NA Probably damaging WDR46 chr6:33255936 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R148H SNV missense NA Probably damaging WDR46 chr6:33256165 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y82C SNV missense NA Probably damaging PFDN6 chr6:33258212 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V294E SNV missense NA Probably damaging TAPBP chr6:33272403 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P187del Indel inframe_deletion NA Probably damaging TAPBP chr6:33273072 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y472X SNV stop_gained NA - ZBTB9 chr6:33424293 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R400W SNV missense NA Probably damaging LEMD2 chr6:33744975 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter173LextX? SNV stop_lost NA - NUDT3 chr6:34256531 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R96del Indel disruptive_inframe_deletion NA - RPS10-NUDT3 chr6:34392480 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R241Q SNV missense NA Probably damaging PACSIN1 chr6:34497552 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q14X SNV stop_gained NA - C6orf106 chr6:34664341 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R177X SNV stop_gained NA - SNRPC chr6:34741333 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R126C SNV missense NA Probably damaging TAF11 chr6:34848098 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T49S SNV missense NA Probably damaging SCUBE3 chr6:35195417 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C583Y SNV missense NA Probably damaging SCUBE3 chr6:35210804 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P853L SNV missense NA Probably damaging SCUBE3 chr6:35213113 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D405N SNV missense NA Probably damaging PPARD chr6:35393743 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - TULP1 chr6:35471353 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E50fs Indel frameshift_variant NA - TULP1 chr6:35479998 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L23fs Indel frameshift_variant NA - TULP1 chr6:35480447 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y246X SNV stop_gained NA - PNPLA1 chr6:36263161 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G162E SNV missense NA Probably damaging KCTD20 chr6:36446948 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S395F SNV missense NA Probably damaging CPNE5 chr6:36714189 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F379L SNV missense NA Probably damaging CPNE5 chr6:36714238 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A51T SNV missense NA Probably damaging PI16 chr6:36922687 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E87fs Indel frameshift_variant NA Probably damaging PI16 chr6:36927006 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C356fs Indel frameshift_variant NA - MTCH1 chr6:36937747 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P133T SNV missense NA Probably damaging GLO1 chr6:38649857 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging GLO1 chr6:38654751 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W686X SNV stop_gained NA - KIF6 chr6:39328196 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - KIF6 chr6:39607385 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W20X SNV stop_gained NA - TSPO2 chr6:41010783 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W153X SNV stop_gained NA - TSPO2 chr6:41011822 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D183fs Indel frameshift_variant NA - APOBEC2 chr6:41029480 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - OARD1 chr6:41036635 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A339del Indel inframe_deletion NA - NFYA chr6:41065118 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D86G SNV missense NA Probably damaging TREM2 chr6:41129135 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K268_A269del Indel inframe_deletion NA - CCND3 chr6:41903749 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - CCND3 chr6:41908278 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S162F SNV missense NA Probably damaging GUCA1B chr6:42152671 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E191fs Indel frameshift_variant NA - PRPH2 chr6:42689501 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K11X SNV stop_gained NA - PRPH2 chr6:42690042 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F199L SNV missense NA Probably damaging RPL7L1 chr6:42854058 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R28fs Indel frameshift_variant NA - MEA1 chr6:42981072 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G186fs Indel frameshift_variant NA - DLK2 chr6:43418871 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K142X SNV stop_gained NA - MAD2L1BP chr6:43607773 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S485F SNV missense NA Probably damaging SLC29A1 chr6:44200701 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K481fs Indel frameshift_variant NA - HSP90AB1 chr6:44219597 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D96fs Indel frameshift_variant NA - SPATS1 chr6:44320608 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - GSTA5 chr6:52701033 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D153N SNV missense NA Probably damaging ELOVL5 chr6:53140008 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K60fs Indel frameshift_variant NA Probably damaging ELOVL5 chr6:53159170 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E151K SNV missense NA - MLIP chr6:53989469 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q808X SNV stop_gained NA - MLIP chr6:54025380 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - HCRTR2 chr6:55145120 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y70X SNV stop_gained NA - PRIM2 chr6:57185310 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W419C SNV missense NA Probably damaging SMAP1 chr6:71567920 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K131X SNV stop_gained NA - OGFRL1 chr6:72003305 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R444del Indel inframe_deletion NA - SYNCRIP chr6:86325013 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - ORC3 chr6:88304070 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E437Q SNV missense NA - ORC3 chr6:88346131 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G157R SNV missense NA Probably damaging CNR1 chr6:88854525 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K447fs Indel frameshift_variant NA - GABRR2 chr6:89967521 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D350N SNV missense NA Probably damaging GABRR2 chr6:89974244 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L129V SNV missense NA Probably damaging GABRR2 chr6:89978932 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RRAGD chr6:90082306 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P277S SNV missense NA Probably damaging RRAGD chr6:90087463 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E175X SNV stop_gained NA - RRAGD chr6:90090008 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R159C SNV missense NA Probably damaging FUT9 chr6:96651506 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L257P SNV missense NA Probably damaging FUT9 chr6:96651801 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D291N SNV missense NA Probably damaging FUT9 chr6:96651902 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y36X SNV stop_gained NA - PRDM13 chr6:100055018 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R140X SNV stop_gained NA - MCHR2 chr6:100390994 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S168X SNV stop_gained NA - BVES chr6:105573302 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T449I SNV missense NA Probably damaging QRSL1 chr6:107111040 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P131H SNV missense NA Probably damaging C6orf203 chr6:107361341 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging C6orf203 chr6:107361435 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P104H SNV missense NA Probably damaging SMPD2 chr6:109763263 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L269fs Indel frameshift_variant NA Probably damaging SMPD2 chr6:109764539 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - WASF1 chr6:110426784 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q272fs Indel frameshift_variant NA - FYN chr6:112021352 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - FYN chr6:112025201 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R123H SNV missense NA Probably damaging FYN chr6:112029200 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G117V SNV missense NA Probably damaging FYN chr6:112029218 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K226X SNV stop_gained NA - WISP3 chr6:112389440 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K327T SNV missense NA Probably damaging WISP3 chr6:112390684 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C355S SNV missense NA Probably damaging WISP3 chr6:112390768 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D482G SNV missense NA Probably damaging HDAC2 chr6:114265503 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D94N SNV missense NA Probably damaging VGLL2 chr6:117589543 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D173fs Indel frameshift_variant NA - SERINC1 chr6:122774989 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SERINC1 chr6:122779664 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L32del Indel inframe_deletion NA - TRDN chr6:123892203 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W382X SNV stop_gained NA - RNF217 chr6:125379117 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N234fs Indel frameshift_variant NA - KIAA0408 chr6:127768766 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A572dup Indel inframe_insertion NA - L3MBTL3 chr6:130415489 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N392fs Indel frameshift_variant NA - SAMD3 chr6:130467246 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L500fs Indel frameshift_variant NA - CTAGE9 chr6:132030658 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H262Y SNV missense NA Probably damaging PDE7B chr6:136495007 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R340S SNV missense NA Probably damaging PDE7B chr6:136502436 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S181N SNV missense NA Probably damaging HEBP2 chr6:138734139 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E179A SNV missense NA Probably damaging CCDC28A chr6:139101066 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E136X SNV stop_gained NA - HECA chr6:139487555 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E42G SNV missense NA Probably damaging PEX3 chr6:143780273 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y164C SNV missense NA Probably damaging PEX3 chr6:143792554 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L676fs Indel frameshift_variant NA - TAB2 chr6:149730794 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R316H SNV missense NA Probably damaging KATNA1 chr6:149919428 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V273F SNV missense NA Probably damaging KATNA1 chr6:149922801 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G249S SNV missense NA Probably damaging KATNA1 chr6:149922873 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y1129fs Indel frameshift_variant NA - LATS1 chr6:149982870 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F641fs Indel frameshift_variant NA - LATS1 chr6:150004298 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K622del Indel disruptive_inframe_deletion NA - LATS1 chr6:150004359 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L109fs Indel frameshift_variant NA - NUP43 chr6:150063701 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T283I SNV missense NA Probably damaging LRP11 chr6:150164184 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S126fs Indel frameshift_variant NA - RAET1L chr6:150342295 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P193L SNV missense NA Probably damaging FBXO5 chr6:153296282 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S182G SNV missense NA Probably damaging ZDHHC14 chr6:158014157 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F259C SNV missense NA Probably damaging ZDHHC14 chr6:158066792 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G172fs Indel frameshift_variant NA - WTAP chr6:160174550 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A198V SNV missense NA Possibly damaging QKI chr6:163983060 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D744del Indel disruptive_inframe_deletion NA - THBS2 chr6:169629694 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A230V SNV missense NA Probably damaging HEATR2 chr7:769393 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R350G SNV missense NA Probably damaging HEATR2 chr7:794249 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R376X SNV stop_gained NA - HEATR2 chr7:794327 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K775X SNV stop_gained NA - HEATR2 chr7:819673 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S142del Indel inframe_deletion NA - C7orf50 chr7:1037419 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E57X SNV stop_gained NA - C7orf50 chr7:1049740 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E790fs Indel frameshift_variant NA - ELFN1 chr7:1786600 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S275L SNV missense NA - AP5Z1 chr7:4824572 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q307H SNV missense NA - AP5Z1 chr7:4824669 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D317fs Indel frameshift_variant NA - AP5Z1 chr7:4825058 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L500fs Indel frameshift_variant NA - AP5Z1 chr7:4827823 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter614fs Indel frameshift_variant NA - AP5Z1 chr7:4829878 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - AP5Z1 chr7:4830745 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q2696X SNV stop_gained NA - TNRC18 chr7:5352436 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - FSCN1 chr7:5643028 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - FSCN1 chr7:5644992 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A489T SNV missense NA Probably damaging ICA1 chr7:8153627 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L218fs Indel frameshift_variant NA Probably damaging ICA1 chr7:8198210 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A148S SNV missense NA Probably damaging ICA1 chr7:8258072 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K111N SNV missense NA Probably damaging NXPH1 chr7:8790916 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I167fs Indel frameshift_variant NA - SOSTDC1 chr7:16502367 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P118S SNV missense NA Probably damaging SOSTDC1 chr7:16502514 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L26P SNV missense NA Probably damaging TSPAN13 chr7:16815849 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R44X SNV stop_gained NA - TSPAN13 chr7:16815902 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R96X SNV stop_gained NA - CCDC126 chr7:23682597 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K668del Indel inframe_deletion NA - STK31 chr7:23821072 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H846R SNV missense NA Probably damaging STK31 chr7:23827648 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S9fs Indel frameshift_variant NA - SKAP2 chr7:26904024 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R110P SNV missense NA Probably damaging WIPF3 chr7:29918730 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L79P SNV missense NA Probably damaging FKBP14 chr7:30062394 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W473C SNV missense NA - PLEKHA8 chr7:30113727 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V478F SNV missense NA - PLEKHA8 chr7:30113740 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PLEKHA8 chr7:30113750 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - MTURN chr7:30174915 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E118del Indel inframe_deletion NA - MTURN chr7:30197116 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D61G SNV missense NA Probably damaging INMT chr7:30793374 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H129L SNV missense NA - AQP1 chr7:30951730 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D315H SNV missense NA Probably damaging KBTBD2 chr7:32909886 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L17del Indel disruptive_inframe_deletion NA Probably damaging KBTBD2 chr7:32919166 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L36fs Indel frameshift_variant NA - FKBP9 chr7:32997291 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q149X SNV stop_gained NA - FKBP9 chr7:33014293 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RP9 chr7:33140175 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R188del Indel disruptive_inframe_deletion NA - NPSR1 chr7:34867094 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K271N SNV missense NA Probably damaging NPSR1 chr7:34884563 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T394fs Indel frameshift_variant NA - HERPUD2 chr7:35673341 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S59L SNV missense NA Probably damaging HERPUD2 chr7:35712860 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - AOAH chr7:36662795 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - AOAH chr7:36698769 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y334C SNV missense NA Probably damaging GLI3 chr7:42079664 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P282S SNV missense NA Probably damaging GLI3 chr7:42079821 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E219fs Indel frameshift_variant NA - STK17A chr7:43659287 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D130fs Indel frameshift_variant NA - UBE2D4 chr7:43990280 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E87D SNV missense NA benign DBNL chr7:44092474 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P266L SNV missense NA Probably damaging DBNL chr7:44098517 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R386H SNV missense NA Probably damaging DBNL chr7:44099729 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G416C SNV missense NA Probably damaging DBNL chr7:44100441 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - CAMK2B chr7:44298514 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F386L SNV missense NA Probably damaging CCM2 chr7:45115416 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R895Q SNV missense NA Probably damaging ADCY1 chr7:45743311 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D905E SNV missense NA Probably damaging ADCY1 chr7:45743342 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C270Y SNV missense NA Probably damaging IGFBP3 chr7:45954504 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R220G SNV missense NA Probably damaging IGFBP3 chr7:45956257 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R45X SNV stop_gained NA - C7orf65 chr7:47698353 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W108X SNV stop_gained NA - C7orf65 chr7:47698694 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y50X SNV stop_gained NA - C7orf69 chr7:47857665 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P304L SNV missense NA Probably damaging ZPBP chr7:50022988 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T66del Indel disruptive_inframe_deletion NA Probably damaging ZPBP chr7:50129233 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E513fs Indel frameshift_variant NA - IKZF1 chr7:50468298 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F29C SNV missense NA Probably damaging VSTM2A chr7:54612321 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G41W SNV missense NA Probably damaging VSTM2A chr7:54612356 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging VSTM2A chr7:54614638 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging VSTM2A chr7:54617526 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S196Y SNV missense NA Probably damaging VSTM2A chr7:54617816 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y37fs Indel frameshift_variant NA - VOPP1 chr7:55588766 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E272X SNV stop_gained NA - ZNF679 chr7:63726825 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E349fs Indel frameshift_variant NA - TYW1B chr7:72209498 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_acceptor_variant NA - TYW1B chr7:72209579 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W133X SNV stop_gained NA - FZD9 chr7:72848736 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A23V SNV missense NA Probably damaging WBSCR22 chr7:73098116 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R42X SNV stop_gained NA - WBSCR22 chr7:73101003 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - WBSCR22 chr7:73105343 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G182C SNV missense NA Probably damaging WBSCR22 chr7:73107692 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q5X SNV stop_gained NA - ABHD11 chr7:73153115 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C24G SNV missense NA Probably damaging CLDN3 chr7:73184310 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P425L SNV missense NA Probably damaging GTF2IRD1 chr7:73944151 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P429L SNV missense NA Probably damaging GTF2IRD1 chr7:73944163 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R598W SNV missense NA Possibly damaging GTF2IRD1 chr7:73960103 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R645H SNV missense NA Probably damaging GTF2IRD1 chr7:73961538 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging GTF2IRD1 chr7:73969825 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D556fs Indel frameshift_variant NA - GTF2IRD2B chr7:74563919 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - AC018720.10 chr7:75130875 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C137fs Indel frameshift_variant NA - HSPB1 chr7:75933160 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SRCRB4D chr7:76028036 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q158fs Indel frameshift_variant NA - POMZP3 chr7:76240874 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E217X SNV stop_gained NA - PHTF2 chr7:77539599 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PHTF2 chr7:77584173 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - GNAI1 chr7:79818542 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K367X SNV stop_gained NA - DBF4 chr7:87536552 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - SRI chr7:87838690 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter510LextX? SNV stop_lost NA - CYP51A1 chr7:91742980 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - CYP51A1 chr7:91747832 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P154L SNV missense NA Probably damaging CYP51A1 chr7:91758201 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S72F SNV missense NA Probably damaging CYP51A1 chr7:91761164 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M308fs Indel frameshift_variant NA - RBM48 chr7:92164187 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M361fs Indel frameshift_variant NA - CALCR chr7:93065437 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T89fs Indel frameshift_variant NA - BET1 chr7:93623675 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - BET1 chr7:93623698 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G68D SNV missense NA Probably damaging BET1 chr7:93625617 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H20L SNV missense NA Probably damaging ACN9 chr7:96747094 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L7fs Indel frameshift_variant NA - ARPC1A chr7:98930991 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F169S SNV missense NA Probably damaging ARPC1B chr7:98988521 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - GS1-259H13.10 chr7:99158183 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R123X SNV stop_gained NA - ZSCAN25 chr7:99217596 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C408Y SNV missense NA - ZSCAN25 chr7:99227231 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K515E SNV missense NA Probably damaging ZKSCAN1 chr7:99631671 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R120W SNV missense NA Probably damaging TAF6 chr7:99711547 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R44fs Indel frameshift_variant NA Probably damaging TAF6 chr7:99711873 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G93fs Indel frameshift_variant NA - LAMTOR4 chr7:99751563 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N255fs Indel frameshift_variant NA - PILRA chr7:99997206 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - EPHB4 chr7:100410452 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y471C SNV missense NA Probably damaging EPHB4 chr7:100416152 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F111C SNV missense NA Probably damaging EPHB4 chr7:100421345 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - RP11-395B7.2 chr7:100607770 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L192H SNV missense NA Probably damaging SERPINE1 chr7:100775225 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging SERPINE1 chr7:100775323 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q227X SNV stop_gained NA - SERPINE1 chr7:100775329 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S89I SNV missense NA Probably damaging AP1S1 chr7:100800014 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - MYL10 chr7:101256941 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P155Q SNV missense NA Probably damaging MYL10 chr7:101259569 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R303C SNV missense NA Probably damaging SH2B2 chr7:101950052 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T269N SNV missense NA Probably damaging ALKBH4 chr7:102097944 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M193T SNV missense NA Probably damaging ALKBH4 chr7:102098172 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L180fs Indel frameshift_variant NA Probably damaging ALKBH4 chr7:102098211 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA Probably damaging ALKBH4 chr7:102105158 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W388X SNV stop_gained NA - NAPEPLD chr7:102755618 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - DPY19L2P2 chr7:102898050 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A169T SNV missense NA Probably damaging PRKAR2B chr7:106781316 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S345W SNV missense NA Probably damaging PRKAR2B chr7:106797680 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R20X SNV stop_gained NA - GPR22 chr7:107114563 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R150X SNV stop_gained NA - GPR22 chr7:107114953 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y49C SNV missense NA Probably damaging DUS4L chr7:107211619 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L347fs Indel frameshift_variant NA - THAP5 chr7:108204782 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y223H SNV missense NA Probably damaging IFRD1 chr7:112102104 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N426S SNV missense NA Probably damaging IFRD1 chr7:112115495 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S265F SNV missense NA Probably damaging MDFIC chr7:114619810 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M321fs Indel frameshift_variant NA - WNT2 chr7:116918331 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N86K SNV missense NA Probably damaging WNT2 chr7:116960673 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - NAA38 chr7:117825706 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G178E SNV missense NA Probably damaging ANKRD7 chr7:117876099 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - FAM3C chr7:121012194 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G275A SNV missense NA Probably damaging GPR37 chr7:124404207 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E294X SNV stop_gained NA - LRRC4 chr7:127669814 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L178F SNV missense NA Probably damaging LRRC4 chr7:127670160 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N133S SNV missense NA Probably damaging LRRC4 chr7:127670296 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P47L SNV missense NA Probably damaging LRRC4 chr7:127670554 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter64GextX? SNV stop_lost NA - HILPDA chr7:128097512 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G285fs Indel frameshift_variant NA - METTL2B chr7:128138131 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K219fs Indel frameshift_variant NA - FAM71F1 chr7:128359101 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G103R SNV missense NA Probably damaging OPN1SW chr7:128415538 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H526fs Indel frameshift_variant NA - TMEM209 chr7:129810295 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R413K SNV missense NA Probably damaging TMEM209 chr7:129818250 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - SSMEM1 chr7:129847751 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S152F SNV missense NA Probably damaging CPA2 chr7:129912986 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D203Y SNV missense NA Probably damaging CPA2 chr7:129916489 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R181W SNV missense NA Probably damaging CPA1 chr7:130023289 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R234P SNV missense NA Probably damaging CPA1 chr7:130024381 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N254S SNV missense NA Probably damaging CPA1 chr7:130024441 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S170fs Indel frameshift_variant NA - TSGA13 chr7:130357595 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R186del Indel inframe_deletion NA - KLF14 chr7:130418302 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K86N SNV missense NA Probably damaging MKLN1 chr7:131071968 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E176X SNV stop_gained NA - TMEM140 chr7:134849719 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G121fs Indel frameshift_variant NA - C7orf49 chr7:134851476 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S847X SNV stop_gained NA - ZC3HAV1 chr7:138739964 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W275X SNV stop_gained NA - KLRG2 chr7:139138387 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y316fs Indel frameshift_variant NA - SLC37A3 chr7:140048507 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L25fs Indel frameshift_variant NA - SLC37A3 chr7:140082249 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W440X SNV stop_gained NA - WEE2 chr7:141424924 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H210Y SNV missense NA Probably damaging TAS2R3 chr7:141464586 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G209fs Indel frameshift_variant NA - OR9A4 chr7:141619299 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y169X SNV stop_gained NA - PRSS58 chr7:141952361 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - TRBV24-1 chr7:142364235 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - TRBV28 chr7:142428506 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V85M SNV missense NA Probably damaging PRSS1 chr7:142459635 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D121G SNV missense NA Probably damaging PRSS1 chr7:142459744 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R646C SNV missense NA Probably damaging TRPV6 chr7:142569702 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A457V SNV missense NA Probably damaging TRPV6 chr7:142572326 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W45fs Indel frameshift_variant NA Probably damaging TRPV6 chr7:142575774 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R305fs Indel frameshift_variant NA - OR6V1 chr7:142750349 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PIP chr7:142836283 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W1547X SNV stop_gained NA - ARHGEF5 chr7:144076995 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G146fs Indel frameshift_variant NA - ATP6V0E2 chr7:149576559 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T134fs Indel frameshift_variant NA - ZBED6CL chr7:150027892 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - REPIN1 chr7:150068319 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F104fs Indel frameshift_variant NA - GIMAP4 chr7:150269423 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A125del Indel disruptive_inframe_deletion NA - GBX1 chr7:150864261 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G443C SNV missense NA Probably damaging SHH chr7:155595656 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G221R SNV missense NA Probably damaging SHH chr7:155596322 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K17M SNV missense NA Probably damaging FBXO25 chr8:363129 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q636X SNV stop_gained NA - XKR6 chr8:10755482 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R441Q SNV missense NA Probably damaging XKR6 chr8:10756066 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D348H SNV missense NA Probably damaging XKR6 chr8:10756346 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A138T SNV missense NA Probably damaging FAM167A chr8:11282115 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D157A SNV missense NA Probably damaging NEIL2 chr8:11637438 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P163T SNV missense NA Probably damaging NEIL2 chr8:11637455 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging NEIL2 chr8:11643470 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q891X SNV stop_gained NA - MTUS1 chr8:17542004 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - NAT1 chr8:18079752 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V155dup Indel inframe_insertion NA - NAT1 chr8:18079831 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - NAT1 chr8:18079950 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R213P SNV missense NA Probably damaging NAT1 chr8:18080008 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K748fs Indel frameshift_variant NA - PSD3 chr8:18490295 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P58S SNV missense NA Probably damaging LPL chr8:19805774 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R204Q SNV missense NA Probably damaging DOK2 chr8:21768191 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - FGF17 chr8:21900473 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - DMTN chr8:21926525 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L171fs Indel frameshift_variant NA - REEP4 chr8:21996479 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SORBS3 chr8:22429230 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A172fs Indel frameshift_variant NA - AC037459.4 chr8:22458654 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q224X SNV stop_gained NA - AC037459.4 chr8:22458817 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I296fs Indel frameshift_variant NA - C8orf58 chr8:22460056 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S145X SNV stop_gained NA - C8orf58 chr8:22460088 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W49C SNV missense NA Probably damaging CHMP7 chr8:23104355 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P29fs Indel frameshift_variant NA - BNIP3L chr8:26240724 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W95C SNV missense NA Probably damaging CCDC25 chr8:27606075 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E116X SNV stop_gained NA - PBK chr8:27679955 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G29X SNV stop_gained NA - ZNF395 chr8:28206335 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G312fs Indel frameshift_variant NA - HMBOX1 chr8:28902956 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R429X SNV stop_gained NA - HMBOX1 chr8:28908625 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - DCTN6 chr8:30032618 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R150C SNV missense NA Probably damaging DCTN6 chr8:30038120 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E311X SNV stop_gained NA - PURG chr8:30854147 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I87T SNV missense NA Probably damaging PURG chr8:30890039 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y68C SNV missense NA Probably damaging ZNF703 chr8:37553700 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R304L SNV missense NA Probably damaging BRF2 chr8:37702357 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q95fs Indel frameshift_variant NA - EIF4EBP1 chr8:37914736 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T524M SNV missense NA Probably damaging TACC1 chr8:38684768 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - IDO1 chr8:39775392 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L118fs Indel frameshift_variant NA - IDO1 chr8:39776381 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D138Y SNV missense NA Probably damaging IDO1 chr8:39776442 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging IDO1 chr8:39782812 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G96S SNV missense NA Probably damaging ZMAT4 chr8:40554827 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C90F SNV missense NA Probably damaging RNF170 chr8:42725200 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging RNF170 chr8:42742990 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - POTEA chr8:43197472 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E25del Indel disruptive_inframe_deletion NA - UBE2V2 chr8:48955633 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ST18 chr8:53030897 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ST18 chr8:53055489 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y383H SNV missense NA Probably damaging ST18 chr8:53079469 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E1387fs Indel frameshift_variant NA - RB1CC1 chr8:53555089 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C572fs Indel frameshift_variant NA - RB1CC1 chr8:53571508 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W311X SNV stop_gained NA - RB1CC1 chr8:53586475 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S307C SNV missense NA Probably damaging RB1CC1 chr8:53586487 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V59L SNV missense NA Probably damaging RB1CC1 chr8:53596470 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F71S SNV missense NA Probably damaging MOS chr8:57026330 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R138C SNV missense NA Probably damaging PLAG1 chr8:57079893 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L263X SNV stop_gained NA - UBXN2B chr8:59358582 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E29K SNV missense NA Probably damaging SDCBP chr8:59477614 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S31C SNV missense NA - CLVS1 chr8:62212477 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - CLVS1 chr8:62370963 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G132D SNV missense NA Probably damaging GGH chr8:63938821 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L241P SNV missense NA Probably damaging TTPA chr8:63973926 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P89R SNV missense NA Probably damaging TTPA chr8:63985586 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A433T SNV missense NA Probably damaging KCNB2 chr8:73848887 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S785fs Indel frameshift_variant NA Probably damaging KCNB2 chr8:73849942 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R338Q SNV missense NA Probably damaging STAU2 chr8:74515977 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A69G SNV missense NA Probably damaging STAU2 chr8:74600957 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A66V SNV missense NA Probably damaging STAU2 chr8:74600966 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K25fs Indel frameshift_variant NA - GDAP1 chr8:75262766 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L109X SNV stop_gained NA - GDAP1 chr8:75272387 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I186fs Indel frameshift_variant NA - GDAP1 chr8:75274190 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y173H SNV missense NA Probably damaging PI15 chr8:75757487 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R78H SNV missense NA Probably damaging HNF4G chr8:76456190 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L2482fs Indel frameshift_variant NA - ZFHX4 chr8:77766599 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S2804X SNV stop_gained NA - ZFHX4 chr8:77767568 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R3610X SNV stop_gained NA - ZFHX4 chr8:77776778 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L41fs Indel frameshift_variant NA - IL7 chr8:79710333 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q135X SNV stop_gained NA - MRPS28 chr8:80831376 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - MRPS28 chr8:80942269 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y129fs Indel frameshift_variant NA - FABP12 chr8:82437317 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G222E SNV missense NA Probably damaging ZFAND1 chr8:82615072 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - C8orf59 chr8:86129727 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L180fs Indel frameshift_variant NA - ATP6V0D2 chr8:87153736 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ATP6V0D2 chr8:87153759 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I267fs Indel frameshift_variant NA - CPNE3 chr8:87558886 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S450C SNV missense NA Probably damaging CPNE3 chr8:87568424 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D500E SNV missense NA Probably damaging PDP1 chr8:94935712 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S484fs Indel frameshift_variant NA - CDH17 chr8:95172300 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P320A SNV missense NA Probably damaging MTERFD1 chr8:97256248 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q99X SNV stop_gained NA - MTERFD1 chr8:97270624 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E175X SNV stop_gained NA - TSPYL5 chr8:98289550 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - MTDH chr8:98699686 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - NIPAL2 chr8:99206954 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P118L SNV missense NA Probably damaging NIPAL2 chr8:99264714 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G93S SNV missense NA Probably damaging NIPAL2 chr8:99264790 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - POLR2K chr8:101163585 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S153X SNV stop_gained NA - YWHAZ chr8:101936511 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - YWHAZ chr8:101961114 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - AZIN1 chr8:103846891 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y66H SNV missense NA Probably damaging AZIN1 chr8:103851958 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T714del Indel inframe_deletion NA - RIMS2 chr8:104987610 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K207dup Indel inframe_insertion NA - RSPO2 chr8:108913412 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C541fs Indel frameshift_variant NA - TRPS1 chr8:116616571 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter582WextX? SNV stop_lost NA - KLHL38 chr8:124657979 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E194K SNV missense NA Probably damaging KLHL38 chr8:124664587 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V206fs Indel frameshift_variant NA - FER1L6 chr8:124987479 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ZNF572 chr8:125987962 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T371M SNV missense NA Probably damaging LRRC6 chr8:133622440 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R173H SNV missense NA Probably damaging SLA chr8:134057315 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G288S SNV missense NA Probably damaging ST3GAL1 chr8:134472168 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C142R SNV missense NA Probably damaging ST3GAL1 chr8:134478216 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D76N SNV missense NA Probably damaging CHRAC1 chr8:141524546 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C49Y SNV missense NA Probably damaging PTP4A3 chr8:142435188 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y124X SNV stop_gained NA - LY6K chr8:143783112 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M138fs Indel frameshift_variant NA - LY6K chr8:143784521 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G106del Indel disruptive_inframe_deletion NA - LY6E chr8:144103122 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L499P SNV missense NA Probably damaging RHPN1 chr8:144463749 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K550X SNV stop_gained NA - RHPN1 chr8:144463989 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - EEF1D chr8:144671160 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W127X SNV stop_gained NA - NRBP2 chr8:144917732 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - NRBP2 chr8:144918201 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - GPAA1 chr8:145139623 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G372R SNV missense NA Probably damaging GPAA1 chr8:145139728 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V549fs Indel frameshift_variant NA Probably damaging GPAA1 chr8:145140806 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L238fs Indel frameshift_variant NA - FAM203A chr8:145193628 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L291fs Indel frameshift_variant NA - SCRT1 chr8:145557021 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - VPS28 chr8:145649653 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W141X SNV stop_gained NA - CYHR1 chr8:145689667 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - CYHR1 chr8:145690191 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - FOXH1 chr8:145700440 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R82H SNV missense NA Probably damaging FOXH1 chr8:145700574 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S397F SNV missense NA Probably damaging MFSD3 chr8:145736498 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q35fs Indel frameshift_variant NA - ZNF251 chr8:145979636 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y210C SNV missense NA Probably damaging DMRT1 chr9:894002 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S473X SNV stop_gained NA - DMRT2 chr9:1057005 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R21X SNV stop_gained NA - INSL4 chr9:5231584 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A108fs Indel frameshift_variant NA - RLN2 chr9:5300334 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A26V SNV missense NA Probably damaging NFIB chr9:14307473 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T25M SNV missense NA Probably damaging PLIN2 chr9:19126264 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - MLLT3 chr9:20456761 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y146C SNV missense NA Probably damaging IFNA21 chr9:21166175 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q182fs Indel frameshift_variant NA - IFNA17 chr9:21227628 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y113X SNV stop_gained NA - IFNA17 chr9:21227834 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L152fs Indel frameshift_variant NA - IFNA14 chr9:21239481 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L38fs Indel frameshift_variant NA - IFNA5 chr9:21305142 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C16X SNV stop_gained NA - IFNA5 chr9:21305208 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E164K SNV missense NA Probably damaging IFNA2 chr9:21384839 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A138V SNV missense NA Probably damaging DMRTA1 chr9:22447477 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E180X SNV stop_gained NA - DMRTA1 chr9:22447602 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P338Q SNV missense NA Probably damaging DMRTA1 chr9:22451408 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E380fs Indel frameshift_variant NA Probably damaging DMRTA1 chr9:22451531 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q40X SNV stop_gained NA - EQTN chr9:27296695 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H128Y SNV missense NA Probably damaging NDUFB6 chr9:32553879 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T36fs Indel frameshift_variant NA - TMEM215 chr9:32784276 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q96R SNV missense NA Probably damaging DCAF12 chr9:34125067 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E60X SNV stop_gained NA - DCAF12 chr9:34125176 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C14X SNV stop_gained NA - NUDT2 chr9:34339079 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D93fs Indel frameshift_variant NA - CNTFR chr9:34564639 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E62del Indel disruptive_inframe_deletion NA - DCTN3 chr9:34617961 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G131fs Indel frameshift_variant NA - ARID3C chr9:34625740 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A123fs Indel frameshift_variant NA - GALT chr9:34648386 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - GALT chr9:34648906 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C46fs Indel frameshift_variant NA - MSMP chr9:35753759 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T110M SNV missense NA Probably damaging OR13J1 chr9:35870070 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H89_H92dup Indel disruptive_inframe_insertion NA - HRCT1 chr9:35906544 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P222S SNV missense NA Probably damaging CLTA chr9:36211688 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - RNF38 chr9:36342357 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H346P SNV missense NA Probably damaging RNF38 chr9:36353201 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H156Y SNV missense NA Possibly damaging PAX5 chr9:37006479 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - GRHPR chr9:37428551 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N145fs Indel frameshift_variant NA - GRHPR chr9:37430768 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G134A SNV missense NA Probably damaging EXOSC3 chr9:37783984 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L507fs Indel frameshift_variant NA - CNTNAP3 chr9:39149931 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T518I SNV missense NA Probably damaging PGM5 chr9:71114216 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T127fs Indel frameshift_variant NA - TMEM252 chr9:71152306 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C22W SNV missense NA - TMEM252 chr9:71155665 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - FXN chr9:71679941 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A21G SNV missense NA Probably damaging FAM189A2 chr9:71986464 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A374G SNV missense NA Probably damaging FAM189A2 chr9:72003338 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N151S SNV missense NA Probably damaging C9orf40 chr9:77563097 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G95fs Indel frameshift_variant NA Probably damaging C9orf40 chr9:77567244 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P2087T SNV missense NA Probably damaging PRUNE2 chr9:79320931 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A568V SNV missense NA Probably damaging TLE1 chr9:84205846 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R565C SNV missense NA Possibly damaging TLE1 chr9:84205856 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P462T SNV missense NA Possibly damaging TLE1 chr9:84208137 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P387L SNV missense NA benign TLE1 chr9:84226778 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T115N SNV missense NA benign TLE1 chr9:84267157 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N421fs Indel frameshift_variant NA - UBQLN1 chr9:86281335 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P176L SNV missense NA Probably damaging GKAP1 chr9:86399665 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T12I SNV missense NA Probably damaging GKAP1 chr9:86421398 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - GOLM1 chr9:88694105 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P97fs Indel frameshift_variant NA - C9orf153 chr9:88842264 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SPTLC1 chr9:94797166 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A235T SNV missense NA Possibly damaging SPTLC1 chr9:94817764 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A121G SNV missense NA Possibly damaging SPTLC1 chr9:94842363 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N136K SNV missense NA Probably damaging ASPN chr9:95228833 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E526G SNV missense NA Probably damaging BICD2 chr9:95481350 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E358fs Indel frameshift_variant NA Probably damaging BICD2 chr9:95481854 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A250fs Indel frameshift_variant NA - SUSD3 chr9:95847005 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V132fs Indel frameshift_variant NA - NINJ1 chr9:95887255 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N506fs Indel frameshift_variant NA - FAM120A chr9:96289451 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P91S SNV missense NA Probably damaging CDC14B chr9:99327115 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging CDC14B chr9:99327763 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y126C SNV missense NA - AAED1 chr9:99413716 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P470L SNV missense NA Probably damaging NCBP1 chr9:100420957 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R91C SNV missense NA Probably damaging FOXE1 chr9:100616467 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F230C SNV missense NA Probably damaging CORO2A chr9:100894543 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - LPPR1 chr9:104079779 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M233K SNV missense NA Probably damaging ALDOB chr9:104187836 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P97S SNV missense NA Probably damaging TMEM38B chr9:108483837 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PALM2 chr9:112629853 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W3X SNV stop_gained NA - AKAP2 chr9:112810987 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A80V SNV missense NA Probably damaging SLC31A1 chr9:116021010 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A248D SNV missense NA Probably damaging TNFSF15 chr9:117552745 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y188D SNV missense NA Probably damaging TNFSF15 chr9:117552926 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S191fs Indel frameshift_variant NA - TNFSF8 chr9:117666341 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - PHF19 chr9:123627986 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R250G SNV missense NA Probably damaging LHX6 chr9:124976597 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L32fs Indel frameshift_variant NA - OR1J2 chr9:125273172 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S265fs Indel frameshift_variant NA - OR1J4 chr9:125282211 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M32fs Indel frameshift_variant NA - OR1N1 chr9:125289476 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I39fs Indel frameshift_variant NA - OR1Q1 chr9:125377122 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q234X SNV stop_gained NA - ZBTB26 chr9:125681514 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - NR5A1 chr9:127255404 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R114W SNV missense NA Probably damaging NR5A1 chr9:127262899 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - RPL35 chr9:127623696 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N355K SNV missense NA Probably damaging SCAI chr9:127765462 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y186D SNV missense NA Probably damaging SCAI chr9:127789116 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I146T SNV missense NA Probably damaging SCAI chr9:127790716 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I388T SNV missense NA Probably damaging HSPA5 chr9:128000940 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - MVB12B chr9:129148877 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V404fs Indel frameshift_variant NA - ZBTB43 chr9:129595994 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1fs Indel frameshift_variant NA - RALGPS1 chr9:129724567 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G158S SNV missense NA Probably damaging SLC2A8 chr9:130162231 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V328del Indel disruptive_inframe_deletion NA Probably damaging SLC2A8 chr9:130167098 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q137fs Indel frameshift_variant NA - RPL12 chr9:130210238 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q271X SNV stop_gained NA - NAIF1 chr9:130825880 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter925GextX? SNV stop_lost NA - CIZ1 chr9:130928478 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E532X SNV stop_gained NA - CIZ1 chr9:130940674 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S68fs Indel frameshift_variant NA - RP11-101E3.5 chr9:131715103 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y384C SNV missense NA Probably damaging GPR107 chr9:132866718 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R181W SNV missense NA Probably damaging EXOSC2 chr9:133577566 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R35fs Indel frameshift_variant NA - FAM78A chr9:134151463 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q511X SNV stop_gained NA - GTF3C4 chr9:135554537 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F173del Indel disruptive_inframe_deletion NA - GTF3C5 chr9:135919255 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V247fs Indel frameshift_variant NA - RPL7A chr9:136218157 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F176S SNV missense NA Probably damaging SURF2 chr9:136227150 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K238X SNV stop_gained NA - SURF2 chr9:136227956 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K238M SNV missense NA Probably damaging SURF2 chr9:136227957 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C50Y SNV missense NA - CACFD1 chr9:136328632 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W63X SNV stop_gained NA - CACFD1 chr9:136328672 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R397W SNV missense NA Probably damaging ADAMTSL2 chr9:136412258 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R594W SNV missense NA Probably damaging BRD3 chr9:136901310 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P24R SNV missense NA Probably damaging BRD3 chr9:136918529 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - FCN1 chr9:137801763 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N193fs Indel frameshift_variant NA - OLFM1 chr9:137990249 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T411M SNV missense NA Probably damaging OLFM1 chr9:138011798 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S98fs Indel frameshift_variant NA - GLT6D1 chr9:138516480 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N46del Indel disruptive_inframe_deletion NA - C9orf172 chr9:139739000 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y345del Indel disruptive_inframe_deletion NA - C9orf172 chr9:139739894 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C73R SNV missense NA Probably damaging MAMDC4 chr9:139747799 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging MAMDC4 chr9:139748361 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T1017K SNV missense NA Probably damaging MAMDC4 chr9:139752990 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - LCN12 chr9:139847342 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - LCNL1 chr9:139878161 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G386R SNV missense NA Probably damaging GRIN1 chr9:140052955 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S762W SNV missense NA Probably damaging GRIN1 chr9:140057671 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P788L SNV missense NA Probably damaging GRIN1 chr9:140057749 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K24R SNV missense NA Probably damaging MRPL41 chr9:140446604 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G37S SNV missense NA Probably damaging MRPL41 chr9:140446642 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C249fs Indel frameshift_variant NA - ZMYND11 chr10:286041 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G62R SNV missense NA Probably damaging AKR1C2 chr10:5043774 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A79T SNV missense NA Probably damaging ANKRD16 chr10:5931083 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q245X SNV stop_gained NA - ITIH5 chr10:7659165 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - ATP5C1 chr10:7830172 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y222X SNV stop_gained NA - GATA3 chr10:8100692 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C321S SNV missense NA Probably damaging GATA3 chr10:8111473 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q1206X SNV stop_gained NA - UPF2 chr10:11973712 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K873N SNV missense NA Probably damaging UPF2 chr10:11997462 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y808N SNV missense NA Probably damaging UPF2 chr10:11998471 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K184X SNV stop_gained NA - BEND7 chr10:13538787 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W154L SNV missense NA Probably damaging CDNF chr10:14862082 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q103X SNV stop_gained NA - SUV39H2 chr10:14938974 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E387X SNV stop_gained NA - DCLRE1C chr10:14951327 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C272S SNV missense NA Possibly damaging DCLRE1C chr10:14970117 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P185fs Indel frameshift_variant NA - OLAH chr10:15106492 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G214S SNV missense NA Probably damaging OLAH chr10:15107661 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A189G SNV missense NA Probably damaging C1QL3 chr10:16562499 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L90del Indel inframe_deletion NA - TMEM236 chr10:17813317 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V411fs Indel frameshift_variant NA - MLLT10 chr10:21962451 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T447fs Indel frameshift_variant NA - MLLT10 chr10:21962562 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E759G SNV missense NA Probably damaging MLLT10 chr10:22021885 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q1001X SNV stop_gained NA - MLLT10 chr10:22029004 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I408fs Indel frameshift_variant NA - COMMD3-BMI1 chr10:22618282 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H279Q SNV missense NA Probably damaging PTF1A chr10:23482685 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R161X SNV stop_gained NA - ENKUR chr10:25279505 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N104T SNV missense NA Probably damaging LYZL1 chr10:29581481 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L566fs Indel frameshift_variant NA - ZNF438 chr10:31137635 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C537Y SNV missense NA Probably damaging ZNF438 chr10:31137724 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L469fs Indel frameshift_variant NA Probably damaging ZNF438 chr10:31137927 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L37X SNV stop_gained NA - C10ORF68 chr10:32974964 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R413I SNV missense NA Probably damaging ITGB1 chr10:33209204 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y137F SNV missense NA Probably damaging CREM chr10:35467911 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R320X SNV stop_gained NA - CREM chr10:35500603 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P220fs Indel frameshift_variant NA - FZD8 chr10:35929694 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T636_A637insGT Indel disruptive_inframe_insertion NA - AGAP4 chr10:46321447 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L241P SNV missense NA - NPY4R chr10:47087505 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D168fs Indel frameshift_variant NA - ANXA8L2 chr10:47756039 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P166Q SNV missense NA Probably damaging ZNF488 chr10:48371029 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A165fs Indel frameshift_variant NA - PTPN20B chr10:48771404 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T33A SNV missense NA Probably damaging C10orf71 chr10:50530687 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R24X SNV stop_gained NA - NCOA4 chr10:51580695 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E138K SNV missense NA Probably damaging CSTF2T chr10:53458898 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S2X SNV stop_gained NA - CSTF2T chr10:53459305 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C91X SNV stop_gained NA - DKK1 chr10:54074712 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - DKK1 chr10:54076460 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C236F SNV missense NA Probably damaging MBL2 chr10:54527937 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N207K SNV missense NA Probably damaging MBL2 chr10:54528023 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G148R SNV missense NA Probably damaging IPMK chr10:59976010 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y90C SNV missense NA Probably damaging IPMK chr10:59997497 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T108fs Indel frameshift_variant NA - CISD1 chr10:60047402 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R17X SNV stop_gained NA - NRBF2 chr10:64905987 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q198X SNV stop_gained NA - NRBF2 chr10:64913706 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S85G SNV missense NA Probably damaging REEP3 chr10:65357854 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E283fs Indel frameshift_variant NA - PBLD chr10:70043954 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R259H SNV missense NA Probably damaging DDX21 chr10:70723215 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F3del Indel disruptive_inframe_deletion NA - SUPV3L1 chr10:70940052 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q32X SNV stop_gained NA - TACR2 chr10:71175986 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R161X SNV stop_gained NA - TSPAN15 chr10:71258063 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - H2AFY2 chr10:71860054 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - H2AFY2 chr10:71868839 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I24N SNV missense NA Probably damaging EIF4EBP2 chr10:72164228 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PCBD1 chr10:72643806 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - C10orf54 chr10:73515115 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - DDIT4 chr10:74034452 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G447R SNV missense NA Probably damaging P4HA1 chr10:74774011 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R311H SNV missense NA Probably damaging P4HA1 chr10:74806828 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L65fs Indel frameshift_variant NA - MRPS16 chr10:75011602 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - FUT11 chr10:75532094 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L15P SNV missense NA - AC022400.2 chr10:75532335 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F171L SNV missense NA Probably damaging FUT11 chr10:75532604 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P870H SNV missense NA Probably damaging NDST2 chr10:75562252 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R852W SNV missense NA Probably damaging NDST2 chr10:75562307 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W213X SNV stop_gained NA - SAMD8 chr10:76910736 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N35D SNV missense NA Probably damaging C10orf11 chr10:77795821 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L46X SNV stop_gained NA - C10orf11 chr10:77795855 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G188A SNV missense NA Probably damaging PPIF chr10:81113537 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C237X SNV stop_gained NA - ZCCHC24 chr10:81146116 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G95R SNV missense NA Probably damaging SFTPA1 chr10:81372133 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K263del Indel disruptive_inframe_deletion NA - SFTPD chr10:81697945 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H92D SNV missense NA - TMEM254 chr10:81841923 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T265del Indel disruptive_inframe_deletion NA - NRG3 chr10:83635879 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - NRG3 chr10:84118493 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R48X SNV stop_gained NA - NRG3 chr10:84118501 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E703fs Indel frameshift_variant NA - NRG3 chr10:84745298 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q107X SNV stop_gained NA - SNCG chr10:88722388 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - LIPN chr10:90521165 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D113G SNV missense NA Probably damaging LIPN chr10:90524278 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A156T SNV missense NA Probably damaging ANKRD1 chr10:92677575 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G594V SNV missense NA Probably damaging CPEB3 chr10:93841165 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L467P SNV missense NA Probably damaging CPEB3 chr10:93902839 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RBP4 chr10:95360562 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y225X SNV stop_gained NA - CYP2C18 chr10:96466573 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N277fs Indel frameshift_variant NA - CYP2C19 chr10:96580259 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - CYP2C8 chr10:96818196 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R353X SNV stop_gained NA - BLNK chr10:97959869 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V46fs Indel frameshift_variant NA - ARHGAP19-SLIT1 chr10:99025803 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - EXOSC1 chr10:99205711 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - PI4K2A chr10:99426203 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M201T SNV missense NA Probably damaging COX15 chr10:101483861 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L139Q SNV missense NA Probably damaging BLOC1S2 chr10:102035232 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D293_G295dup Indel inframe_insertion NA - WNT8B chr10:102242386 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G126V SNV missense NA Possibly damaging PDZD7 chr10:102783358 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S130X SNV stop_gained NA - KAZALD1 chr10:102822738 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q253E SNV missense NA Possibly damaging LDB1 chr10:103869240 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P829del Indel inframe_deletion NA - PPRC1 chr10:103900747 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N1322T SNV missense NA Probably damaging PPRC1 chr10:103906714 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H274P SNV missense NA Probably damaging PITX3 chr10:103990359 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N175S SNV missense NA Probably damaging PITX3 chr10:103990656 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R120G SNV missense NA Probably damaging PITX3 chr10:103990822 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_acceptor_variant NA - ARL3 chr10:104445759 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I92T SNV missense NA Probably damaging ARL3 chr10:104449690 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y296C SNV missense NA Probably damaging CALHM2 chr10:105206994 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S140X SNV stop_gained NA - CALHM2 chr10:105209280 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C130Y SNV missense NA Probably damaging CALHM2 chr10:105209310 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q249fs Indel frameshift_variant NA - SFR1 chr10:105885275 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C408R SNV missense NA Probably damaging ITPRIP chr10:106074588 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L171F SNV missense NA Probably damaging ITPRIP chr10:106075297 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S762C SNV missense NA Probably damaging SORCS1 chr10:108427466 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S718fs Indel frameshift_variant NA Probably damaging SORCS1 chr10:108431031 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H602Y SNV missense NA Probably damaging SORCS1 chr10:108437099 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P249Q SNV missense NA Probably damaging SORCS1 chr10:108536431 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K118fs Indel frameshift_variant NA - ADRA2A chr10:112838105 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W289C SNV missense NA Probably damaging ZDHHC6 chr10:114194091 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K1011X SNV stop_gained NA - DCLRE1A chr10:115595003 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I881M SNV missense NA Probably damaging DCLRE1A chr10:115602124 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I687fs Indel frameshift_variant NA Probably damaging DCLRE1A chr10:115608804 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W199X SNV stop_gained NA - ADRB1 chr10:115804488 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S264Y SNV missense NA Probably damaging FAM160B1 chr10:116602960 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R125fs Indel frameshift_variant NA - CCDC172 chr10:118101638 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - C10orf82 chr10:118423684 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q47fs Indel frameshift_variant NA - C10orf82 chr10:118425252 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P78L SNV missense NA Probably damaging HSPA12A chr10:118464683 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A78T SNV missense NA Probably damaging TIAL1 chr10:121342018 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T301R SNV missense NA Probably damaging NSMCE4A chr10:123720975 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P227L SNV missense NA Probably damaging NSMCE4A chr10:123724874 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A1815fs Indel frameshift_variant NA - DMBT1 chr10:124389809 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R102G SNV missense NA Probably damaging IKZF5 chr10:124755522 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter105SextX? SNV stop_lost NA - METTL10 chr10:126463333 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S182del Indel inframe_deletion NA - FAM175B chr10:126517407 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L43P SNV missense NA Probably damaging UROS chr10:127504765 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - BCCIP chr10:127519988 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P201L SNV missense NA Probably damaging C10orf90 chr10:128193458 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L200fs Indel frameshift_variant NA Probably damaging C10orf90 chr10:128193462 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P145H SNV missense NA Probably damaging GLRX3 chr10:131959217 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G211V SNV missense NA Probably damaging GLRX3 chr10:131964924 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging GLRX3 chr10:131973150 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G155D SNV missense NA Probably damaging BNIP3 chr10:133784217 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R204X SNV stop_gained NA - STK32C chr10:134041552 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S97Y SNV missense NA Probably damaging INPP5A chr10:134463993 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SCGB1C1 chr11:193155 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E15X SNV stop_gained NA - BET1L chr11:206020 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A56G SNV missense NA Probably damaging IFITM5 chr11:299324 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - PKP3 chr11:396972 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L137fs Indel frameshift_variant NA - LRRC56 chr11:549982 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E352fs Indel frameshift_variant NA - LRRC56 chr11:552098 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - LRRC56 chr11:553962 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W468X SNV stop_gained NA - LRRC56 chr11:554050 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R281fs Indel frameshift_variant NA - CDHR5 chr11:620334 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C98fs Indel frameshift_variant NA - CDHR5 chr11:624230 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D100N SNV missense NA Probably damaging PDDC1 chr11:773579 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R291H SNV missense NA Probably damaging SLC25A22 chr11:792015 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L84P SNV missense NA Probably damaging SLC25A22 chr11:793571 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G16C SNV missense NA Probably damaging SLC25A22 chr11:794876 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q331X SNV stop_gained NA - PIDD chr11:802380 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PIDD chr11:802681 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G22fs Indel frameshift_variant NA - EFCAB4A chr11:828666 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K154fs Indel frameshift_variant NA - KRTAP5-1 chr11:1606021 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C114fs Indel frameshift_variant NA - KRTAP5-4 chr11:1642983 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G186R SNV missense NA - RP11-295K3.1 chr11:1775250 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P174L SNV missense NA - RP11-295K3.1 chr11:1775285 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T297fs Indel frameshift_variant NA - SYT8 chr11:1858240 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P291L SNV missense NA Probably damaging CHRNA10 chr11:3688485 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q82X SNV stop_gained NA - CHRNA10 chr11:3688566 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter97CextX? SNV stop_lost NA - CHRNA10 chr11:3690559 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L202P SNV missense NA Probably damaging PGAP2 chr11:3845282 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter90YextX? SNV stop_lost NA - TRIM21 chr11:4406562 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P272fs Indel frameshift_variant NA - OR52M1 chr11:4567232 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C207S SNV missense NA Probably damaging OR52I1 chr11:4615815 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K238R SNV missense NA Probably damaging OR51E1 chr11:4674469 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C198R SNV missense NA Probably damaging OR51F1 chr11:4790577 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S149fs Indel frameshift_variant NA - OR51G1 chr11:4945124 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S151del Indel disruptive_inframe_deletion NA - OR51A4 chr11:4967876 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N289D SNV missense NA Probably damaging OR52E2 chr11:5079993 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S190fs Indel frameshift_variant NA Probably damaging OR52E2 chr11:5080288 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W33X SNV stop_gained NA - HBD chr11:5254316 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P125fs Indel frameshift_variant NA - HBG1 chr11:5269657 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A137fs Indel frameshift_variant NA - HBE1 chr11:5289734 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D44fs Indel frameshift_variant NA - HBE1 chr11:5290869 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C187Y SNV missense NA Probably damaging OR51B5 chr11:5364195 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T92fs Indel frameshift_variant NA - OR51M1 chr11:5410898 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I22fs Indel frameshift_variant NA - OR51I1 chr11:5462681 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - OR52N1 chr11:5810045 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I198M SNV missense NA Probably damaging OR52E8 chr11:5878339 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F307S SNV missense NA Probably damaging ILK chr11:6631018 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging ILK chr11:6631411 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T387I SNV missense NA Probably damaging ILK chr11:6631460 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging ILK chr11:6631833 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A119V SNV missense NA Probably damaging OR2AG2 chr11:6789833 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P79T SNV missense NA Probably damaging OR2AG1 chr11:6806503 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y252X SNV stop_gained NA - OR2D2 chr11:6912976 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G108E SNV missense NA Probably damaging OR2D2 chr11:6913409 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H244Y SNV missense NA Probably damaging OR10A6 chr11:7949480 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D524fs Indel frameshift_variant NA - NLRP10 chr11:7981589 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q504X SNV stop_gained NA - NLRP10 chr11:7981649 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H45Q SNV missense NA Probably damaging LMO1 chr11:8251942 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y35H SNV missense NA Probably damaging LMO1 chr11:8251974 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K730M SNV missense NA Probably damaging ST5 chr11:8732762 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y488C SNV missense NA Probably damaging ST5 chr11:8747634 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K167X SNV stop_gained NA - ST5 chr11:8752338 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - AKIP1 chr11:8934077 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G149fs Indel frameshift_variant NA - AKIP1 chr11:8938869 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K43N SNV missense NA Probably damaging ADM chr11:10327526 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R234P SNV missense NA Probably damaging BTBD10 chr11:13438715 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N217S SNV missense NA Probably damaging BTBD10 chr11:13438766 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R176X SNV stop_gained NA - BTBD10 chr11:13441089 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SPON1 chr11:14281248 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R179Q SNV missense NA Probably damaging RRAS2 chr11:14303157 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L70P SNV missense NA Probably damaging RRAS2 chr11:14317319 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D126del Indel inframe_deletion NA - C11orf58 chr11:16776468 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R221H SNV missense NA Probably damaging KCNJ11 chr11:17408977 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R54H SNV missense NA Probably damaging KCNJ11 chr11:17409478 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - SAA4 chr11:18257473 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V353M SNV missense NA Probably damaging TSG101 chr11:18503203 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K297fs Indel frameshift_variant NA - MRGPRX2 chr11:19077058 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P238S SNV missense NA Probably damaging MRGPRX2 chr11:19077238 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R513C SNV missense NA Probably damaging PRMT3 chr11:20529900 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q211dup Indel inframe_insertion NA - FANCF chr11:22646722 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q68fs Indel frameshift_variant NA - FANCF chr11:22647154 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G541R SNV missense NA Probably damaging KCNA4 chr11:30032605 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R225H SNV missense NA Probably damaging KCNA4 chr11:30033552 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C38F SNV missense NA Probably damaging FSHB chr11:30253562 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D89V SNV missense NA Probably damaging FSHB chr11:30255223 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S154F SNV missense NA Probably damaging MPPED2 chr11:30516918 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y71X SNV stop_gained NA - EHF chr11:34668035 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y170C SNV missense NA Probably damaging APIP chr11:34909843 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P289L SNV missense NA Probably damaging SLC1A2 chr11:35314059 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S194fs Indel frameshift_variant NA - FJX1 chr11:35640760 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L268fs Indel frameshift_variant NA - FJX1 chr11:35640981 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R194fs Indel frameshift_variant NA - TRIM44 chr11:35685238 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T115fs Indel frameshift_variant NA - LDLRAD3 chr11:36119897 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - COMMD9 chr11:36296189 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H91Y SNV missense NA Probably damaging COMMD9 chr11:36300073 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter523QextX? SNV stop_lost NA - TRAF6 chr11:36511390 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - TRAF6 chr11:36523065 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M11L SNV missense NA Probably damaging C11orf74 chr11:36631684 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K191E SNV missense NA Probably damaging C11orf74 chr11:36680641 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q200X SNV stop_gained NA - ACCS chr11:44098870 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y377S SNV missense NA Probably damaging ACCS chr11:44104737 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I60M SNV missense NA Probably damaging CD82 chr11:44626651 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G173D SNV missense NA Probably damaging PRDM11 chr11:45204604 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R225W SNV missense NA Probably damaging PRDM11 chr11:45241137 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T199P SNV missense NA Probably damaging SLC35C1 chr11:45832386 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S292R SNV missense NA Probably damaging CRY2 chr11:45889232 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R460H SNV missense NA Probably damaging CRY2 chr11:45891725 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q104X SNV stop_gained NA - MDK chr11:46404202 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q826X SNV stop_gained NA - AMBRA1 chr11:46515203 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A69T SNV missense NA Probably damaging AMBRA1 chr11:46568836 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R323Q SNV missense NA Probably damaging ARHGAP1 chr11:46701257 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L237fs Indel frameshift_variant NA Probably damaging ARHGAP1 chr11:46702222 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P260S SNV missense NA Probably damaging SLC39A13 chr11:47436018 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C400Y SNV missense NA Probably damaging PSMC3 chr11:47440677 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G138E SNV missense NA Probably damaging PSMC3 chr11:47446020 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T141fs Indel frameshift_variant NA - PTPMT1 chr11:47591416 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y27H SNV missense NA Probably damaging OR4X2 chr11:48266734 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C238fs Indel frameshift_variant NA - OR4X1 chr11:48286121 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter330KextX? SNV stop_lost NA - OR4C3 chr11:48347480 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D119E SNV missense NA Probably damaging OR4A47 chr11:48510701 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N281I SNV missense NA Probably damaging OR4C16 chr11:55340445 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T92fs Indel frameshift_variant NA - OR5D18 chr11:55587377 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F109S SNV missense NA Probably damaging OR5I1 chr11:55703551 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y35X SNV stop_gained NA - OR8H1 chr11:56058434 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A96fs Indel frameshift_variant NA - OR5R1 chr11:56185421 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y60X SNV stop_gained NA - OR5R1 chr11:56185529 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S241Y SNV missense NA Probably damaging OR5M3 chr11:56237252 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H311fs Indel frameshift_variant NA - OR5M1 chr11:56380048 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G233fs Indel frameshift_variant NA - OR5M1 chr11:56380280 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D121Y SNV missense NA Probably damaging OR5M1 chr11:56380618 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N187Y SNV missense NA Probably damaging OR9G4 chr11:56510729 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G167X SNV stop_gained NA - OR9G4 chr11:56510789 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S239X SNV stop_gained NA - OR5AK2 chr11:56757104 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R208X SNV stop_gained NA - LRRC55 chr11:56949989 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S12L SNV missense NA - RP11-872D17.8 chr11:57177552 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N325S SNV missense NA Probably damaging SERPING1 chr11:57373669 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C240Y SNV missense NA Probably damaging OR9Q1 chr11:57947635 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P285S SNV missense NA Probably damaging OR5B3 chr11:58170030 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter315LextX? SNV stop_lost NA - OR5B12 chr11:58206681 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F220fs Indel frameshift_variant NA - OR5B12 chr11:58206964 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - GLYATL1 chr11:58711017 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P79fs Indel frameshift_variant NA - OR10V1 chr11:59481082 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N185del Indel disruptive_inframe_deletion NA - GIF chr11:59608751 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D105G SNV missense NA Probably damaging GIF chr11:59610557 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L92P SNV missense NA Probably damaging GIF chr11:59610596 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C220X SNV stop_gained NA - MS4A6A chr11:59940576 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - CCDC86 chr11:60609599 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R59X SNV stop_gained NA - TMEM109 chr11:60687340 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L123fs Indel frameshift_variant NA - VPS37C chr11:60899992 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C407W SNV missense NA Probably damaging VWCE chr11:61048274 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_acceptor_variant NA - CYB561A3 chr11:61118620 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q339X SNV stop_gained NA - PPP1R32 chr11:61254684 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R547X SNV stop_gained NA - DAGLA chr11:61505662 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q400X SNV stop_gained NA - BEST1 chr11:61730004 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - FTH1 chr11:61734844 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S84fs Indel frameshift_variant NA - ROM1 chr11:62381003 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y93X SNV stop_gained NA - ROM1 chr11:62381032 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R329X SNV stop_gained NA - BSCL2 chr11:62458772 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SLC22A10 chr11:63058040 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S16fs Indel frameshift_variant NA - LGALS12 chr11:63273907 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N111S SNV missense NA Probably damaging LGALS12 chr11:63276354 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C113G SNV missense NA Probably damaging HRASLS2 chr11:63325914 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - MACROD1 chr11:63766474 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N232K SNV missense NA Probably damaging FLRT1 chr11:63884435 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I100N SNV missense NA Probably damaging TRPT1 chr11:63992301 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L31fs Indel frameshift_variant NA Probably damaging TRPT1 chr11:63993036 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E209Q SNV missense NA Probably damaging SF1 chr11:64537867 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q65X SNV stop_gained NA - SSSCA1 chr11:65338378 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G127X SNV stop_gained NA - SSSCA1 chr11:65338984 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S173F SNV missense NA Probably damaging SSSCA1 chr11:65339123 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y228C SNV missense NA Probably damaging MAP3K11 chr11:65380545 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G82S SNV missense NA Probably damaging MAP3K11 chr11:65380984 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W16X SNV stop_gained NA - MAP3K11 chr11:65381181 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L253F SNV missense NA Probably damaging EFEMP2 chr11:65636071 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q230X SNV stop_gained NA - EFEMP2 chr11:65637367 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q55X SNV stop_gained NA - DRAP1 chr11:65687466 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - CATSPER1 chr11:65789235 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y309fs Indel frameshift_variant NA - CATSPER1 chr11:65792926 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q271fs Indel frameshift_variant NA - SF3B2 chr11:65825552 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I564T SNV missense NA Probably damaging SF3B2 chr11:65828114 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R609Q SNV missense NA Probably damaging PACS1 chr11:66000525 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P41S SNV missense NA Probably damaging CNIH2 chr11:66049769 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P327T SNV missense NA Probably damaging B3GNT1 chr11:66114038 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y335X SNV stop_gained NA - NPAS4 chr11:66191366 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F273L SNV missense NA Probably damaging ZDHHC24 chr11:66307036 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G182fs Indel frameshift_variant NA - ACTN3 chr11:66321548 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R809X SNV stop_gained NA - ACTN3 chr11:66329613 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A259fs Indel frameshift_variant NA - RBM14-RBM4 chr11:66411355 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R201fs Indel frameshift_variant NA - RHOD chr11:66839020 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P82fs Indel frameshift_variant NA - POLD4 chr11:67120215 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G326V SNV missense NA Probably damaging CORO1B chr11:67207619 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G58S SNV missense NA Probably damaging CORO1B chr11:67209928 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F157S SNV missense NA Probably damaging TMEM134 chr11:67232309 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T855fs Indel frameshift_variant NA - PITPNM1 chr11:67262614 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R340X SNV stop_gained NA - PITPNM1 chr11:67267430 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E96fs Indel frameshift_variant NA - NUDT8 chr11:67396430 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y158X SNV stop_gained NA - UNC93B1 chr11:67767069 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K272fs Indel frameshift_variant NA - C11orf24 chr11:68029645 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G44A SNV missense NA Probably damaging GAL chr11:68453111 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - MRPL21 chr11:68660357 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P52T SNV missense NA Probably damaging MRPL21 chr11:68665473 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging MRPL21 chr11:68668074 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C40X SNV stop_gained NA - MRGPRD chr11:68748336 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L929Q SNV missense NA Probably damaging PPFIA1 chr11:70208515 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P119_C120insCCCQSSCCKP Indel disruptive_inframe_insertion NA - KRTAP5-7 chr11:71238675 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T123P SNV missense NA Probably damaging RNF121 chr11:71693930 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - IL18BP chr11:71711396 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R16X SNV stop_gained NA - LAMTOR1 chr11:71810299 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W198X SNV stop_gained NA - FOLR3 chr11:71850501 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G172X SNV stop_gained NA - FOLR1 chr11:71906961 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y36C SNV missense NA Probably damaging FAM168A chr11:73141779 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D308fs Indel frameshift_variant NA - POLD3 chr11:74340280 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C626W SNV missense NA Probably damaging RNF169 chr11:74547526 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A73T SNV missense NA Probably damaging NEU3 chr11:74705676 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A277D SNV missense NA Probably damaging NEU3 chr11:74716981 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V317fs Indel frameshift_variant NA Probably damaging NEU3 chr11:74717098 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S410G SNV missense NA Probably damaging KLHL35 chr11:75136584 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P149S SNV missense NA Probably damaging MOGAT2 chr11:75438654 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I232fs Indel frameshift_variant NA - ACER3 chr11:76727813 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R195Q SNV missense NA Probably damaging RSF1 chr11:77436739 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - AAMDC chr11:77583305 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L134W SNV missense NA Probably damaging INTS4 chr11:77690112 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K463N SNV missense NA Probably damaging NARS2 chr11:78147761 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - RAB30 chr11:82705119 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R194L SNV missense NA Probably damaging TAF1D chr11:93470284 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E764fs Indel frameshift_variant NA - AMOTL1 chr11:94599133 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R108K SNV missense NA Probably damaging SESN3 chr11:94924587 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E315fs Indel frameshift_variant NA - FAM76B chr11:95504800 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K206X SNV stop_gained NA - FAM76B chr11:95512847 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E497X SNV stop_gained NA - CCDC82 chr11:96092234 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E175del Indel disruptive_inframe_deletion NA - CCDC82 chr11:96117384 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R31S SNV missense NA Probably damaging CCDC82 chr11:96117819 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P353A SNV missense NA Probably damaging YAP1 chr11:102094377 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W265R SNV missense NA Probably damaging BIRC3 chr11:102196033 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A214T SNV missense NA Probably damaging MMP27 chr11:102567546 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CASP4 chr11:104819405 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - MSANTD4 chr11:105881181 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - AASDHPPT chr11:105948438 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L65fs Indel frameshift_variant NA - AASDHPPT chr11:105950203 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P92Q SNV missense NA Probably damaging AASDHPPT chr11:105950285 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K128X SNV stop_gained NA - RAB39A chr11:107832826 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E194X SNV stop_gained NA - C11orf65 chr11:108264086 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D272fs Indel frameshift_variant NA - PIH1D2 chr11:111938727 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A234fs Indel frameshift_variant NA - PIH1D2 chr11:111941272 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L128fs Indel frameshift_variant NA - PIH1D2 chr11:111941921 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T89fs Indel frameshift_variant NA - PIH1D2 chr11:111942392 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F137S SNV missense NA Probably damaging IL18 chr11:112014491 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging IL18 chr11:112020909 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I196S SNV missense NA - AP002884.3 chr11:112071363 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - AMICA1 chr11:118081428 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G45X SNV stop_gained NA - MPZL3 chr11:118111033 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - RP11-770J1.5 chr11:118272381 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F507L SNV missense NA Probably damaging ARCN1 chr11:118468578 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q27X SNV stop_gained NA - CCDC84 chr11:118868986 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CCDC84 chr11:118881930 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q85P SNV missense NA Probably damaging H2AFX chr11:118965851 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L556fs Indel frameshift_variant NA - MFRP chr11:119212332 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P165L SNV missense NA Probably damaging MFRP chr11:119216277 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R18fs Indel frameshift_variant NA - THY1 chr11:119291081 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q84H SNV missense NA Probably damaging ZNF202 chr11:123601345 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - OR8D1 chr11:124180660 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - ESAM chr11:124632048 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V88fs Indel frameshift_variant NA - HEPN1 chr11:124789906 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N104Y SNV missense NA Probably damaging HEPACAM chr11:124794741 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R22X SNV stop_gained NA - SLC37A2 chr11:124946657 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G200R SNV missense NA Probably damaging EI24 chr11:125450025 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L191F SNV missense NA Probably damaging TIRAP chr11:126162875 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G131fs Indel frameshift_variant NA - C11orf45 chr11:128772497 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q82X SNV stop_gained NA - TP53AIP1 chr11:128807470 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R688W SNV missense NA Probably damaging PRDM10 chr11:129788598 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K679N SNV missense NA Probably damaging PRDM10 chr11:129793152 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K642N SNV missense NA Probably damaging PRDM10 chr11:129793263 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P209R SNV missense NA Probably damaging PRDM10 chr11:129814802 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA Probably damaging PRDM10 chr11:129830857 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SNX19 chr11:130776519 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E627V SNV missense NA Probably damaging SNX19 chr11:130780199 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V3fs Indel frameshift_variant NA - NTM chr11:131781377 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G268A SNV missense NA Possibly damaging NTM chr11:132184466 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SPATA19 chr11:133712458 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D2295V SNV missense NA Probably damaging WNK1 chr12:998331 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R88W SNV missense NA Probably damaging TEAD4 chr12:3120205 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y314C SNV missense NA Probably damaging TEAD4 chr12:3147177 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K378Q SNV missense NA Probably damaging TEAD4 chr12:3149366 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E13G SNV missense NA Probably damaging C12orf5 chr12:4440451 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G93R SNV missense NA Probably damaging C12orf5 chr12:4460439 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - FGF23 chr12:4488595 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E64fs Indel frameshift_variant NA - VAMP1 chr12:6575103 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N839fs Indel frameshift_variant NA - NOP2 chr12:6666180 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y603C SNV missense NA Probably damaging NOP2 chr12:6669344 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R601C SNV missense NA Probably damaging NOP2 chr12:6669351 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E196X SNV stop_gained NA - LPAR5 chr12:6729829 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q244X SNV stop_gained NA - ING4 chr12:6760381 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L120P SNV missense NA Probably damaging COPS7A chr12:6838444 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - CD4 chr12:6909306 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N313fs Indel frameshift_variant NA - CD4 chr12:6925549 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P100L SNV missense NA Probably damaging PEX5 chr12:7343874 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S621L SNV missense NA Probably damaging PEX5 chr12:7362698 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C621R SNV missense NA Probably damaging CD163 chr12:7640144 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging CD163 chr12:7654059 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S238del Indel inframe_deletion NA - C3AR1 chr12:8212067 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - FAM90A1 chr12:8375381 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - CLEC4E chr12:8687284 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N120S SNV missense NA Probably damaging MFAP5 chr12:8802147 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R212fs Indel frameshift_variant NA - RIMKLB chr12:8906622 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R45Q SNV missense NA Probably damaging PHC1 chr12:9072371 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T322fs Indel frameshift_variant NA Probably damaging PHC1 chr12:9083379 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E943K SNV missense NA Probably damaging PHC1 chr12:9090623 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - CLEC2D chr12:9840581 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R29X SNV stop_gained NA - CLEC2B chr12:10010225 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E85K SNV missense NA - TMEM52B chr12:10339134 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W132X SNV stop_gained NA - KLRC4-KLRK1 chr12:10560306 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PRR4 chr12:10999967 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S43del Indel disruptive_inframe_deletion NA - TAS2R19 chr12:11175042 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M209fs Indel frameshift_variant NA - TAS2R31 chr12:11183309 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W66X SNV stop_gained NA - TAS2R43 chr12:11244631 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q244del Indel disruptive_inframe_deletion NA - PRB4 chr12:11461185 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter280RextX? SNV stop_lost NA - APOLD1 chr12:12940584 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G67E SNV missense NA Probably damaging RASSF8 chr12:26217527 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - TM7SF3 chr12:27127161 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q7fs Indel frameshift_variant NA - REP15 chr12:27849512 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C49fs Indel frameshift_variant NA - REP15 chr12:27849636 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T108I SNV missense NA Probably damaging PTHLH chr12:28116482 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E43G SNV missense NA Probably damaging BICD1 chr12:32260393 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D316N SNV missense NA Probably damaging BICD1 chr12:32458997 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter828RextX? SNV stop_lost NA Probably damaging BICD1 chr12:32491741 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - DNM1L chr12:32854495 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - DNM1L chr12:32866233 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R486C SNV missense NA Probably damaging DNM1L chr12:32884848 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q595X SNV stop_gained NA - DNM1L chr12:32893034 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H685Y SNV missense NA Probably damaging DNM1L chr12:32895542 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I323M SNV missense NA - GXYLT1 chr12:42491731 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M116fs Indel frameshift_variant NA - GXYLT1 chr12:42512941 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N302S SNV missense NA Probably damaging ARID2 chr12:46230656 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S682X SNV stop_gained NA - ARID2 chr12:46243951 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C1667Y SNV missense NA Probably damaging ARID2 chr12:46285640 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L166H SNV missense NA Probably damaging SLC38A1 chr12:46601004 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L489V SNV missense NA Probably damaging SLC38A4 chr12:47162170 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R362fs Indel frameshift_variant NA Probably damaging SLC38A4 chr12:47170775 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y224N SNV missense NA Probably damaging SLC38A4 chr12:47173441 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L216H SNV missense NA Probably damaging SLC38A4 chr12:47173574 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - ENDOU chr12:48110130 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R24fs Indel frameshift_variant NA - OR10AD1 chr12:48597005 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L142X SNV stop_gained NA - LALBA chr12:48961744 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D46G SNV missense NA - AC073610.5 chr12:49332764 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H81P SNV missense NA Probably damaging WNT10B chr12:49363967 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R402W SNV missense NA Probably damaging MCRS1 chr12:49953006 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E227del Indel inframe_deletion NA Probably damaging MCRS1 chr12:49957244 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA Probably damaging MCRS1 chr12:49957313 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - FAIM2 chr12:50283263 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F190L SNV missense NA Possibly damaging SMARCD1 chr12:50481184 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E395G SNV missense NA Probably damaging SMARCD1 chr12:50488270 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter516QextX? SNV stop_lost NA Probably damaging SMARCD1 chr12:50492781 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G269E SNV missense NA Probably damaging TMPRSS12 chr12:51281055 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S9del Indel inframe_deletion NA - SMAGP chr12:51663035 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y370fs Indel frameshift_variant NA - GRASP chr12:52408899 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S429fs Indel frameshift_variant NA - KRT80 chr12:52565255 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K427del Indel inframe_deletion NA - KRT80 chr12:52565259 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q347fs Indel frameshift_variant NA - KRT80 chr12:52566118 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S51X SNV stop_gained NA - KRT80 chr12:52585535 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T410fs Indel frameshift_variant NA - KRT83 chr12:52709711 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - KRT85 chr12:52757850 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G560_Y566del Indel disruptive_inframe_deletion NA - KRT1 chr12:53069214 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G555fs Indel frameshift_variant NA - KRT1 chr12:53069236 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I203S SNV missense NA Possibly damaging KRT18 chr12:53344641 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Possibly damaging KRT18 chr12:53345641 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R370W SNV missense NA Probably damaging SPRYD3 chr12:53460381 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R78X SNV stop_gained NA - SPRYD3 chr12:53470948 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R387Q SNV missense NA Probably damaging RARG chr12:53606886 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N165K SNV missense NA Probably damaging RARG chr12:53608371 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K136N SNV missense NA Probably damaging RARG chr12:53609144 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T349I SNV missense NA Probably damaging SP7 chr12:53722180 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q316L SNV missense NA Possibly damaging PCBP2 chr12:53865474 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q316H SNV missense NA Probably damaging PCBP2 chr12:53865475 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - ATP5G2 chr12:54069836 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W147S SNV missense NA Probably damaging OR6C6 chr12:55688577 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W409X SNV stop_gained NA - SUOX chr12:56398399 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - RNF41 chr12:56600329 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P6del Indel inframe_deletion NA - COQ10A chr12:56661507 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L390V SNV missense NA Probably damaging GLS2 chr12:56868384 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L344fs Indel frameshift_variant NA Probably damaging GLS2 chr12:56868648 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A343fs Indel frameshift_variant NA Probably damaging GLS2 chr12:56868650 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M341fs Indel frameshift_variant NA Probably damaging GLS2 chr12:56868652 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging GLS2 chr12:56874172 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W23X SNV stop_gained NA - GLS2 chr12:56881835 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q68X SNV stop_gained NA - RDH16 chr12:57351045 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G42R SNV missense NA Probably damaging RDH16 chr12:57351123 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V430fs Indel frameshift_variant NA - ZBTB39 chr12:57397412 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R137fs Indel frameshift_variant NA - DDIT3 chr12:57910761 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SLC26A10 chr12:58014716 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G410R SNV missense NA Probably damaging B4GALNT1 chr12:58021557 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E375A SNV missense NA Probably damaging B4GALNT1 chr12:58021924 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L374Q SNV missense NA Probably damaging B4GALNT1 chr12:58021927 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging B4GALNT1 chr12:58022047 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D312E SNV missense NA Probably damaging B4GALNT1 chr12:58022562 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R139X SNV stop_gained NA - CDK4 chr12:58144813 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y103N SNV missense NA Probably damaging CDK4 chr12:58145037 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V20A SNV missense NA Probably damaging CDK4 chr12:58145442 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N184fs Indel frameshift_variant NA - LEMD3 chr12:65563924 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G489X SNV stop_gained NA - LEMD3 chr12:65564841 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R625X SNV stop_gained NA - LEMD3 chr12:65632546 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R626H SNV missense NA Probably damaging LEMD3 chr12:65632550 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E812G SNV missense NA Probably damaging LEMD3 chr12:65639496 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA Probably damaging LEMD3 chr12:65639718 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q144P SNV missense NA Probably damaging TMBIM4 chr12:66539654 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y39C SNV missense NA Probably damaging TMBIM4 chr12:66547210 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel protein_protein_contact NA - DYRK2 chr12:68051801 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N69del Indel disruptive_inframe_deletion NA - IL22 chr12:68646587 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - IL22 chr12:68647105 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PTPRR chr12:71056387 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - PTPRR chr12:71077948 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - PTPRR chr12:71094943 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L147X SNV stop_gained NA - PTPRR chr12:71158476 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V221fs Indel frameshift_variant NA - ZFC3H1 chr12:72051016 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L220fs Indel frameshift_variant NA - THAP2 chr12:72070858 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - RP11-81K13.1 chr12:75434923 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W117R SNV missense NA Probably damaging GLIPR1L1 chr12:75737647 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R244X SNV stop_gained NA - GLIPR1L2 chr12:75816829 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G221fs Indel frameshift_variant NA - SYT1 chr12:79693180 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PAWR chr12:79988108 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P91fs Indel frameshift_variant NA - RASSF9 chr12:86199517 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N1186fs Indel frameshift_variant NA - ATP2B1 chr12:89984866 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S851G SNV missense NA Probably damaging ATP2B1 chr12:89998015 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A105T SNV missense NA Probably damaging ATP2B1 chr12:90036028 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A195V SNV missense NA Probably damaging DCN chr12:91550920 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W15R SNV missense NA benign DCN chr12:91572287 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E29fs Indel frameshift_variant NA - PLEKHG7 chr12:93134710 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PLEKHG7 chr12:93139253 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D99N SNV missense NA Probably damaging PLEKHG7 chr12:93139347 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging PLEKHG7 chr12:93148041 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging PLEKHG7 chr12:93162857 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SOCS2 chr12:93966814 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - PLXNC1 chr12:94543744 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PLXNC1 chr12:94603364 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PLXNC1 chr12:94653111 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y1386X SNV stop_gained NA - PLXNC1 chr12:94692491 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S150C SNV missense NA Probably damaging ELK3 chr12:96640959 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P63L SNV missense NA Probably damaging TMPO chr12:98909833 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D68E SNV missense NA Possibly damaging TMPO chr12:98909849 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E489fs Indel frameshift_variant NA Possibly damaging TMPO chr12:98927498 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N692fs Indel frameshift_variant NA Possibly damaging TMPO chr12:98928107 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L326fs Indel frameshift_variant NA Possibly damaging TMPO chr12:98938824 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L67P SNV missense NA Probably damaging SLC25A3 chr12:98989253 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L147X SNV stop_gained NA - SLC25A3 chr12:98991791 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G213R SNV missense NA Probably damaging SLC5A8 chr12:101587458 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G73D SNV missense NA Probably damaging SLC5A8 chr12:101603409 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R97X SNV stop_gained NA - ARL1 chr12:101794887 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S263fs Indel frameshift_variant NA - C12orf42 chr12:103696182 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - C12orf42 chr12:103696338 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R110W SNV missense NA Probably damaging NFYB chr12:104517105 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E121G SNV missense NA Probably damaging KIAA1033 chr12:105509002 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N209fs Indel frameshift_variant NA Probably damaging KIAA1033 chr12:105514941 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R330X SNV stop_gained NA - KIAA1033 chr12:105520090 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F805L SNV missense NA Probably damaging KIAA1033 chr12:105540825 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging KIAA1033 chr12:105557887 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E559X SNV stop_gained NA - NUAK1 chr12:106460891 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R177W SNV missense NA Probably damaging NUAK1 chr12:106477692 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H176R SNV missense NA Probably damaging NUAK1 chr12:106477694 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R101X SNV stop_gained NA - NUAK1 chr12:106500243 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L276V SNV missense NA Possibly damaging RFX4 chr12:107090190 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A456G SNV missense NA Probably damaging RFX4 chr12:107114643 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - RAD9B chr12:110940144 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter430RextX? SNV stop_lost NA - RAD9B chr12:110969432 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G287E SNV missense NA Probably damaging ALDH2 chr12:112229929 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K383fs Indel frameshift_variant NA Probably damaging ALDH2 chr12:112235941 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - TRAFD1 chr12:112572607 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R453X SNV stop_gained NA - TRAFD1 chr12:112589682 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L62P SNV missense NA - RITA1 chr12:113624664 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I52F SNV missense NA Probably damaging IQCD chr12:113645818 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G262fs Indel frameshift_variant NA - LHX5 chr12:113905116 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R718Q SNV missense NA Probably damaging KSR2 chr12:117962723 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R709W SNV missense NA Probably damaging KSR2 chr12:117962751 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G372D SNV missense NA Probably damaging WSB2 chr12:118472152 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G322R SNV missense NA Probably damaging WSB2 chr12:118473050 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - PEBP1 chr12:118582480 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SUDS3 chr12:118841215 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SRRM4 chr12:119583491 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S25fs Indel frameshift_variant NA - PRKAB1 chr12:120106122 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P280_V281insH Indel disruptive_inframe_insertion NA - RPLP0 chr12:120634690 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P280fs Indel frameshift_variant NA - RPLP0 chr12:120634692 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - COX6A1 chr12:120876033 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q662X SNV stop_gained NA - HNF1A chr12:121438990 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PSMD9 chr12:122353764 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - MLXIP chr12:122625631 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - VPS33A chr12:122717488 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - VPS33A chr12:122745960 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T414S SNV missense NA Probably damaging RSRC2 chr12:122990138 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K91del Indel disruptive_inframe_deletion NA - VPS37B chr12:123355445 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y42X SNV stop_gained NA - RILPL2 chr12:123920842 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RILPL1 chr12:123983313 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q329X SNV stop_gained NA - SCARB1 chr12:125292331 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T267I SNV missense NA Probably damaging SCARB1 chr12:125294762 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P264fs Indel frameshift_variant NA Probably damaging SCARB1 chr12:125294773 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H232R SNV missense NA Probably damaging SCARB1 chr12:125296447 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q112X SNV stop_gained NA - FZD10 chr12:130647821 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D1345V SNV missense NA Probably damaging GOLGA3 chr12:133351836 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S983P SNV missense NA Probably damaging GOLGA3 chr12:133363101 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q965X SNV stop_gained NA - GOLGA3 chr12:133363292 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q710X SNV stop_gained NA - GOLGA3 chr12:133372779 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R553fs Indel frameshift_variant NA - ZNF605 chr12:133502324 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K169E SNV missense NA Probably damaging ZDHHC20 chr13:21974601 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P120fs Indel frameshift_variant NA - C1QTNF9B chr13:24466070 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q91delinsHTer Indel stop_gained NA - C1QTNF9B chr13:24466157 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q91delinsHTer Indel stop_gained NA - C1QTNF9 chr13:24895176 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R1107fs Indel frameshift_variant NA - RNF17 chr13:25425704 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E17fs Indel frameshift_variant NA - CDK8 chr13:26828825 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R112X SNV stop_gained NA - MTIF3 chr13:28014252 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H808Y SNV missense NA - MTUS2 chr13:29608208 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I376M SNV missense NA Probably damaging KATNAL1 chr13:30801568 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - HSPH1 chr13:31712543 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W763X SNV stop_gained NA - HSPH1 chr13:31712632 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F658C SNV missense NA Probably damaging HSPH1 chr13:31714334 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L144fs Indel frameshift_variant NA - N4BP2L1 chr13:32978374 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F79fs Indel frameshift_variant NA - N4BP2L1 chr13:32981855 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L191R SNV missense NA Probably damaging KL chr13:33591150 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H193R SNV missense NA Probably damaging KL chr13:33591156 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F366I SNV missense NA Probably damaging KL chr13:33628180 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W458C SNV missense NA Probably damaging KL chr13:33629227 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G526R SNV missense NA Probably damaging KL chr13:33629429 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q722K SNV missense NA Probably damaging KL chr13:33635380 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P763T SNV missense NA Probably damaging KL chr13:33635503 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A898P SNV missense NA Probably damaging KL chr13:33635908 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - DCLK1 chr13:36699992 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R82X SNV stop_gained NA - DCLK1 chr13:36700031 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - DCLK1 chr13:36700091 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L114F SNV missense NA Probably damaging CSNK1A1L chr13:37679054 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D279Y SNV missense NA Probably damaging MRPS31 chr13:41323397 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q336fs Indel frameshift_variant NA - KBTBD6 chr13:41705640 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R223Q SNV missense NA Probably damaging TNFSF11 chr13:43180768 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q439P SNV missense NA Probably damaging ENOX1 chr13:43872612 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging ENOX1 chr13:43900554 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P286L SNV missense NA - LACC1 chr13:44458022 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C114X SNV stop_gained NA - SIAH3 chr13:46357986 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L68S SNV missense NA Possibly damaging MED4 chr13:48660578 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S375fs Indel frameshift_variant NA - MLNR chr13:49796393 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V190fs Indel frameshift_variant NA - CDADC1 chr13:49841755 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G363V SNV missense NA Probably damaging CDADC1 chr13:49852523 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L155F SNV missense NA Probably damaging CAB39L chr13:49924981 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G644E SNV missense NA Probably damaging SETDB2 chr13:50062744 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R648C SNV missense NA Probably damaging SETDB2 chr13:50062755 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging SETDB2 chr13:50064957 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter425QextX? SNV stop_lost NA - SERPINE3 chr13:51936131 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R376L SNV missense NA Probably damaging VPS36 chr13:52989999 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - MZT1 chr13:73301740 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R114X SNV stop_gained NA - KLF5 chr13:73636077 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R440H SNV missense NA Probably damaging KLF5 chr13:73649969 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S112del Indel disruptive_inframe_deletion NA - KLF12 chr13:74420298 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RP11-29G8.3 chr13:76378424 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D187N SNV missense NA Probably damaging NDFIP2 chr13:80107529 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S190Y SNV missense NA Probably damaging SLITRK5 chr13:88328212 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E470X SNV stop_gained NA - SLITRK5 chr13:88329051 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S677Y SNV missense NA Probably damaging SLITRK5 chr13:88329673 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R691G SNV missense NA Probably damaging SLITRK5 chr13:88329714 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R279X SNV stop_gained NA - GPC5 chr13:92345950 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G508X SNV stop_gained NA - GPC5 chr13:92797203 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W521X SNV stop_gained NA - GPC5 chr13:93518536 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R188W SNV missense NA Probably damaging HS6ST3 chr13:96743678 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - RAP2A chr13:98086845 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W39X SNV stop_gained NA - UBAC2 chr13:99853782 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R138C SNV missense NA Probably damaging GPR183 chr13:99947988 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H237_H239dup Indel disruptive_inframe_insertion NA - ZIC2 chr13:100635007 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L350R SNV missense NA Probably damaging ZIC2 chr13:100635367 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A461_A464del Indel disruptive_inframe_deletion NA Probably damaging ZIC2 chr13:100637714 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G104V SNV missense NA - TEX30 chr13:103419816 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R207Q SNV missense NA - BIVM chr13:103473401 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA Probably damaging ERCC5 chr13:103518716 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E960X SNV stop_gained NA - ERCC5 chr13:103524747 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L1088X SNV stop_gained NA - ERCC5 chr13:103527955 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L99P SNV missense NA Probably damaging ABHD13 chr13:108881862 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S156T SNV missense NA Probably damaging ABHD13 chr13:108882033 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - TEX29 chr13:111973238 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R190del Indel disruptive_inframe_deletion NA - SPACA7 chr13:113088838 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C178fs Indel frameshift_variant NA - ATP4B chr13:114307212 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I135F SNV missense NA Probably damaging OR4M1 chr14:20248884 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L153X SNV stop_gained NA - OR4K5 chr14:20389223 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S7fs Indel frameshift_variant NA - OR4K13 chr14:20502897 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F43fs Indel frameshift_variant NA - OR4N5 chr14:20612019 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H254N SNV missense NA Probably damaging OR11H4 chr14:20711710 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C134F SNV missense NA Probably damaging TMEM55B chr14:20928411 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E61fs Indel frameshift_variant NA Probably damaging TMEM55B chr14:20928987 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L168F SNV missense NA Probably damaging OR6S1 chr14:21109349 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L15dup Indel disruptive_inframe_insertion NA - RNASE4 chr14:21167573 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T16del Indel inframe_deletion NA - RNASE4 chr14:21167575 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F36V SNV missense NA Probably damaging RNASE4 chr14:21167636 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C67R SNV missense NA Probably damaging RNASE4 chr14:21167729 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H40R SNV missense NA Probably damaging RNASE1 chr14:21270109 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I430fs Indel frameshift_variant NA - SUPT16H chr14:21831609 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R19X SNV stop_gained NA - TRAV6 chr14:22236790 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q57X SNV stop_gained NA - TRAV8-1 chr14:22265886 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TRAV12-1 chr14:22309474 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TRAV13-1 chr14:22337092 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S49X SNV stop_gained NA - TRAV13-1 chr14:22337355 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q101X SNV stop_gained NA - TRAV12-2 chr14:22356643 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E74X SNV stop_gained NA - TRAV34 chr14:22675908 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R92G SNV missense NA Probably damaging DAD1 chr14:23044071 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R55C SNV missense NA Probably damaging MRPL52 chr14:23302632 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y459C SNV missense NA - AJUBA chr14:23444094 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P424T SNV missense NA - AJUBA chr14:23444283 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E38D SNV missense NA Probably damaging C14orf119 chr14:23566981 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E44fs Indel frameshift_variant NA - THTPA chr14:24026094 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - DHRS4 chr14:24422999 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - DHRS4 chr14:24423118 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N183K SNV missense NA Probably damaging DHRS4 chr14:24435509 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G28R SNV missense NA - EMC9 chr14:24610432 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A349fs Indel frameshift_variant NA - TINF2 chr14:24709641 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - CIDEB chr14:24777062 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A287V SNV missense NA Probably damaging SDR39U1 chr14:24909311 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging SDR39U1 chr14:24909504 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G1264del Indel inframe_deletion NA - BAZ1A chr14:35231413 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S368X SNV stop_gained NA - SRP54 chr14:35488227 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E149fs Indel frameshift_variant NA - NKX2-8 chr14:37050380 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S110C SNV missense NA Probably damaging NKX2-8 chr14:37050498 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L180H SNV missense NA - GEMIN2 chr14:39594215 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L826fs Indel frameshift_variant NA - RP11-407N17.3 chr14:39771407 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R51G SNV missense NA Probably damaging LRFN5 chr14:42355979 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L125V SNV missense NA Probably damaging LRFN5 chr14:42356201 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G526V SNV missense NA Probably damaging LRFN5 chr14:42360644 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S343del Indel inframe_deletion NA - FSCB chr14:44975161 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H83dup Indel inframe_insertion NA - C14orf28 chr14:45369883 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T237A SNV missense NA Probably damaging PRPF39 chr14:45571871 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y63C SNV missense NA Probably damaging FKBP3 chr14:45599924 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y352X SNV stop_gained NA - POLE2 chr14:50121519 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F261fs Indel frameshift_variant NA - POLE2 chr14:50122533 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R118X SNV stop_gained NA - ATL1 chr14:51057728 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M479del Indel disruptive_inframe_deletion NA - ATL1 chr14:51095063 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D228N SNV missense NA Probably damaging FRMD6 chr14:52174919 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M359fs Indel frameshift_variant NA Probably damaging FRMD6 chr14:52186822 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L819fs Indel frameshift_variant NA - TXNDC16 chr14:52899041 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F482L SNV missense NA Probably damaging DLGAP5 chr14:55636221 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q496X SNV stop_gained NA - FBXO34 chr14:55818594 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L171fs Indel frameshift_variant NA - ACTR10 chr14:58680407 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L125P SNV missense NA Probably damaging PSMA3 chr14:58724686 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D551Y SNV missense NA Probably damaging C14orf39 chr14:60903676 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y90H SNV missense NA Probably damaging RHOJ chr14:63747719 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y172C SNV missense NA Probably damaging RHOJ chr14:63757612 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A363S SNV missense NA Probably damaging PPP2R5E chr14:63851277 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L23fs Indel frameshift_variant NA - ZBTB1 chr14:64988288 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H94del Indel inframe_deletion NA - CHURC1 chr14:65392743 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PLEK2 chr14:67859568 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L84P SNV missense NA Probably damaging PLEK2 chr14:67862257 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q557X SNV stop_gained NA - HEATR4 chr14:73976067 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R158fs Indel frameshift_variant NA - ACOT2 chr14:74036414 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K72fs Indel frameshift_variant NA - ACOT6 chr14:74086132 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G113W SNV missense NA Probably damaging PNMA1 chr14:74180006 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - RP5-1021I20.4 chr14:74388910 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - FCF1 chr14:75180254 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y117H SNV missense NA Probably damaging FCF1 chr14:75190031 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging FCF1 chr14:75199432 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q52X SNV stop_gained NA - DLST chr14:75355839 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G47del Indel inframe_deletion NA - ZC2HC1C chr14:75537413 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L107fs Indel frameshift_variant NA - ZC2HC1C chr14:75537593 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - C14orf1 chr14:76123843 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A158_A164del Indel disruptive_inframe_deletion NA - IRF2BPL chr14:77493644 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A161_A163dup Indel disruptive_inframe_insertion NA - IRF2BPL chr14:77493647 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R285X SNV stop_gained NA - VIPAS39 chr14:77904212 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R202C SNV missense NA - VIPAS39 chr14:77910663 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D668Y SNV missense NA Probably damaging STON2 chr14:81743653 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I631T SNV missense NA Probably damaging STON2 chr14:81743763 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E484Q SNV missense NA Probably damaging STON2 chr14:81744205 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R335W SNV missense NA Probably damaging FLRT2 chr14:86088861 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y290H SNV missense NA Probably damaging GPR65 chr14:88478059 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R148H SNV missense NA Probably damaging KCNK13 chr14:90650563 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A45fs Indel frameshift_variant NA - PSMC1 chr14:90726532 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C58R SNV missense NA Probably damaging PSMC1 chr14:90729679 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G226C SNV missense NA Probably damaging PSMC1 chr14:90731495 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V168F SNV missense NA Probably damaging SLC24A4 chr14:92909080 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q299X SNV stop_gained NA - SLC24A4 chr14:92920258 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P537L SNV missense NA Probably damaging SLC24A4 chr14:92958081 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E229dup Indel disruptive_inframe_insertion NA - CHGA chr14:93397919 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - ITPK1 chr14:93408244 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E29X SNV stop_gained NA - RP11-371E8.4 chr14:93652705 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R310C SNV missense NA Probably damaging UBR7 chr14:93685675 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S97del Indel inframe_deletion NA - IFI27L2 chr14:94594237 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C158X SNV stop_gained NA - BDKRB1 chr14:96730493 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A39V SNV missense NA - GSKIP chr14:96848700 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T154M SNV missense NA Probably damaging AK7 chr14:96875241 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H190R SNV missense NA Probably damaging AK7 chr14:96887229 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A99fs Indel frameshift_variant NA - C14orf177 chr14:99183526 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L150S SNV missense NA Probably damaging CYP46A1 chr14:100172989 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging CYP46A1 chr14:100182494 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L361V SNV missense NA Probably damaging CYP46A1 chr14:100188308 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E237X SNV stop_gained NA - BEGAIN chr14:101005379 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - DLK1 chr14:101195405 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C113S SNV missense NA Probably damaging DLK1 chr14:101198453 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C212S SNV missense NA Probably damaging DLK1 chr14:101200715 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E285X SNV stop_gained NA - ZNF839 chr14:102792886 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y90X SNV stop_gained NA - ANKRD9 chr14:102973957 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q12fs Indel frameshift_variant NA - AMN chr14:103389059 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - AMN chr14:103395280 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W146X SNV stop_gained NA - EXOC3L4 chr14:103570642 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - EXOC3L4 chr14:103574855 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R338X SNV stop_gained NA - XRCC3 chr14:104165164 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q131X SNV stop_gained NA - PLD4 chr14:105395171 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F293S SNV missense NA Probably damaging BTBD6 chr14:105716429 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T304I SNV missense NA Probably damaging BTBD6 chr14:105716462 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E664del Indel inframe_deletion NA - MTA1 chr14:105936318 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CRIP1 chr14:105954806 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - C14orf80 chr14:105958596 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - HERC2P3 chr15:20588710 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D422H SNV missense NA Probably damaging MTMR10 chr15:31240618 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA Probably damaging MTMR10 chr15:31253097 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D99N SNV missense NA Probably damaging MTMR10 chr15:31267170 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G71del Indel disruptive_inframe_deletion NA - EMC7 chr15:34393826 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F158fs Indel frameshift_variant NA - PGBD4 chr15:34395202 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R179C SNV missense NA Probably damaging LPCAT4 chr15:34656451 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - ACTC1 chr15:35087008 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - C15orf41 chr15:36989522 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R18G SNV missense NA Probably damaging SPRED1 chr15:38591593 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H91R SNV missense NA Probably damaging SPRED1 chr15:38614506 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R403Q SNV missense NA Probably damaging SPRED1 chr15:38643738 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T69I SNV missense NA Probably damaging SRP14 chr15:40330487 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q285X SNV stop_gained NA - KNSTRN chr15:40685424 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P491fs Indel frameshift_variant NA - BAHD1 chr15:40754147 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R629W SNV missense NA Probably damaging BAHD1 chr15:40756129 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q493fs Indel frameshift_variant NA - RPUSD2 chr15:40866299 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D508E SNV missense NA Probably damaging RPUSD2 chr15:40866346 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R172del Indel disruptive_inframe_deletion NA - ZFYVE19 chr15:41102109 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P244L SNV missense NA Probably damaging ZFYVE19 chr15:41102860 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q364X SNV stop_gained NA - TYRO3 chr15:41860543 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - TYRO3 chr15:41865876 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D44H SNV missense NA Probably damaging LRRC57 chr15:42840397 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V155F SNV missense NA Probably damaging CCNDBP1 chr15:43482557 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K366R SNV missense NA Probably damaging PDIA3 chr15:44060755 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E493fs Indel frameshift_variant NA Probably damaging PDIA3 chr15:44063374 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T152S SNV missense NA Probably damaging CASC4 chr15:44620955 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S328X SNV stop_gained NA - CASC4 chr15:44673085 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter52RextX? SNV stop_lost NA - B2M chr15:45007718 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R344X SNV stop_gained NA - DUOXA1 chr15:45410229 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K88E SNV missense NA Probably damaging DUOXA1 chr15:45413363 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SLC30A4 chr15:45779724 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K143I SNV missense NA - BLOC1S6 chr15:45898606 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F332C SNV missense NA Probably damaging SQRDL chr15:45974806 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R99C SNV missense NA Probably damaging MYEF2 chr15:48460903 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - DUT chr15:48624451 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F204S SNV missense NA Probably damaging DUT chr15:48633540 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G71fs Indel frameshift_variant NA - EID1 chr15:49170582 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F235del Indel disruptive_inframe_deletion NA - CYP19A1 chr15:51510776 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y77C SNV missense NA Probably damaging CYP19A1 chr15:51529122 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A475T SNV missense NA Probably damaging GLDN chr15:51696718 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D178G SNV missense NA Probably damaging LYSMD2 chr15:52017059 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N99K SNV missense NA Probably damaging LYSMD2 chr15:52017295 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E44K SNV missense NA Probably damaging ARPP19 chr15:52849392 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R409C SNV missense NA Probably damaging ONECUT1 chr15:53049925 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y14C SNV missense NA Probably damaging RSL24D1 chr15:55489048 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L375fs Indel frameshift_variant NA - CCPG1 chr15:55652846 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T64M SNV missense NA Probably damaging GTF2A2 chr15:59934448 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A90T SNV missense NA Probably damaging C2CD4A chr15:62360080 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y326C SNV missense NA benign CSNK1G1 chr15:64496662 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L594fs Indel frameshift_variant NA - PIF1 chr15:65108859 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P348S SNV missense NA Probably damaging PIF1 chr15:65113410 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W378fs Indel frameshift_variant NA - PLEKHO2 chr15:65157745 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L110V SNV missense NA Probably damaging SPG21 chr15:65267064 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - PARP16 chr15:65563411 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R477X SNV stop_gained NA - VWA9 chr15:65871982 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T466fs Indel frameshift_variant NA - VWA9 chr15:65874308 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N284fs Indel frameshift_variant NA - VWA9 chr15:65890663 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E142fs Indel frameshift_variant NA - SLC24A1 chr15:65916833 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K66E SNV missense NA Probably damaging TIPIN chr15:66644483 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G142R SNV missense NA - SKOR1 chr15:68118590 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N241del Indel inframe_deletion NA - SKOR1 chr15:68118885 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SKOR1 chr15:68123154 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M280T SNV missense NA Probably damaging FEM1B chr15:68582535 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging FEM1B chr15:68582826 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H8fs Indel frameshift_variant NA - ANP32A chr15:69113065 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R7W SNV missense NA Probably damaging GLCE chr15:69548164 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R185Q SNV missense NA Probably damaging GLCE chr15:69548699 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R436C SNV missense NA Probably damaging LARP6 chr15:71124561 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E309del Indel inframe_deletion NA Probably damaging LARP6 chr15:71124939 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R143W SNV missense NA Probably damaging LARP6 chr15:71125440 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K171fs Indel frameshift_variant NA - THSD4 chr15:71535031 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y639X SNV stop_gained NA - THSD4 chr15:72037455 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K146fs Indel frameshift_variant NA - MYO9A chr15:72338464 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y74C SNV missense NA Probably damaging GRAMD2 chr15:72460879 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R130X SNV stop_gained NA - CELF6 chr15:72597093 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - RP11-106M3.2 chr15:72668060 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y214fs Indel frameshift_variant NA - TMEM202 chr15:72700048 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V849fs Indel frameshift_variant NA - HCN4 chr15:73615888 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - HCN4 chr15:73617637 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - HCN4 chr15:73624471 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R393C SNV missense NA Probably damaging NPTN chr15:73854271 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I478fs Indel frameshift_variant NA - CD276 chr15:74000726 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - CD276 chr15:74003512 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W276X SNV stop_gained NA - SCAMP2 chr15:75137721 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D370Y SNV missense NA Probably damaging C15orf39 chr15:75499497 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L376fs Indel frameshift_variant NA Probably damaging C15orf39 chr15:75499515 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E974fs Indel frameshift_variant NA Probably damaging C15orf39 chr15:75503231 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R90X SNV stop_gained NA - NRG4 chr15:76248336 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A187E SNV missense NA Probably damaging C15orf27 chr15:76463380 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E276X SNV stop_gained NA - C15orf27 chr15:76484366 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - TSPAN3 chr15:77348129 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S63_E64insF Indel inframe_insertion NA - HMG20A chr15:77756680 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter43RextX? SNV stop_lost NA - IDH3A chr15:78449951 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L210P SNV missense NA Probably damaging IDH3A chr15:78455866 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A355T SNV missense NA Probably damaging ACSBG1 chr15:78474319 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - WDR61 chr15:78584957 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D76fs Indel frameshift_variant NA - HYKK chr15:78805654 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G1441fs Indel frameshift_variant NA - ADAMTS7 chr15:79056993 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W830X SNV stop_gained NA - ADAMTS7 chr15:79063532 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W619fs Indel frameshift_variant NA - ADAMTS7 chr15:79066986 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E389K SNV missense NA Probably damaging ADAMTS7 chr15:79082044 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C15fs Indel frameshift_variant NA - FAM154B chr15:82555260 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E109fs Indel frameshift_variant NA - HDGFRP3 chr15:83826301 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - EFTUD1P1 chr15:84784898 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - EFTUD1P1 chr15:84789841 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H151Y SNV missense NA Probably damaging WDR73 chr15:85189481 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R321C SNV missense NA Probably damaging ALPK3 chr15:85382261 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A692fs Indel frameshift_variant NA - AGBL1 chr15:86823005 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P734L SNV missense NA Probably damaging AGBL1 chr15:86838604 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N798H SNV missense NA Probably damaging AGBL1 chr15:86940752 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P467H SNV missense NA Probably damaging NTRK3 chr15:88576273 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G228fs Indel frameshift_variant NA - MESP2 chr15:90320265 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y251X SNV stop_gained NA - MESP2 chr15:90320341 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q110X SNV stop_gained NA - GDPGP1 chr15:90784468 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G594R SNV missense NA Probably damaging CRTC3 chr15:91185292 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E49G SNV missense NA Probably damaging SV2B chr15:91769639 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D164_L165dup Indel inframe_insertion NA - SLCO3A1 chr15:92459530 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L141V SNV missense NA Probably damaging FAM174B chr15:93173499 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R1137X SNV stop_gained NA - CHD2 chr15:93528899 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R224L SNV missense NA Probably damaging ARRDC4 chr15:98512398 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V39fs Indel frameshift_variant NA - FAM169B chr15:99023895 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G1215X SNV stop_gained NA - SYNM chr15:99672211 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A113fs Indel frameshift_variant NA - LYSMD4 chr15:100269885 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S615fs Indel frameshift_variant NA - LINS chr15:101109873 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P120S SNV missense NA Possibly damaging ASB7 chr15:101169788 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G264E SNV missense NA Probably damaging CHSY1 chr15:101775312 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R107fs Indel frameshift_variant NA Probably damaging CHSY1 chr15:101791342 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I136T SNV missense NA Probably damaging SNRPA1 chr15:101827165 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G243D SNV missense NA Probably damaging TM2D3 chr15:102182698 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L66R SNV missense NA Probably damaging OR4F6 chr15:102346119 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C189F SNV missense NA Probably damaging OR4F6 chr15:102346488 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R241fs Indel frameshift_variant NA - RGS11 chr16:321425 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G72V SNV missense NA Possibly damaging RAB40C chr16:668211 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K258X SNV stop_gained NA - RAB40C chr16:677548 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter227WextX? SNV stop_lost NA - TMEM204 chr16:1605027 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S120C SNV missense NA Probably damaging HN1L chr16:1741924 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K154fs Indel frameshift_variant NA - SPSB3 chr16:1828165 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P126Q SNV missense NA Probably damaging NOXO1 chr16:2030407 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W33X SNV stop_gained NA - SYNGR3 chr16:2042663 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S62X SNV stop_gained NA - SYNGR3 chr16:2042749 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C245X SNV stop_gained NA - DNASE1L2 chr16:2287911 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter156YextX? SNV stop_lost NA - ATP6V0C chr16:2569746 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P114T SNV missense NA Probably damaging PRSS27 chr16:2764234 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - ZG16B chr16:2881858 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q7X SNV stop_gained NA - KREMEN2 chr16:3014540 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L189P SNV missense NA Probably damaging PKMYT1 chr16:3025626 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H363L SNV missense NA Probably damaging ZNF213 chr16:3191056 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H423R SNV missense NA Probably damaging ZNF213 chr16:3191236 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - ZNF200 chr16:3282546 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M73fs Indel frameshift_variant NA - ZNF200 chr16:3283537 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA Probably damaging ZNF75A chr16:3363077 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C166Y SNV missense NA Probably damaging ZNF75A chr16:3367475 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H183R SNV missense NA Probably damaging ZNF75A chr16:3367526 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H267Q SNV missense NA Probably damaging ZNF75A chr16:3367779 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S148dup Indel disruptive_inframe_insertion NA - GLIS2 chr16:4384892 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CORO7 chr16:4412134 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y163X SNV stop_gained NA - SEPT12 chr16:4833955 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P128L SNV missense NA Probably damaging SEPT12 chr16:4834061 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L457P SNV missense NA Probably damaging GLYR1 chr16:4861716 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V57fs Indel frameshift_variant NA - DEXI chr16:11035694 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - RMI2 chr16:11444570 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N128Y SNV missense NA - RMI2 chr16:11444585 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E48del Indel inframe_deletion NA - SNN chr16:11770053 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T386K SNV missense NA Probably damaging PARN chr16:14676073 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L214F SNV missense NA Probably damaging BFAR chr16:14748926 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A345fs Indel frameshift_variant NA Probably damaging BFAR chr16:14758800 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q1122fs Indel frameshift_variant NA - NOMO1 chr16:14982989 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C334fs Indel frameshift_variant NA - NPIPA5 chr16:15457567 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q1143_A1144del Indel disruptive_inframe_deletion NA - ABCC6 chr16:16256922 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E247del Indel inframe_deletion NA - ABCC6 chr16:16302637 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - Indel splice_donor_variant NA - ABCC6P1 chr16:18586475 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E79X SNV stop_gained NA - KNOP1 chr16:19726123 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V195A SNV missense NA Probably damaging IQCK chr16:19775413 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D295H SNV missense NA Probably damaging GPRC5B chr16:19883363 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A229D SNV missense NA Probably damaging GPRC5B chr16:19883560 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R33fs Indel frameshift_variant NA Probably damaging GPRC5B chr16:19884146 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q197K SNV missense NA Probably damaging DCUN1D3 chr16:20871534 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E158X SNV stop_gained NA - HS3ST4 chr16:25704210 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L238S SNV missense NA - KDM8 chr16:27225006 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - KDM8 chr16:27225068 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G309E SNV missense NA - KDM8 chr16:27227279 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q271del Indel disruptive_inframe_deletion NA - NPIPB6 chr16:28354390 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N335fs Indel frameshift_variant NA - EIF3CL chr16:28403108 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I415N SNV missense NA Probably damaging NFATC2IP chr16:28975168 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - QPRT chr16:29706200 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - QPRT chr16:29706239 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - QPRT chr16:29706443 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D222E SNV missense NA Probably damaging QPRT chr16:29708433 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P269L SNV missense NA Probably damaging ASPHD1 chr16:29913098 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C324Y SNV missense NA Probably damaging ASPHD1 chr16:29916194 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter99YextX? SNV stop_lost NA - TMEM219 chr16:29982853 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R107C SNV missense NA Probably damaging PPP4C chr16:30094730 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R141C SNV missense NA Probably damaging PPP4C chr16:30094832 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H212fs Indel frameshift_variant NA - SLX1A chr16:30208343 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W47X SNV stop_gained NA - DCTPP1 chr16:30440450 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q405X SNV stop_gained NA - ZNF764 chr16:30566529 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W363X SNV stop_gained NA - ZNF764 chr16:30566654 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W43X SNV stop_gained NA - ZNF785 chr16:30596805 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E566fs Indel frameshift_variant NA - FBXL19 chr16:30958057 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - TRIM72 chr16:31235645 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K331del Indel disruptive_inframe_deletion NA - ITGAM chr16:31286999 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - ITGAM chr16:31287990 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C107F SNV missense NA - ORC6 chr16:46726418 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F712fs Indel frameshift_variant NA - MYLK3 chr16:46744681 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - NETO2 chr16:47143393 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G168R SNV missense NA Probably damaging NETO2 chr16:47156803 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D189H SNV missense NA Probably damaging AKTIP chr16:53528288 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S85C SNV missense NA Probably damaging IRX5 chr16:54966414 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R122G SNV missense NA Probably damaging IRX5 chr16:54966524 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L186W SNV missense NA Probably damaging LPCAT2 chr16:55563774 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q236X SNV stop_gained NA - SLC6A2 chr16:55719116 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y271fs Indel frameshift_variant NA - SLC6A2 chr16:55725854 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A312T SNV missense NA Probably damaging SLC6A2 chr16:55727937 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S122X SNV stop_gained NA - MT1E chr16:56660714 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E70K SNV missense NA Probably damaging FAM192A chr16:57206706 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T93del Indel inframe_deletion NA - ARL2BP chr16:57283753 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q95fs Indel frameshift_variant NA - ARL2BP chr16:57283763 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E242del Indel inframe_deletion NA - DOK4 chr16:57507824 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G188D SNV missense NA Probably damaging DOK4 chr16:57508741 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q261X SNV stop_gained NA - TEPP chr16:58019398 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A128D SNV missense NA Probably damaging CMTM3 chr16:66643417 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A40P SNV missense NA Probably damaging CA7 chr16:66881010 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging CA7 chr16:66885441 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L253P SNV missense NA Probably damaging CA7 chr16:66887364 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N283fs Indel frameshift_variant NA - CDH16 chr16:66947448 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter176GextX? SNV stop_lost NA - CDH16 chr16:66949203 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P172fs Indel frameshift_variant NA - CBFB chr16:67132629 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A29fs Indel frameshift_variant NA Probably damaging FBXL8 chr16:67195773 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L137P SNV missense NA Probably damaging FBXL8 chr16:67197008 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E72G SNV missense NA Probably damaging E2F4 chr16:67226743 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P168S SNV missense NA Probably damaging E2F4 chr16:67228351 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W119X SNV stop_gained NA - E2F4 chr16:67228637 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W610X SNV stop_gained NA - PLEKHG4 chr16:67318753 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y1092X SNV stop_gained NA - PLEKHG4 chr16:67322125 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q160X SNV stop_gained NA - ATP6V0D1 chr16:67478557 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L187fs Indel frameshift_variant NA - LCAT chr16:67976455 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E240V SNV missense NA Probably damaging SLC7A6OS chr16:68336364 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A22T SNV missense NA Probably damaging SLC7A6OS chr16:68344766 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S587X SNV stop_gained NA - CDH3 chr16:68721604 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V637fs Indel frameshift_variant NA - CDH3 chr16:68725735 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RP11-354M1.2 chr16:68849563 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R88T SNV missense NA Probably damaging CYB5B chr16:69481141 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S199fs Indel frameshift_variant NA - NFAT5 chr16:69681266 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R320C SNV missense NA Probably damaging NFAT5 chr16:69687284 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging NFAT5 chr16:69724842 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q1271_Q1273del Indel disruptive_inframe_deletion NA Probably damaging NFAT5 chr16:69727529 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G160R SNV missense NA Probably damaging NQO1 chr16:69746972 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - IL34 chr16:70690926 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K411fs Indel frameshift_variant NA - CMTR2 chr16:71318587 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T196A SNV missense NA - CMTR2 chr16:71319238 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T471I SNV missense NA Probably damaging ZNF23 chr16:71482516 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R818Q SNV missense NA Probably damaging AP1G1 chr16:71767046 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C183R SNV missense NA Probably damaging AP1G1 chr16:71805146 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R347X SNV stop_gained NA - ZNF821 chr16:71894121 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R159G SNV missense NA Probably damaging DHODH chr16:72050963 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K141fs Indel frameshift_variant NA - TXNL4B chr16:72120565 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R886X SNV stop_gained NA - PMFBP1 chr16:72157497 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M855I SNV missense NA Probably damaging PMFBP1 chr16:72158705 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q382X SNV stop_gained NA - NPIPB15 chr16:74425790 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q354X SNV stop_gained NA - TERF2IP chr16:75690369 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F202S SNV missense NA Probably damaging CLEC3A chr16:78064722 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E31V SNV missense NA Probably damaging MAF chr16:79633708 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - CDYL2 chr16:80638445 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A287E SNV missense NA Probably damaging CDYL2 chr16:80654810 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R108X SNV stop_gained NA - CDYL2 chr16:80718729 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E136X SNV stop_gained NA - ATMIN chr16:81075030 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S438X SNV stop_gained NA - ATMIN chr16:81077416 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D582V SNV missense NA Probably damaging ATMIN chr16:81077848 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E154K SNV missense NA Probably damaging GCSH chr16:81116533 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D19H SNV missense NA Probably damaging COTL1 chr16:84651466 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A203P SNV missense NA Probably damaging FAM92B chr16:85135864 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D196E SNV missense NA - EMC8 chr16:85813359 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E104Q SNV missense NA Probably damaging FOXF1 chr16:86544485 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q840X SNV stop_gained NA - ZCCHC14 chr16:87445398 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V804fs Indel frameshift_variant NA - ZCCHC14 chr16:87445504 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H130Q SNV missense NA Probably damaging CA5A chr16:87938461 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C155Y SNV missense NA Probably damaging RNF166 chr16:88765455 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y150X SNV stop_gained NA - PABPN1L chr16:88931980 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - RPL13 chr16:89628147 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S136fs Indel frameshift_variant NA - DPEP1 chr16:89702973 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P280fs Indel frameshift_variant NA - RNMTL1 chr17:694880 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter421GextX? SNV stop_lost NA - RNMTL1 chr17:695307 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S519L SNV missense NA Probably damaging ABR chr17:959280 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E249X SNV stop_gained NA - PITPNA chr17:1437416 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N176fs Indel frameshift_variant NA - PITPNA chr17:1438743 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K300del Indel disruptive_inframe_deletion NA - RILP chr17:1551171 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L792fs Indel frameshift_variant NA - SMYD4 chr17:1684616 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A555P SNV missense NA Probably damaging SMYD4 chr17:1690773 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W73X SNV stop_gained NA - OVCA2 chr17:1945932 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q195fs Indel frameshift_variant NA - OR3A2 chr17:3181646 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G282fs Indel frameshift_variant NA - OR3A3 chr17:3324701 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R11X SNV stop_gained NA - SPATA22 chr17:3372589 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA - ASPA chr17:3392609 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G42fs Indel frameshift_variant NA - EMC6 chr17:3572558 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA - SPNS2 chr17:4436270 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A459T SNV missense NA Probably damaging SPNS2 chr17:4439401 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q488X SNV stop_gained NA - SPNS2 chr17:4439576 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S75Y SNV missense NA Probably damaging ARRB2 chr17:4619770 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.N41fs Indel frameshift_variant NA - MED11 chr17:4635104 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - VMO1 chr17:4689645 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q398X SNV stop_gained NA - CHRNE chr17:4802520 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.H336Q SNV missense NA Probably damaging CHRNE chr17:4802787 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T297I SNV missense NA Probably damaging CHRNE chr17:4804115 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T297S SNV missense NA Probably damaging CHRNE chr17:4804116 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R146C SNV missense NA Probably damaging SLC25A11 chr17:4842083 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P1019S SNV missense NA Probably damaging CAMTA2 chr17:4873654 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q445fs Indel frameshift_variant NA Probably damaging CAMTA2 chr17:4883350 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R154H SNV missense NA Probably damaging CAMTA2 chr17:4885403 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E53fs Indel frameshift_variant NA - ZFP3 chr17:4994951 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R622H SNV missense NA Possibly damaging DHX33 chr17:5347784 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I525fs Indel frameshift_variant NA Possibly damaging DHX33 chr17:5353678 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.C518Y SNV missense NA Probably damaging DHX33 chr17:5353698 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L446P SNV missense NA Probably damaging DHX33 chr17:5356959 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q341X SNV stop_gained NA - DHX33 chr17:5359331 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - DERL2 chr17:5384615 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F97fs Indel frameshift_variant NA - DERL2 chr17:5384651 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - DERL2 chr17:5389479 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G436A SNV missense NA Probably damaging BCL6B chr17:6930390 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W275R SNV missense NA Probably damaging ASGR1 chr17:7077031 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Ter162GextX? SNV stop_lost NA Probably damaging ASGR1 chr17:7077278 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G116S SNV missense NA Probably damaging GABARAP chr17:7144181 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y109S SNV missense NA Probably damaging GABARAP chr17:7144201 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV protein_protein_contact NA Probably damaging GABARAP chr17:7144208 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S15P SNV missense NA - C17orf61-PLSCR3 chr17:7307361 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.W311X SNV stop_gained NA - C17orf74 chr17:7330243 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A110fs Indel frameshift_variant NA - TMEM102 chr17:7339623 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P143T SNV missense NA Probably damaging CHRNB1 chr17:7350435 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P217L SNV missense NA Probably damaging EIF4A1 chr17:7480687 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.G49fs Indel frameshift_variant NA - MPDU1 chr17:7489089 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S453L SNV missense NA Probably damaging FXR2 chr17:7496472 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K8del Indel disruptive_inframe_deletion NA - ATP1B2 chr17:7554852 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y48C SNV missense NA Probably damaging ATP1B2 chr17:7556722 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging ATP1B2 chr17:7557368 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q137X SNV stop_gained NA - ATP1B2 chr17:7557432 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.D228Y SNV missense NA Probably damaging WRAP53 chr17:7604098 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P63A SNV missense NA Probably damaging EFNB3 chr17:7611340 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E149K SNV missense NA Probably damaging EFNB3 chr17:7611782 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q175X SNV stop_gained NA - KDM6B chr17:7749784 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A1482G SNV missense NA Probably damaging KDM6B chr17:7755631 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E24V SNV missense NA Probably damaging CYB5D1 chr17:7761523 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA Probably damaging CYB5D1 chr17:7761526 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R136G SNV missense NA Probably damaging CYB5D1 chr17:7762092 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R165P SNV missense NA Probably damaging CYB5D1 chr17:7762737 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - KCNAB3 chr17:7828414 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1166R SNV missense NA Probably damaging PER1 chr17:8045226 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_acceptor_variant NA Probably damaging PER1 chr17:8050084 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E143del Indel disruptive_inframe_deletion NA - C17orf59 chr17:8093030 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T561A SNV missense NA Probably damaging ARHGEF15 chr17:8219443 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T35I SNV missense NA Probably damaging MFSD6L chr17:8702335 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K195Q SNV missense NA Probably damaging NTN1 chr17:8926273 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q443H SNV missense NA Probably damaging NTN1 chr17:9083245 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Y246H SNV missense NA Probably damaging USP43 chr17:9570064 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.V398fs Indel frameshift_variant NA Probably damaging USP43 chr17:9586218 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L999fs Indel frameshift_variant NA Probably damaging USP43 chr17:9631925 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q140X SNV stop_gained NA - GLP2R chr17:9745847 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - GAS7 chr17:9821317 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E1514del Indel inframe_deletion NA - MYH2 chr17:10428660 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.K1300X SNV stop_gained NA - MYH2 chr17:10430347 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.I736fs Indel frameshift_variant NA - MYH2 chr17:10436921 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R207T SNV missense NA Probably damaging SCO1 chr17:10595224 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q18X SNV stop_gained NA - SCO1 chr17:10600773 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.L4dup Indel inframe_insertion NA - SCO1 chr17:10600812 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A168dup Indel disruptive_inframe_insertion NA - HS3ST3B1 chr17:14205335 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q114fs Indel frameshift_variant NA - TVP23C-CDRT4 chr17:15449218 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.M1? SNV start_lost NA - TVP23C chr17:15457044 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S410fs Indel frameshift_variant NA - RP11-385D13.1 chr17:15532396 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.S104G SNV missense NA Probably damaging RASD1 chr17:17398975 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.F150fs Indel frameshift_variant NA - PEMT chr17:17415838 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E9K SNV missense NA Probably damaging LRRC48 chr17:17880937 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.A239T SNV missense NA Probably damaging LRRC48 chr17:17898316 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P649L SNV missense NA Probably damaging LLGL1 chr17:18141422 Tolerated Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R668P SNV missense NA Probably damaging LLGL1 chr17:18141479 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P839S SNV missense NA Probably damaging LLGL1 chr17:18144777 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.R934C SNV missense NA Probably damaging LLGL1 chr17:18145231 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.Q261X SNV stop_gained NA - ZNF286B chr17:18566038 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.E101del Indel inframe_deletion NA - TRIM16L chr17:18631007 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.T431fs Indel frameshift_variant NA - FBXW10 chr17:18659435 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - PRPSAP2 chr17:18793191 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - SLC47A1 chr17:19452991 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish - SNV splice_donor_variant NA - FAM27L chr17:21825576 - Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human All Exon v.2 Kit Illumina GAII + Illumina HiSeq 2000 and HiSeq 2500 4877 6203 sporadic cases and controls Sporadic Swedish p.P62L SNV missense NA benign WSB1 chr17:25628958 Damaging Genovese 2016 27694994 Agilent SureSelect Human All Exon Kit + Agilent SureSelect Human Al